Dictyostelium discoideum cDNA Contig-U09928-1

Assembled

Chromosomal Location of Contig-U09928-1

Sequence Contig-U09928-1

CAGAAACTGA CCTTAAGAGT ACTCCTTCGA AACAATTTTG AGTGGTTGTT
AGTAAGGCTT TTTCTGGCAA AAAGAGAAAT TAGAGAGAGA TCTTTAAACA
ACTGGGTTTA GAAATTCTAT GATCATTTCG GTTGTGCCAA GATCTCACAT
AAAAAATTTT TTATTTCCAA ATTACAATGA AAAGATTTAT TTCAACAACA
AGTTTACGTG TTTTATCAAA TTTAAATAAA AACAATAACA ATAACAACAA
GTTTAACAAA TCAATTGTTG GAGTATTCAA TAGAGAATTC TCAAGTTCAA
ATGAAGGATT AAATAAAGTT AATTTTGGTG AAAATAATAA CTCATCCACC
ACTGAACCAA CTAAAGTATT ATTTAACGAT TCACAATTTT ATCAAGAGGA
TAAATATCAA GGTATTTCAA AAGAACCATT TAGTAAAGAG ATTGTTGATA
CTTTATTAGC AGATTTAAAT CCAGACGATA TTGAAATCAA ACCAGATGGT
TTAATTTATT TACCAGAGAT CAAATATAGA CGTATTTTAA ATCAAGCATT
CGGACCAGGA GGTTGGGCAT TAAAACCATT CGGACCACCA GTTGTCGAGG
GTAAAACATT GATTAGACCT TATGCACTCT ATTGTTTAGG TAGATATGTA
GCCCGAATCC ATTGGTGAGC AACAATACGT TCCCAAATTC ATTCATTTCA
TTTGCCACCG CCACTGAATC TGCTAAATCC AATGCATTGG TTCGTTGTTG
TAAAGATTTA GGTATTGGCT CAAGTCTTTG GGATCCAATT TTCATTCGTC
AATGGAAATC TGAATATGCC ACAGAGAGAT GGTGTGAAAA TTCAAAAACA
AAAGAAAGAC GTTTGTTTTG GTTCCTTTCA AATCGTTCAG AAAATCAACT
TCCATATCCA TGGAAAGAAT CTGATTTTAA TCAAGTACCA TCAAATTCAT
CATATTCATC ATCATCATCA TCAATAAATA ACAATAGTAA TAGTAGTAAT
AATAATAATA ATAATAGTGA TTCATCATCT TCAATAAATC AACCACAACA
AGAAACAATT TCATATCATC AAGATGATTC ATCTTCACCA TCATCAAAAA
TTACAGAACA ACAAGATGAT TCAGAAGATA TTGATATCGA TGATGTAGTA
CCACCACAAT TAAAGAAATA TGCAGGTAAA ACATGGAGAC AACTTGTTGC
TGATCCAAAA GGTCTTAGTT ATTTACAATG GGCTTCTTCA TCATTCGATA
ATGCCCCCAA AATTAAAAGT CAAGCAACTG CAATTTTAGA ATTTATCAAT
AAAAGTCAAT AAATTATTAA AATTTTAAAA AAAATAAAAT TACTTTTTTA
TTTTTAT

Translated Amino Acid Sequence Contig-U09928-1

rn*p*eysfetilsgc**gffwqkeklerdl*ttgfrnsmiisvvprshiknflfpnyne
kiyfnnkftcfikfk*kq*q*qqv*qincwsiq*rilkfk*rik*s*fw*k**lihh*tn
*sii*rftilsrg*isryfkrti**rdc*yfisrfksrry*nqtrwfnlftrdqi*tyfk
ssirtrrlgiktirttscrg*nid*tlctllfr*ICSPNPLVSNNTFPNSFISFATATES
AKSNALVRCCKDLGIGSSLWDPIFIRQWKSEYATERWCENSKTKERRLFWFLSNRSENQL
PYPWKESDFNQVPSNSSYSSSSSSINNNSNSSNNNNNNSDSSSSINQPQQETISYHQDDS
SSPSSKITEQQDDSEDIDIDDVVPPQLKKYAGKTWRQLVADPKGLSYLQWASSSFDNAPK
IKSQATAILEFINKSQ*iikilkkikllfyfy

Homology Contig-U09928-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U09928-1 (Contig-U09928-1Q) /CSM_Contig/Conti...  1859  0.0
Contig-U01618-1 (Contig-U01618-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U09102-1 (Contig-U09102-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U14176-1 (Contig-U14176-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U13881-1 (Contig-U13881-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U12593-1 (Contig-U12593-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U12071-1 (Contig-U12071-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U11808-1 (Contig-U11808-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U05483-1 (Contig-U05483-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U14831-1 (Contig-U14831-1Q) /CSM_Contig/Conti...    38  0.024

Homology Contig-U09928-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ325020) Dictyostelium discoideum cDNA clone:dda9c11, 5' e...  1160   0.0    1
(BJ416704) Dictyostelium discoideum cDNA clone:ddv27d04, 5' ...   993   0.0    3
(BJ410128) Dictyostelium discoideum cDNA clone:ddv11g10, 5' ...   993   0.0    3
(BJ341398) Dictyostelium discoideum cDNA clone:dda6b17, 3' e...   567   0.0    3
(BJ435406) Dictyostelium discoideum cDNA clone:ddv27d04, 3' ...   553   0.0    4
(BJ428268) Dictyostelium discoideum cDNA clone:ddv11g10, 3' ...   553   0.0    3
(BJ324478) Dictyostelium discoideum cDNA clone:dda6b17, 5' e...  1051   0.0    1
(AU262895) Dictyostelium discoideum vegetative cDNA clone:VS...   553   0.0    2
(BJ342041) Dictyostelium discoideum cDNA clone:dda9c11, 3' e...   553   0.0    2
(BJ413318) Dictyostelium discoideum cDNA clone:ddv15g01, 5' ...   274   9e-69  1

Homology Contig-U09928-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC117081_54(AC117081|pid:none) Dictyostelium discoideum chromoso...   300   e-161
AM920437_1939(AM920437|pid:none) Penicillium chrysogenum Wiscons...   112   1e-41
U43558_1(U43558|pid:none) Kluyveromyces lactis mitochondrial gen...   106   2e-41
(Q00970) RecName: Full=Mitochondrial genome maintenance protein ...   106   3e-41
AP007171_598(AP007171|pid:none) Aspergillus oryzae RIB40 genomic...   108   7e-40
(Q6BN05) RecName: Full=Mitochondrial genome maintenance protein ...   108   1e-39
S72480(S72480)mgm101 protein - yeast (Kluyveromyces marxianus va...   103   2e-39
AM270372_32(AM270372|pid:none) Aspergillus niger contig An16c020...   105   3e-39
(Q5AI97) RecName: Full=Mitochondrial genome maintenance protein ...   103   2e-38
FM992688_244(FM992688|pid:none) Candida dubliniensis CD36 chromo...   104   5e-38