<Clone: Contig-U09766-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U09766-1

Dictyostelium discoideum cDNA Project Home

Assembled

Chromosomal Location of Contig-U09766-1

< more Chromosomal info >

Chromosome Number 4
Length 5430582
Start Poin 5,264,645
End Point 5,265,782
Strand PLUS

Sequence Contig-U09766-1

GATAAAAATA ATTTATTATT TTCAAAATTC AAAAAAAATA AAAGAAAAGA
GGTGTTTTCA TTCATTAAAA AGAAAATGAA TTTTTCAAAA TTATTATTTT
CAATAATAGT AGTTTTAACA GTTGTGGTAC TATTATTTAA TAATGAAAAT
ATTTTAGTTG AAGCACAAGT TGGTAATCTT TGTATTAAAT GTTTANAATT
TGGTGAAAGT TGTAATTCAA ATGGTGCTTG TAGTAAAGAT AGTGTTTGTN
CAAGCGATAC TGAAAGATTT CAAGAAAATC CTGTTTGTTC AGAACCAAAA
GAACTCGGTC AAGATTGTAA AAATGATGAA CAATGTCGTT TGGGAACTAA
ATGTAAAAAA GAATTAAATA ATGAATTTGG TTCTTGTTCT GATATTAAAT
TCGCACAAGT TGGAGAAAAA TGTTCACAAG ATTTTGATTG TTCAGGTAGA
CTTTTAAAAT GTAAAGAAGG AATTTGTGTA AAACCAACTG GTGATTTACC
ATGTGGTGTA GAGAATCCAT GTCCATTTGG TGAATACTGT CAATATTCAA
GCAAAACTTG TAATAAACAA TTAAAAGAAA ATGATAATTG T---------
---------- -NNNNNNNNN TATTACATAT CCAGGATTAT ATTTAAGAAT
GGAGAATCAT TGTTCACCAT TTCATCAATG TTCATGTTCA GATTATAAAT
GTCATCCAAC CAGAGAGTTT GGATCAAGTT TCGTAAAGAC ATATAAGGAT
TTCAATCAAT GTATTGAGAA ACATAAGTGT CAATTCACCT ATAATAGATT
TTCAAATAAT TCATGTATCA CCAAAAATTG TGGTCCACAA TTTTGTAAAT
TCAATAGAGC ACTCCAACCT GATAATCAAT TGAATTGTGG TAAAGTTGCC
ATTACCAATT ATTGTCAAAC CGTTAACCAT CTCTTCCCAC CAATTAAATC
AAAAATCTTT TTAAATCATT CAAAAGAAGA TTTATTCTTT TTTGCAACTT
CTATTCCTTT CTTAATTTTA TTCTTTTCAG TTTATGTTGA AATTAAATTA
GCAAGAAAAG AAAGATTAGA TTTAATTCAT AGTCATAGAG ATATTTCTTA
TGATTCTGAC GAGGATCATA ATAATTTTAA TAATCATAAT AATAATAATA
ATAATAATAA TAATAA

Translated Amino Acid Sequence Contig-U09766-1

<All Frames> 
DKNNLLFSKFKKNKRKEVFSFIKKKMNFSKLLFSIIVVLTVVVLLFNNENILVEAQVGNL
CIKCLXFGESCNSNGACSKDSVCXSDTERFQENPVCSEPKELGQDCKNDEQCRLGTKCKK
ELNNEFGSCSDIKFAQVGEKCSQDFDCSGRLLKCKEGICVKPTGDLPCGVENPCPFGEYC
QYSSKTCNKQLKENDNCXXX---

---XXXITYPGLYLRMENHCSPFHQCSCSDYKCHPTREFGSSFVKTYKDFNQCIEKHKCQ
FTYNRFSNNSCITKNCGPQFCKFNRALQPDNQLNCGKVAITNYCQTVNHLFPPIKSKIFL
NHSKEDLFFFATSIPFLILFFSVYVEIKLARKERLDLIHSHRDISYDSDEDHNNFNNHNN
NNNNNNN


Homology Contig-U09766-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U09766-1 (Contig-U09766-1Q) /CSM_Contig/Conti...   985  0.0
Contig-U12890-1 (Contig-U12890-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U14276-1 (Contig-U14276-1Q) /CSM_Contig/Conti...    38  0.021
Contig-U12286-1 (Contig-U12286-1Q) /CSM_Contig/Conti...    38  0.021
Contig-U11292-1 (Contig-U11292-1Q) /CSM_Contig/Conti...    38  0.021
Contig-U14278-1 (Contig-U14278-1Q) /CSM_Contig/Conti...    36  0.082
Contig-U14197-1 (Contig-U14197-1Q) /CSM_Contig/Conti...    36  0.082
Contig-U14065-1 (Contig-U14065-1Q) /CSM_Contig/Conti...    36  0.082
Contig-U12928-1 (Contig-U12928-1Q) /CSM_Contig/Conti...    36  0.082
Contig-U12811-1 (Contig-U12811-1Q) /CSM_Contig/Conti...    36  0.082


Homology Contig-U09766-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(BJ417662) Dictyostelium discoideum cDNA clone:ddv28i09, 5' ...   963   0.0    2
(BJ435786) Dictyostelium discoideum cDNA clone:ddv28i09, 3' ...   712   0.0    2
(AP009608) Mycoplasma fermentans PG18 DNA, nearly complete g...    40   0.020  18
(AU284729) Dictyostelium discoideum gamete cDNA clone:FC-BI2...    42   0.021  2
(AM471608) Vitis vinifera contig VV78X258796.7, whole genome...    42   0.034  3
(AU272054) Dictyostelium discoideum gamete cDNA clone:FC-IC1...    46   0.074  2
(AU272053) Dictyostelium discoideum gamete cDNA clone:FC-IC1...    46   0.074  2
(AM456592) Vitis vinifera contig VV78X085916.10, whole genom...    44   0.10   2
(AM660636) Entamoeba moshkovskii FIC GSS, clone mosh102a12.p1k.    30   0.14   4
(AF250284) Amsacta moorei entomopoxvirus, complete genome.         36   0.22   10


Homology Contig-U09766-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


AC116977_110(AC116977|pid:none) Dictyostelium discoideum chromos...    84   1e-14
AB079253_1(AB079253|pid:none) Dictyostelium discoideum Dd-gdcA m...    57   1e-06
AL110498_8(AL110498|pid:none) Caenorhabditis elegans YAC Y64G10A...    47   0.001
BC149245_1(BC149245|pid:none) Bos taurus similar to CG33196-PB, ...    47   0.001
AJ133651_1(AJ133651|pid:none) Trichoderma harzianum cmp1 gene.         46   0.003
AC115680_32(AC115680|pid:none) Dictyostelium discoideum chromoso...    46   0.003
U28735_9(U28735|pid:none) Caenorhabditis elegans cosmid F48E3, c...    45   0.005
U28735_10(U28735|pid:none) Caenorhabditis elegans cosmid F48E3, ...    45   0.005
AY265358_1(AY265358|pid:none) Homo sapiens glycoprotein receptor...    45   0.006
AC115680_25(AC115680|pid:none) Dictyostelium discoideum chromoso...    45   0.006


<Clone: Contig-U09766-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

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