<Clone: Contig-U10354-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U10354-1

Dictyostelium discoideum cDNA Project Home

Assembled

Chromosomal Location of Contig-U10354-1

< more Chromosomal info >

Chromosome Number 2
Length 8467578
Start Poin 5,548,008
End Point 5,549,230
Strand PLUS

Sequence Contig-U10354-1

AAATATTATA AAATGTCATA TATGATCAAT TCAGCTAAAC AAAAAAGGAA
TGAAGATGAA ATTATTAATT TCATCAGTAA TAGTTCATTA AAGGATAGAT
CTTTATTGTT ATTATATATT TCAAAATTAT CATCAAATGG TTTATATATT
CCAAGTATTA GTTCATTAAT TAATTTTTGT GAAGAAATAA TAATTTTAAA
AGATACAATT GAAACTCAAA ATGAAGATTT AGTTGCAAAA TGGTATTGGG
CAGATGATGA TATGAATGGA CATCAAACAG ATTATAAACC ATATAGTTTT
GAAACTTGTA AAAGATTAGA AAAAGCAAGA AAGAATAAAA TTGAATATTG
TAGAATTAGT GATGTCCATT TCGTTGATAC AGTTTCACTC GCACAAATTA
GATATGATGA TAAAGGTAGA GTTAGACTTG TTAGAAGAGA TCCACCAAAA
TATAAAGAAA ATGAAATTTT ACCACAACAA CAACAACAAC CAATCACAAC
TGAAAATAAT AATAATAATG ATAATGACAA TAATAAAGAT GATGAAATTT
GTTCAATGGT ATTGGGCAGA TGATGGACCA AGAGGACATC AAGATGTTTG
GGTTAAATAT AGTGAAGATT TATCAAAACT AATGGAAGCA AGTTATCAAA
ATAACAATAG AATCAATAGT GAATTAATTC CAATTAAAGT TGATGAAGAA
CGTTTCGTCG ATACAAAGAG AATGCTACAA GTTAGATTTG ACTCTAGATT
TAGAGTAAGA TTAGTTAAAA GGGATACAAA AACATTGGCA CCACCAAAAG
GATCTAGTGG TAGTAGTGCT CCATCTACTC CATCAAAATC AACAATGGAA
AAACTTTTTG GACTCATGAC ACTTCAATCA CCAAAGAAAT CAACACCAAA
AAAACCAAAT CAAAAAATAC CATTTGTTGA TACTTCAATA AATTTAAAAA
CATTGCCAAA TGATGCTTTA TTAGATATTT TAACAATTGA TGAAATTAAA
TACCTAATGA AAAAATTAGT AATTGCCATA CCAGATTCAT CCAAATCAAA
TGCAGATCAA ACACCAACAA ATTCATCTTT AAAAAAATTT ACAATCTCAA
CTTTTAAATC AACTTTTATT CTTAATAATA ATCAAATATT ATCAAAAATT
GTATTAAAAA AATAAAATAA AAAAATAAAG AAATCAAAAA AAAAAAAAAA
AAAAAAAAAA AAAAAAAAAA AA

Translated Amino Acid Sequence Contig-U10354-1

<All Frames> 
niikchi*siqlnkkgmkmkllissvivh*ridlycyyifqnyhqmvyifqvlvh*lifv
kk**f*kiqlklkmki*lqngigqmmi*mdikqiinhivlklvkd*KKQERIKLNIVELV
MSISLIQFHSHKLDMMIKVELDLLEEIHQNIKKMKFYHNNNNNQSQLKIIIIMIMTIIKM
MKFVQWYWADDGPRGHQDVWVKYSEDLSKLMEASYQNNNRINSELIPIKVDEERFVDTKR
MLQVRFDSRFRVRLVKRDTKTLAPPKGSSGSSAPSTPSKSTMEKLFGLMTLQSPKKSTPK
KPNQKIPFVDTSINLKTLPNDALLDILTIDEIKYLMKKLVIAIPDSSKSNADQTPTNSSL
KKFTISTFKSTFILNNNQILSKIVLKK*nkkikkskkkkkkkkkkkk


Homology Contig-U10354-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U10354-1 (Contig-U10354-1Q) /CSM_Contig/Conti...   938  0.0
Contig-U14749-1 (Contig-U14749-1Q) /CSM_Contig/Conti...    38  0.022
Contig-U12842-1 (Contig-U12842-1Q) /CSM_Contig/Conti...    38  0.022
Contig-U12455-1 (Contig-U12455-1Q) /CSM_Contig/Conti...    38  0.022
Contig-U11311-1 (Contig-U11311-1Q) /CSM_Contig/Conti...    38  0.022
Contig-U08180-1 (Contig-U08180-1Q) /CSM_Contig/Conti...    38  0.022
Contig-U13870-1 (Contig-U13870-1Q) /CSM_Contig/Conti...    36  0.086
Contig-U13598-1 (Contig-U13598-1Q) /CSM_Contig/Conti...    36  0.086
Contig-U11411-1 (Contig-U11411-1Q) /CSM_Contig/Conti...    36  0.086
Contig-U12260-1 (Contig-U12260-1Q) /CSM_Contig/Conti...    30  5.3


Homology Contig-U10354-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(BJ433179) Dictyostelium discoideum cDNA clone:ddv21c04, 3' ...   698   0.0    3
(BJ435653) Dictyostelium discoideum cDNA clone:ddv27e23, 3' ...   698   0.0    3
(BJ414967) Dictyostelium discoideum cDNA clone:ddv21c04, 5' ...   938   0.0    2
(BJ432225) Dictyostelium discoideum cDNA clone:ddv18g01, 3' ...   672   0.0    2
(AU075041) Dictyostelium discoideum slug cDNA, clone SSM793.      476   e-129  1
(C93399) Dictyostelium discoideum slug cDNA, clone SSM793.        323   2e-98  2
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp...    36   1e-04  24
(AF222894) Ureaplasma parvum serovar 3 str. ATCC 700970, com...    36   1e-04  24
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734...    34   3e-04  18
(AL445563) Mycoplasma pulmonis (strain UAB CTIP) complete ge...    36   0.004  12


Homology Contig-U10354-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


AC116960_36(AC116960|pid:none) Dictyostelium discoideum chromoso...   360   6e-98
AC116956_27(AC116956|pid:none) Dictyostelium discoideum chromoso...    57   1e-06
AY223131_1(AY223131|pid:none) Schistosoma japonicum clone ZZD144...    42   0.034
AC117176_59(AC117176|pid:none) Dictyostelium discoideum chromoso...    34   9.2


<Clone: Contig-U10354-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Project Home