Homology Contig-U10032-1 vs DNA
Query= Contig-U10032-1 (Contig-U10032-1Q) /CSM_Contig/Contig-U10032-1Q.Seq.d
(183 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ415715) Dictyostelium discoideum cDNA clone:ddv23a17, 5' ... 90 3e-14 1
(CW689960) OG_BBa0051B01.f OG_BBa Oryza glaberrima genomic c... 52 0.007 1
(AC079901) Homo sapiens 3 BAC RP11-744G4 (Roswell Park Cance... 46 0.45 1
(AC117407) Homo sapiens chromosome 3 clone RP11-30F1, *** SE... 46 0.45 1
(AC025780) Homo sapiens chromosome 3 clone RP11-431F7, WORKI... 46 0.45 1
(AC013645) Homo sapiens clone RP11-17H6, WORKING DRAFT SEQUE... 46 0.45 1
(AC180872) Strongylocentrotus purpuratus clone R3-3067L18, W... 42 0.81 2
(AC188179) Gallus gallus BAC clone CH261-191K24 from chromos... 44 1.8 1
(AC230099) Bos taurus clone CH240-521P6, WORKING DRAFT SEQUE... 44 1.8 1
(CL766234) OR_BBa0137L05.r OR_BBa Oryza nivara genomic clone... 44 1.8 1
(CL630814) OR_BBa0040J23.f OR_BBa Oryza nivara genomic clone... 44 1.8 1
(BZ904388) CH240_25L22.TJ CHORI-240 Bos taurus genomic clone... 44 1.8 1
(AP009512) Uncultured Termite group 1 bacterium phylotype Rs... 44 1.8 1
(AC184161) Medicago truncatula chromosome 7 BAC clone mte1-2... 42 7.0 1
(AL512430) Human DNA sequence from clone RP11-346C16 on chro... 42 7.0 1
(AC093795) Homo sapiens BAC clone RP11-299P3 from 4, complet... 42 7.0 1
(AC092931) Homo sapiens 3 BAC RP11-131O20 (Roswell Park Canc... 42 7.0 1
(AC160783) Bos taurus clone CH240-95G7, WORKING DRAFT SEQUEN... 42 7.0 1
(AC073180) Homo sapiens chromosome 2 clone RP13-486M11, WORK... 42 7.0 1
(AC237243) Spermophilus tridecemlineatus clone VMRC20-556G22... 42 7.0 1
(AC234055) Eulemur macaco macaco clone CH273-47H24, WORKING ... 42 7.0 1
(AC223349) Bos taurus clone CH240-421E4, WORKING DRAFT SEQUE... 42 7.0 1
(AC171373) Muntiacus reevesi clone CH245-73O4, WORKING DRAFT... 42 7.0 1
(AC169529) Bos taurus clone CH240-226P12, WORKING DRAFT SEQU... 42 7.0 1
(AC169449) Muntiacus muntjak vaginalis clone CH244-217N18, W... 42 7.0 1
(AC167735) Bos taurus clone CH240-201I12, WORKING DRAFT SEQU... 42 7.0 1
(AC164966) Bos taurus clone CH240-159K13, WORKING DRAFT SEQU... 42 7.0 1
(FI778144) Sherm-Tim1_01_A02_F5 Sherm-Tim1 Striga hermonthic... 42 7.0 1
(FI777432) Sherm-Tim1_01_K02_F5 Sherm-Tim1 Striga hermonthic... 42 7.0 1
(AM603057) Entamoeba invadens IP1 GSS, clone inv021e10.q1k. 42 7.0 1
(DU081706) 276877 Tomato HindIII BAC Library Solanum lycoper... 42 7.0 1
(CV320707) CM3-CT0511-160900-355-e09_1 CT0511 Homo sapiens c... 42 7.0 1
(AJ816455) Bos sp. EST, clone C0005210b13. 42 7.0 1
(AC229634) Monodelphis domestica clone VMRC18-366J16, WORKIN... 36 7.5 2
(AC219910) Bos taurus clone CH240-319A18, WORKING DRAFT SEQU... 38 9.0 2
>(BJ415715) Dictyostelium discoideum cDNA clone:ddv23a17, 5' end,
single read.
Length = 183
Score = 89.7 bits (45), Expect = 3e-14
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 1 agacaaactttctctatttttaaaacttattgtaatttacattca 45
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Sbjct: 1 agacaaactttctctatttttaaaacttattgtaatttacattca 45
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 85,598,923
Number of extensions: 6319302
Number of successful extensions: 1791236
Number of sequences better than 10.0: 35
Length of query: 183
Length of database: 106,710,029,556
Length adjustment: 23
Effective length of query: 160
Effective length of database: 104,212,228,590
Effective search space: 16673956574400
Effective search space used: 16673956574400
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
Dictyostelium discoideum cDNA Project Home