Dictyostelium discoideum cDNA Contig-U10067-1

Assembled

Chromosomal Location of Contig-U10067-1

Sequence Contig-U10067-1

GCGTGGTCGC GGCCGAGGTA CATATACCTT CGGAACATGC ACTTAGTGAA
TCACAATTCC AATCGTTTTT TTGTGAAACA CATCCGTTTT TAAAATCGCA
ATAATCATCT GTGCATGGAT TACCCCATNC ATTGCAATTA TCTTCTTACG
TATTTACAGC CAAACTCTCC ACATACTCCA CTTAGGACAC AAGTAGAGAA
GTTACTTGCT TTATTTGAAC ATAATGGTAT CATTGGAAAA GTGGACGCAT
TCTCCAAGTA TTGGGTCACA ATAGTCGTTG GTACATTCAT TATCATCATG
GCAATCAATT TCATCGTATT CACAAATACC AGTTTCTCTA TTACAACCTA
ATGGAATTTG ACATGGGTTT GGTGCTGGAC AATTTACTTT TGGTATAGCA
ACACAACCAC TTTGAGTATC ACATAGAAAC ATATCACATA AATTTTCTGG
TGGGCATAAT GAATTATTTG GAGTATTTTT AACACCATAT CTATCACTAC
ATGTGTCTAC TGTACAATCA ACTTCATCAT CTAAATCTAT TGTTTCATAT
AAACATGTTG AATTTCTGCA ACCTATAAAT GAATAACAAT TTCTATTTTC
AACGCAATAA GTTTCTCCAC AATACTCTGA ACAACAAAGT TTTATAGCAA
ATAATAAAAA TACTACAATA TATAATAATT TCATATTATT TAAATTTAGA
TTTAATTATT ATAATAAATT AAATAGAATG TAGTTTGTTT ATTTAAAAAA
AGAATTTAAA AAAAAAAAAA AAAAAAAAAA AAAGCTTGT

Translated Amino Acid Sequence Contig-U10067-1

awsrpryiylrnmhlvnhnsnrffvkhirf*NRNNHLCMDYPXHCNYLLTYLQPNSPHTP
LRTQVEKLLALFEHNGIIGKVDAFSKYWVTIVVGTFIIIMAINFIVFTNTSFSITT*wnl
twvwcwtiyfwysntttlsit*khit*ifwwa**iiwsifntisittcvyctinfii*iy
cfi*tc*isatyk*itisifnaisfstil*ttkfysk**kyyni**fhii*i*i*ll**i
k*nvvclfkkri*kkkkkkkkac

Homology Contig-U10067-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U10067-1 (Contig-U10067-1Q) /CSM_Contig/Conti...  1235  0.0
Contig-U13296-1 (Contig-U13296-1Q) /CSM_Contig/Conti...    36  0.055
Contig-U12151-1 (Contig-U12151-1Q) /CSM_Contig/Conti...    36  0.055
Contig-U09471-1 (Contig-U09471-1Q) /CSM_Contig/Conti...    36  0.055
Contig-U12809-1 (Contig-U12809-1Q) /CSM_Contig/Conti...    34  0.22
Contig-U12188-1 (Contig-U12188-1Q) /CSM_Contig/Conti...    34  0.22
Contig-U10972-1 (Contig-U10972-1Q) /CSM_Contig/Conti...    34  0.22
Contig-U10306-1 (Contig-U10306-1Q) /CSM_Contig/Conti...    34  0.22
Contig-U09464-1 (Contig-U09464-1Q) /CSM_Contig/Conti...    34  0.22
Contig-U09421-1 (Contig-U09421-1Q) /CSM_Contig/Conti...    34  0.22

Homology Contig-U10067-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ360941) Dictyostelium discoideum cDNA clone:ddc8l13, 5' e...   833   0.0    2
(AU272182) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   708   0.0    1
(AU272183) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   603   0.0    2
(AU272308) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   448   e-121  1
(AU272307) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   446   e-121  1
(AU271863) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   182   e-118  4
(AU272195) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   149   e-114  5
(AU275068) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   149   e-113  5
(AU275061) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   149   e-113  5
(AU271364) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   149   e-113  5

Homology Contig-U10067-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


S44208(S44208) extracellular matrix protein B - Dictyostelium mi...    73   5e-16
(P11976) RecName: Full=Prestalk protein; AltName: Full=Extracell...    77   1e-15
A26838(A26838)prestalk protein precursor - slime mold (Dictyoste...    76   1e-15
AC117072_61(AC117072|pid:none) Dictyostelium discoideum chromoso...    70   5e-14
AC116984_103(AC116984|pid:none) Dictyostelium discoideum chromos...    79   2e-13
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor;                 60   3e-12
A27020(A27020)DIF-induced prestalk pDd63 protein precursor - sli...    69   8e-11
(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor;                 65   2e-09
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor;                 62   3e-08
(Q54C31) RecName: Full=Protein psiR; Flags: Precursor;                 54   4e-06