Homology Contig-U10067-1 vs Protein
Query= Contig-U10067-1 (Contig-U10067-1Q) /CSM_Contig/Contig-U10067-1Q.Seq.d
(789 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S44208(S44208) extracellular matrix protein B - Dictyostelium mi... 73 5e-16
(P11976) RecName: Full=Prestalk protein; AltName: Full=Extracell... 77 1e-15
A26838(A26838)prestalk protein precursor - slime mold (Dictyoste... 76 1e-15
AC117072_61(AC117072|pid:none) Dictyostelium discoideum chromoso... 70 5e-14
AC116984_103(AC116984|pid:none) Dictyostelium discoideum chromos... 79 2e-13
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor; 60 3e-12
A27020(A27020)DIF-induced prestalk pDd63 protein precursor - sli... 69 8e-11
(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor; 65 2e-09
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor; 62 3e-08
(Q54C31) RecName: Full=Protein psiR; Flags: Precursor; 54 4e-06
(Q54P69) RecName: Full=Protein psiM; Flags: Precursor; 54 4e-06
(Q1ZXC5) RecName: Full=Protein psiC; Flags: Precursor; 54 6e-06
(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor; &AC11695... 54 6e-06
(Q557E9) RecName: Full=Protein psiG; Flags: Precursor; &AC11568... 54 7e-06
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor; 49 1e-04
CP000113_6294(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 46 0.002
(Q94494) RecName: Full=Protein psiH; Flags: Precursor; &U67940_... 45 0.002
(Q2VWQ2) RecName: Full=Protein kinase C-binding protein NELL1; A... 44 0.006
(Q55FQ4) RecName: Full=Protein psiB; Flags: Precursor; 44 0.008
BC069674_1(BC069674|pid:none) Homo sapiens NEL-like 1 (chicken),... 42 0.017
(P98157) RecName: Full=Low-density lipoprotein receptor-related ... 42 0.017
U57523_1(U57523|pid:none) Human nel homolog mRNA, partial cds. 42 0.017
(Q92832) RecName: Full=Protein kinase C-binding protein NELL1; A... 42 0.017
AC116956_34(AC116956|pid:none) Dictyostelium discoideum chromoso... 41 0.038
BC047187_1(BC047187|pid:none) Danio rerio very low density lipop... 41 0.038
AC116963_42(AC116963|pid:none) Dictyostelium discoideum chromoso... 41 0.050
AE014298_2386(AE014298|pid:none) Drosophila melanogaster chromos... 41 0.050
BT046152_1(BT046152|pid:none) Drosophila melanogaster IP21864 fu... 41 0.050
AC115604_1(AC115604|pid:none) Dictyostelium discoideum chromosom... 40 0.065
BC121467_1(BC121467|pid:none) Xenopus tropicalis NEL-like 1, mRN... 40 0.065
(A2VCU8) RecName: Full=Protein kinase C-binding protein NELL2; A... 40 0.065
(Q7ZXL5) RecName: Full=Protein kinase C-binding protein NELL2; A... 40 0.085
AY299330_1(AY299330|pid:none) Herdmania curvata ci-meta1-like pr... 40 0.085
AY265358_1(AY265358|pid:none) Homo sapiens glycoprotein receptor... 40 0.11
T22793(T22793;T24489)hypothetical protein F56H11.1 - Caenorhabdi... 40 0.11
AF288451_1(AF288451|pid:none) Xenopus laevis LTBP-1S protein mRN... 40 0.11
AM050637_1(AM050637|pid:none) Blattella germanica mRNA for vitel... 40 0.11
AC007556_2(AC007556|pid:none) Homo sapiens BAC clone RP11-18C9 f... 40 0.11
(P98164) RecName: Full=Low-density lipoprotein receptor-related ... 40 0.11
AY265357_1(AY265357|pid:none) Homo sapiens glycoprotein receptor... 40 0.11
(A2ARV4) RecName: Full=Low-density lipoprotein receptor-related ... 35 0.12
AK049346_1(AK049346|pid:none) Mus musculus ES cells cDNA, RIKEN ... 35 0.13
(Q90827) RecName: Full=Protein NEL; AltName: Full=93 kDa protein... 39 0.19
AY540953_1(AY540953|pid:none) Strongylocentrotus purpuratus prot... 39 0.25
AM746676_3301(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 39 0.25
CR760336_1(CR760336|pid:none) Xenopus tropicalis finished cDNA, ... 38 0.32
(Q95209) RecName: Full=Sortilin-related receptor; AltName: Full=... 38 0.42
FJ594762_1(FJ594762|pid:none) Ictalurus punctatus a disintegrin ... 38 0.42
A48825(A48825)Notch homolog Motch protein - mouse (fragment) 36 0.45
AX647501_1(AX647501|pid:none) Sequence 1693 from Patent EP1270724. 37 0.55
AY627686_1(AY627686|pid:none) Didelphis virginiana megalin mRNA,... 37 0.55
AF529180_1(AF529180|pid:none) Drosophila melanogaster extracellu... 37 0.55
AE014297_4403(AE014297|pid:none) Drosophila melanogaster chromos... 37 0.55
(Q868Z9) RecName: Full=Papilin; Flags: Precursor; 37 0.55
BX510920_1(BX510920|pid:none) Zebrafish DNA sequence from clone ... 37 0.55
AK295090_1(AK295090|pid:none) Homo sapiens cDNA FLJ50960 complet... 37 0.72
AM746676_6052(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 37 0.72
AC115680_32(AC115680|pid:none) Dictyostelium discoideum chromoso... 37 0.72
AB066348_1(AB066348|pid:none) Crassostrea gigas IBCGH mRNA for i... 37 0.72
AK302589_1(AK302589|pid:none) Homo sapiens cDNA FLJ51150 complet... 37 0.72
(Q54FD8) RecName: Full=Protein psiD; Flags: Precursor; 37 0.72
(Q07954) RecName: Full=Prolow-density lipoprotein receptor-relat... 37 0.94
(O88307) RecName: Full=Sortilin-related receptor; AltName: Full=... 37 0.94
AB015790_1(AB015790|pid:none) Mus musculus mRNA for LR11, comple... 37 0.94
Y12004_1(Y12004|pid:none) M.musculus mRNA for receptor LR11/gp25... 37 0.94
(P10969) RecName: Full=Agglutinin isolectin 3; AltName: Full=WGA... 37 0.94
AF440359_1(AF440359|pid:none) Monosiga brevicollis receptor tyro... 37 0.94
BT072617_1(BT072617|pid:none) Salmo salar clone ssal-rgf-532-233... 37 0.94
(P35953) RecName: Full=Very low-density lipoprotein receptor; ... 36 1.2
(P15312) RecName: Full=Root-specific lectin; Flags: Precursor; ... 36 1.2
L22431_1(L22431|pid:none) Human very low density lipoprotein rec... 36 1.2
AF016537_1(AF016537|pid:none) Bos taurus very low density lipopr... 36 1.2
BT059468_1(BT059468|pid:none) Salmo salar clone ssal-rgf-530-199... 36 1.2
AY262832_1(AY262832|pid:none) Solenopsis invicta vitellogenin re... 36 1.2
AB304798_1(AB304798|pid:none) Marsupenaeus japonicus mRNA for pu... 36 1.2
AL450467_2(AL450467|pid:none) Human DNA sequence from clone RP11... 36 1.2
(P98155) RecName: Full=Very low-density lipoprotein receptor; ... 36 1.2
BT045649_1(BT045649|pid:none) Salmo salar clone ssal-rgf-527-290... 36 1.2
AB208822_1(AB208822|pid:none) Homo sapiens mRNA for Very low-den... 36 1.2
AF063866_10(AF063866|pid:none) Melanoplus sanguinipes entomopoxv... 36 1.6
(Q7TN75) RecName: Full=Retrotransposon-derived protein PEG10; Al... 36 1.6
I48952(I48952;S48217) VLDL receptor precursor, long splice form ... 36 1.6
AK137635_1(AK137635|pid:none) Mus musculus adult female vagina c... 36 1.6
AB209498_1(AB209498|pid:none) Homo sapiens mRNA for low density ... 36 1.6
Z75190_1(Z75190|pid:none) H.sapiens mRNA for apolipoprotein E re... 36 1.6
(Q8MJ04) RecName: Full=Oxygen-regulated protein 1; AltName: Full... 36 1.6
U73710_1(U73710|pid:none) Entamoeba dispar Gal/GalNAc-inhibitabl... 36 1.6
AK147303_1(AK147303|pid:none) Mus musculus adult male brain UNDE... 36 1.6
CP000113_6723(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 30 2.1
AF369477_1(AF369477|pid:none) Mus musculus strain 129P3/J lipopr... 35 2.1
AF514281_1(AF514281|pid:none) Oreochromis aureus vitellogenin re... 35 2.1
DQ643392_5(DQ643392|pid:none) Aedes taeniorhynchus iridescent vi... 35 2.1
AF086807_1(AF086807|pid:none) Bos taurus fertilin alpha (ADAM 1)... 35 2.1
AY173045_1(AY173045|pid:none) Morone americana vitellogenin rece... 35 2.1
(Q91ZX7) RecName: Full=Prolow-density lipoprotein receptor-relat... 35 2.1
NRL(2WGCA) agglutinin (isolectin 2) (with N-acetyneuraminyllacto... 35 2.1
S25111(S25111;S32554) alpha-2-macroglobulin receptor precursor -... 35 2.1
AC116967_8(AC116967|pid:none) Dictyostelium discoideum chromosom... 35 2.1
BC013622_1(BC013622|pid:none) Mus musculus very low density lipo... 35 2.1
L33417_1(L33417|pid:none) Mus musculus very low density lipoprot... 35 2.1
(P98156) RecName: Full=Very low-density lipoprotein receptor; ... 35 2.1
BC075241_1(BC075241|pid:none) Xenopus laevis hypothetical protei... 35 2.7
AF205357_1(AF205357|pid:none) Drosophila melanogaster extracellu... 35 2.7
AK131904_1(AK131904|pid:none) Mus musculus adult male tongue cDN... 35 2.7
AE014134_1265(AE014134|pid:none) Drosophila melanogaster chromos... 35 2.7
AF529179_1(AF529179|pid:none) Drosophila melanogaster extracellu... 35 2.7
CP000769_3327(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 35 2.7
U20217_1(U20217|pid:none) Mus musculus fibrillin-2 mRNA, partial... 35 2.7
BC071037_1(BC071037|pid:none) Xenopus laevis hypothetical protei... 35 2.7
AL805948_1(AL805948|pid:none) Mouse DNA sequence from clone RP23... 35 2.7
AK294289_1(AK294289|pid:none) Homo sapiens cDNA FLJ52457 complet... 35 2.7
(Q9JI18) RecName: Full=Low-density lipoprotein receptor-related ... 35 2.7
AF239608_1(AF239608|pid:none) Drosophila melanogaster SP1070 mRN... 35 2.7
Z11719_1(Z11719|pid:none) C.cobaya PH-30 alpha mRNA for sperm pr... 35 3.6
AF501275_1(AF501275|pid:none) Entamoeba histolytica clone C3 Gal... 35 3.6
CP000769_3723(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 35 3.6
DQ900934_1(DQ900934|pid:none) Ciona intestinalis gamma-carboxygl... 35 3.6
AF036687_2(AF036687|pid:none) Caenorhabditis elegans cosmid C08G... 35 3.6
AY218841_2(AY218841|pid:none) Danio rerio clone BUSM1-81J4 brahm... 35 3.6
T32497(T32497)hypothetical protein C08G9.2 - Caenorhabditis eleg... 35 3.6
BC141789_1(BC141789|pid:none) Danio rerio zgc:162651, mRNA (cDNA... 34 4.7
U03272_1(U03272|pid:none) Human fibrillin-2 mRNA, complete cds. 34 4.7
AB209735_1(AB209735|pid:none) Homo sapiens mRNA for fibrillin 2 ... 34 4.7
CR450687_2(CR450687|pid:none) Zebrafish DNA sequence from clone ... 34 4.7
A54105(A54105;S17063;S31101)fibrillin-2 precursor - human 34 4.7
AB199644_1(AB199644|pid:none) Macaca fascicularis Corin mRNA for... 34 4.7
BT033001_1(BT033001|pid:none) Drosophila melanogaster IP21817 fu... 34 4.7
AK021187_1(AK021187|pid:none) Mus musculus ES cells cDNA, RIKEN ... 34 4.7
AK029742_1(AK029742|pid:none) Mus musculus adult male testis cDN... 34 4.7
(Q9Y561) RecName: Full=Low-density lipoprotein receptor-related ... 34 6.1
AP008215_740(AP008215|pid:none) Oryza sativa (japonica cultivar-... 34 6.1
AP005419_8(AP005419|pid:none) Oryza sativa Japonica Group genomi... 34 6.1
AY540956_1(AY540956|pid:none) Lytechinus variegatus soft fertili... 34 6.1
AX133833_1(AX133833|pid:none) Sequence 19 from Patent WO0119856. 34 6.1
AK088189_1(AK088189|pid:none) Mus musculus 2 days neonate thymus... 34 6.1
AF179414_1(AF179414|pid:none) Dendroides canadensis antifreeze p... 34 6.1
AL807828_3(AL807828|pid:none) Mouse DNA sequence from clone RP23... 34 6.1
(Q9Z1P5) RecName: Full=CD320 antigen; AltName: Full=Transcobalam... 34 6.1
AX084235_1(AX084235|pid:none) Sequence 29 from Patent WO0110902. 34 6.1
AB009075_1(AB009075|pid:none) Lampetra japonica mRNA for mannose... 34 6.1
CP000113_1974(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 34 6.1
D85463_1(D85463|pid:none) Mus musculus mRNA for apolipoprotein E... 34 6.1
A30363(A30363)glycoprotein GP330, renal - rat (fragments) 34 6.1
(Q924X6) RecName: Full=Low-density lipoprotein receptor-related ... 34 6.1
AM746676_4329(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 34 6.1
BX927144_3(BX927144|pid:none) Zebrafish DNA sequence from clone ... 34 6.1
(Q9BE74) RecName: Full=Low-density lipoprotein receptor-related ... 34 6.1
FJ039902_1(FJ039902|pid:none) Triticum aestivum DEP1 (DEP1) mRNA... 34 6.1
FJ501956_1(FJ501956|pid:none) Oryza sativa Indica Group keratin ... 34 6.1
(P98158) RecName: Full=Low-density lipoprotein receptor-related ... 34 6.1
AK220196_1(AK220196|pid:none) Mus musculus mRNA for mKIAA4226 pr... 34 6.1
AK299277_1(AK299277|pid:none) Homo sapiens cDNA FLJ53170 complet... 34 6.1
U57753_1(U57753|pid:none) Strongylocentrotus purpuratus SFE1 mRN... 34 6.1
(Q968Z6) RecName: Full=Protein psiA; AltName: Full=Prespore-cell... 34 6.1
(Q61555) RecName: Full=Fibrillin-2; Flags: Precursor; &A57278(A... 34 6.1
AB056772_1(AB056772|pid:none) Macaca fascicularis brain cDNA clo... 34 6.1
AE014134_2528(AE014134|pid:none) Drosophila melanogaster chromos... 34 6.1
(Q5R662) RecName: Full=Low-density lipoprotein receptor-related ... 34 6.1
L14815_1(L14815|pid:none) Entamoeba histolytica HM-1:IMSS galact... 34 6.1
AK299374_1(AK299374|pid:none) Homo sapiens cDNA FLJ55619 complet... 34 6.1
CR556709_2(CR556709|pid:none) Zebrafish DNA sequence from clone ... 27 7.3
BC057410_1(BC057410|pid:none) Danio rerio a disintegrin and meta... 27 7.3
AB299015_1(AB299015|pid:none) Haemaphysalis longicornis mRNA for... 33 8.0
AY077631_1(AY077631|pid:none) Gallus gallus disintegrin metallop... 33 8.0
AM403063_1(AM403063|pid:none) Blattella germanica mRNA for lipop... 33 8.0
AJ851616_1(AJ851616|pid:none) Gallus gallus mRNA for hypothetica... 33 8.0
AB201472_1(AB201472|pid:none) Bombyx mori LpR2 mRNA for lipophor... 33 8.0
AB201474_1(AB201474|pid:none) Bombyx mori LpR4 mRNA for lipophor... 33 8.0
AM403064_1(AM403064|pid:none) Blattella germanica mRNA for lipop... 33 8.0
AM910990_169(AM910990|pid:none) Plasmodium knowlesi strain H chr... 33 8.0
BC123530_1(BC123530|pid:none) Bos taurus EGF, latrophilin and se... 33 8.0
AL592545_3(AL592545|pid:none) Mouse DNA sequence from clone RP23... 33 8.0
>S44208(S44208) extracellular matrix protein B - Dictyostelium
minutum (fragment) &X78948_1(X78948|pid:none)
Length = 313
Score = 72.0 bits (175), Expect(2) = 5e-16
Identities = 39/105 (37%), Positives = 53/105 (50%)
Frame = -1
Query: 555 CLYETIDLDDEVDCTVDTCSDRYGVKNTPNNSLCPPENLCDMFLCDTQSGCVAIPKVNCP 376
C + ++ DD+ CTVD+CS+ G +TP + C N C + CD GCV P C
Sbjct: 126 CTHTPMNCDDKNACTVDSCSNSTGCSHTPIS--CDDYNSCTVDSCDCNGGCVHTPTA-CD 182
Query: 375 APNPCQIPLGCNRETGICEYDEIDCHDDNECTNDYCDPILGECVH 241
N C + C+ +TG C + + C D N CT D CD G C H
Sbjct: 183 DKNACTVD-SCSNKTG-CSHTPVSCDDHNSCTFDTCDCNKG-CTH 224
Score = 35.8 bits (81), Expect(2) = 5e-16
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 139 NCNXWGNPCTDDYCDFKNGCVSQKNDWNCDSLSACSEGICTSA 11
NC+ GN CT D CD GC Q N CD +AC+ C+++
Sbjct: 252 NCDD-GNSCTADSCDCTRGC--QHNPIPCDDGNACTIDTCSNS 291
Score = 73.2 bits (178), Expect(2) = 7e-15
Identities = 43/135 (31%), Positives = 62/135 (45%)
Frame = -1
Query: 645 IKLCCSEYCGETYCVENRNCYSFIGCRNSTCLYETIDLDDEVDCTVDTCSDRYGVKNTPN 466
I +C C + +C +GC + I DD CT+D+C G ++TP
Sbjct: 29 IGICIKLNCDDGNACTQDSCNGLLGC-----CHTPISCDDGNACTLDSCDCIKGCQHTPM 83
Query: 465 NSLCPPENLCDMFLCDTQSGCVAIPKVNCPAPNPCQIPLGCNRETGICEYDEIDCHDDNE 286
N C N C + CD + GC+ P +NC NPC + C+ + G C + ++C D N
Sbjct: 84 N--CDDNNACTLDSCDCKGGCIHTP-MNCDDHNPCTLD-SCDGKGG-CTHTPMNCDDKNA 138
Query: 285 CTNDYCDPILGECVH 241
CT D C G C H
Sbjct: 139 CTVDSCSNSTG-CSH 152
Score = 30.8 bits (68), Expect(2) = 7e-15
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 121 NPCTDDYCDFKNGCVSQKNDWNCDSLSACSEGICTS 14
N CT D CD GCV CD +AC+ C++
Sbjct: 161 NSCTVDSCDCNGGCVHTPT--ACDDKNACTVDSCSN 194
Score = 70.5 bits (171), Expect(2) = 3e-13
Identities = 39/108 (36%), Positives = 52/108 (48%)
Frame = -1
Query: 564 NSTCLYETIDLDDEVDCTVDTCSDRYGVKNTPNNSLCPPENLCDMFLCDTQSGCVAIPKV 385
N C++ DD+ CTVD+CS++ G +TP + C N C CD GC P +
Sbjct: 171 NGGCVHTPTACDDKNACTVDSCSNKTGCSHTPVS--CDDHNSCTFDTCDCNKGCTHTP-I 227
Query: 384 NCPAPNPCQIPLGCNRETGICEYDEIDCHDDNECTNDYCDPILGECVH 241
C N C C+ + G C + I+C D N CT D CD G C H
Sbjct: 228 TCDDNNACTFD-SCDGKGG-CSHTPINCDDGNSCTADSCDCTRG-CQH 272
Score = 27.7 bits (60), Expect(2) = 3e-13
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3
Query: 124 GNPCTDDYCDFKNGCVSQKNDWNCDSLSACSEGIC 20
GN CT D C GC + C+ + C++ IC
Sbjct: 280 GNACTIDTCSNSTGCSHTR--MVCEDDNPCTDNIC 312
Score = 69.3 bits (168), Expect(2) = 2e-11
Identities = 44/133 (33%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
Frame = -1
Query: 633 CSEYCGET-YCVENRNCYSFIGCRNST-CLYETIDLDDEVDCTVDTCSDRYGVKNTPNNS 460
C+ C T +++N + C N T C + + DD CT DTC G +TP
Sbjct: 170 CNGGCVHTPTACDDKNACTVDSCSNKTGCSHTPVSCDDHNSCTFDTCDCNKGCTHTP--I 227
Query: 459 LCPPENLCDMFLCDTQSGCVAIPKVNCPAPNPCQIPLGCNRETGICEYDEIDCHDDNECT 280
C N C CD + GC P +NC N C C+ G C+++ I C D N CT
Sbjct: 228 TCDDNNACTFDSCDGKGGCSHTP-INCDDGNSCTAD-SCDCTRG-CQHNPIPCDDGNACT 284
Query: 279 NDYCDPILGECVH 241
D C G C H
Sbjct: 285 IDTCSNSTG-CSH 296
Score = 23.1 bits (48), Expect(2) = 2e-11
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 121 NPCTDDYCD 95
NPCTD+ CD
Sbjct: 305 NPCTDNICD 313
Score = 70.1 bits (170), Expect = 8e-11
Identities = 43/122 (35%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Frame = -1
Query: 600 ENRNCYSFIGCRNST-CLYETIDLDDEVDCTVDTCSDRYGVKNTPNNSLCPPENLCDMFL 424
+++N + C NST C + I DD CTVD+C G +TP + C +N C +
Sbjct: 134 DDKNACTVDSCSNSTGCSHTPISCDDYNSCTVDSCDCNGGCVHTP--TACDDKNACTVDS 191
Query: 423 CDTQSGCVAIPKVNCPAPNPCQI-PLGCNRETGICEYDEIDCHDDNECTNDYCDPILGEC 247
C ++GC P V+C N C CN+ C + I C D+N CT D CD G C
Sbjct: 192 CSNKTGCSHTP-VSCDDHNSCTFDTCDCNKG---CTHTPITCDDNNACTFDSCDG-KGGC 246
Query: 246 VH 241
H
Sbjct: 247 SH 248
Score = 68.9 bits (167), Expect = 2e-10
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = -1
Query: 606 CVENRNCYSFIGCR-NSTCLYETIDLDDEVDCTVDTCSDRYGVKNTPNNSLCPPENLCDM 430
C ++ +C +F C N C + I DD CT D+C + G +TP N C N C
Sbjct: 205 CDDHNSC-TFDTCDCNKGCTHTPITCDDNNACTFDSCDGKGGCSHTPIN--CDDGNSCTA 261
Query: 429 FLCDTQSGCVAIPKVNCPAPNPCQIPLGCNRETGICEYDEIDCHDDNECTNDYCD 265
CD GC P + C N C I C+ TG C + + C DDN CT++ CD
Sbjct: 262 DSCDCTRGCQHNP-IPCDDGNACTIDT-CSNSTG-CSHTRMVCEDDNPCTDNICD 313
Score = 33.5 bits (75), Expect(2) = 0.002
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -3
Query: 124 GNPCTDDYCDFKNGCVSQKNDWNCDSLSACSEGIC 20
GN CT D CD GC Q NCD +AC+ C
Sbjct: 64 GNACTLDSCDCIKGC--QHTPMNCDDNNACTLDSC 96
Score = 31.2 bits (69), Expect(2) = 0.002
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -1
Query: 336 ETGICEYDEIDCHDDNECTNDYCDPILGEC 247
+ GIC +++C D N CT D C+ +LG C
Sbjct: 28 DIGICI--KLNCDDGNACTQDSCNGLLGCC 55
Score = 37.4 bits (85), Expect = 0.55
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 139 NCNXWGNPCTDDYCDFKNGCVSQKNDWNCDSLSACSEGICTSA 11
NC+ NPCT D CD K GC NCD +AC+ C+++
Sbjct: 108 NCDDH-NPCTLDSCDGKGGCT--HTPMNCDDKNACTVDSCSNS 147
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,151,839,385
Number of extensions: 24193595
Number of successful extensions: 67870
Number of sequences better than 10.0: 172
Number of HSP's gapped: 67130
Number of HSP's successfully gapped: 328
Length of query: 263
Length of database: 1,040,966,779
Length adjustment: 126
Effective length of query: 137
Effective length of database: 637,226,869
Effective search space: 87300081053
Effective search space used: 87300081053
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
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