Homology Contig-U09766-1 vs DNA
Query= Contig-U09766-1 (Contig-U09766-1Q) /CSM_Contig/Contig-U09766-1Q.Seq.d
(1166 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ417662) Dictyostelium discoideum cDNA clone:ddv28i09, 5' ... 963 0.0 2
(BJ435786) Dictyostelium discoideum cDNA clone:ddv28i09, 3' ... 712 0.0 2
(AP009608) Mycoplasma fermentans PG18 DNA, nearly complete g... 40 0.020 18
(AU284729) Dictyostelium discoideum gamete cDNA clone:FC-BI2... 42 0.021 2
(AM471608) Vitis vinifera contig VV78X258796.7, whole genome... 42 0.034 3
(AU272054) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 46 0.074 2
(AU272053) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 46 0.074 2
(AM456592) Vitis vinifera contig VV78X085916.10, whole genom... 44 0.10 2
(AM660636) Entamoeba moshkovskii FIC GSS, clone mosh102a12.p1k. 30 0.14 4
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 36 0.22 10
(BH162379) ENTTQ36TF Entamoeba histolytica Sheared DNA Entam... 40 0.24 2
(AL049916) Arabidopsis thaliana DNA *** SEQUENCING IN PROGRE... 36 0.57 7
(AL080252) Arabidopsis thaliana DNA chromosome 4, BAC clone ... 36 0.59 7
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 38 0.62 18
(EA684623) Sequence 63502 from patent US 7365185. 42 0.64 3
(EK575052) 1095521149482 Global-Ocean-Sampling_GS-32-01-01-1... 38 0.73 3
(AC147098) Mus musculus BAC clone RP23-452E7 from chromosome... 48 0.81 1
(AC120570) Rattus norvegicus 1 BAC CH230-96N8 (Children's Ho... 48 0.81 1
(AC111202) Mus musculus BAC clone RP23-338I3 from 9, complet... 48 0.81 1
(AC126192) Rattus norvegicus clone CH230-452N5, WORKING DRAF... 48 0.81 1
(EJ266358) 1095351015359 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.81 1
(DK966053) Papilio xuthus mRNA, clone: PxutEST_HY4m20, 3' en... 48 0.81 1
(DK966052) Papilio xuthus mRNA, clone: PxutEST_HY4m20, 5' en... 48 0.81 1
(CO685834) DG11-206b21 DG11-kidney Canis lupus familiaris cD... 48 0.81 1
(CK411807) AUF_IpHdk_46_o12 Head kidney cDNA library Ictalur... 48 0.81 1
(AE017308) Mycoplasma mobile 163K complete genome. 40 0.81 18
(AU272083) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 0.94 2
(EJ583394) 1092960193797 Global-Ocean-Sampling_GS-29-01-01-1... 42 0.96 2
(AU271910) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 0.97 2
(AC010916) Drosophila melanogaster clone BACR11A04, complete... 36 1.0 7
(AU271602) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU272082) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU275230) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU275192) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU275191) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU275117) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU275072) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU275013) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU275012) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272444) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272443) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272442) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272441) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272387) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272378) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272312) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272270) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272269) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272219) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272217) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272208) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272207) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272200) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272199) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272198) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272130) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272103) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272102) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272096) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272042) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU272041) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU272037) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU272036) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271987) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271986) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271972) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271971) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271952) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271951) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271921) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271920) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271909) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271864) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271768) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271724) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271723) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271698) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271601) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271595) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271535) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271534) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271513) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271416) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271415) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271318) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU272379) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272188) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272187) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU272185) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 1.0 2
(AU271865) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271687) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271686) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU271596) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.0 2
(AU272047) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 1.2 2
(AC005506) Plasmodium falciparum chromosome 12 clone PFYAC35... 36 1.5 8
(BF604626) 270535 MARC 3BOV Bos taurus cDNA 5', mRNA sequence. 32 1.6 3
(CA930342) MTU4CA.P21.D10 Aspen apex cDNA Library Populus tr... 38 2.0 2
(CA933677) MTU3TS.P10.H06 Aspen stem cDNA Library Populus tr... 38 2.0 2
(AM473026) Vitis vinifera contig VV78X181238.6, whole genome... 36 2.1 3
(CU570673) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 2.2 4
(EI435565) PV_GBa0029D14.r PV_GBa Phaseolus vulgaris genomic... 40 2.2 2
(AC145218) Medicago truncatula clone mth2-34l18, complete se... 36 2.3 6
(BJ416202) Dictyostelium discoideum cDNA clone:ddv25e10, 5' ... 42 2.4 2
(AC024617) Homo sapiens clone RP11-30D15, WORKING DRAFT SEQU... 44 2.5 5
(EK285361) 1095462310816 Global-Ocean-Sampling_GS-31-01-01-1... 42 2.6 2
(CR769767) Human DNA sequence from clone RP11-204M4 on chrom... 38 2.8 8
(CR769787) Zebrafish DNA sequence from clone DKEY-148G19 in ... 40 2.8 6
(AU060988) Dictyostelium discoideum slug cDNA, clone SLC529. 42 2.8 2
(AM285304) Spiroplasma citri GII3-3X chromosome, contig Cont... 38 3.0 12
(CG168601) PUFVA16TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 38 3.1 2
(AL807829) Zebrafish DNA sequence from clone CH211-246M4 in ... 46 3.2 1
(AC080066) Homo sapiens BAC clone CTD-2321M19 from 7, comple... 46 3.2 1
(AC016394) Homo sapiens chromosome 10 clone RP11-152N13, com... 46 3.2 1
(AC145005) Papio anubis clone RP41-253J20, WORKING DRAFT SEQ... 46 3.2 1
(AC180768) Strongylocentrotus purpuratus clone R3-3022O11, W... 46 3.2 1
(AC021459) Homo sapiens clone RP11-225L22, LOW-PASS SEQUENCE... 46 3.2 1
(EJ493869) 1095403559203 Global-Ocean-Sampling_GS-28-01-01-1... 46 3.2 1
(DE535518) Bombyx mori genomic DNA, Fosmid clone:GBMFno161_g... 46 3.2 1
(BG233811) daa28g07.x1 NICHD_XGC_Lu1 Xenopus laevis cDNA clo... 46 3.2 1
(ES730503) Nad03b_14_G07_C005.b1 Nuphar advena flower bud li... 46 3.2 1
(CP000998) Borrelia recurrentis A1 plasmid pl37, complete se... 46 3.2 1
(CP000977) Borrelia duttonii Ly plasmid pl11, partial sequence. 46 3.2 1
(AC004153) Plasmodium falciparum chromosome 12 clone PFYAC81... 30 3.2 9
(EJ722385) 1092959460561 Global-Ocean-Sampling_GS-30-02-01-1... 44 3.3 2
(AM778885) Microcystis aeruginosa PCC 7806 genome sequencing... 38 3.5 2
(AU271697) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 42 3.7 2
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699... 34 3.8 15
(AC021856) Homo sapiens BAC clone RP11-553E5 from 4, complet... 36 3.8 5
(AM433837) Vitis vinifera contig VV78X158041.3, whole genome... 34 4.1 4
(AM424082) Vitis vinifera contig VV78X137950.4, whole genome... 42 4.2 2
(AU272255) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 42 4.5 2
(AC014624) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 34 4.6 5
(AB079253) Dictyostelium discoideum Dd-gdcA mRNA, complete cds. 42 4.7 2
(CX580158) TTE00026330 Amplicon Express - Conjugative Form T... 36 4.9 3
(CX580166) TTE00031744 Amplicon Express - Conjugative Form T... 36 4.9 3
(CX583881) TTE00022163 Amplicon Express - Conjugative Form T... 36 5.2 3
(EC825742) SME00001566 esmbsro2 Sawyeria marylandensis cDNA,... 32 5.2 3
(CX581835) TTE00031081 Amplicon Express - Conjugative Form T... 36 5.2 3
(DY682658) TTEAF84THC Tetrahymena thermophila EST library, c... 36 5.3 3
(CX585879) TTE00026685 Amplicon Express - Conjugative Form T... 36 5.3 3
(AE014188) Plasmodium falciparum 3D7 chromosome 12, complete... 38 5.5 16
(CX590248) TTE00024518 Amplicon Express - Conjugative Form T... 36 5.6 3
(CX587777) TTE00035122 Amplicon Express - Conjugative Form T... 36 5.6 3
(CX584551) TTE00017191 Amplicon Express - Conjugative Form T... 36 5.6 3
(CX589040) TTE00030568 Amplicon Express - Conjugative Form T... 36 5.7 3
(CX589535) TTE00024384 Amplicon Express - Conjugative Form T... 36 5.8 3
(AL929267) Zebrafish DNA sequence from clone CH211-2M15 in l... 34 6.0 10
(AC137512) Mus musculus chromosome 12 clone RP24-323C12, com... 44 6.2 5
(CX591431) TTE00020503 Amplicon Express - Conjugative Form T... 36 6.4 3
(CX591619) TTE00029065 Amplicon Express - Conjugative Form T... 36 6.6 3
(FP103027) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 6.6 8
(AC097651) Homo sapiens chromosome 4 clone RP11-130F6, WORKI... 38 6.7 7
(AY653733) Acanthamoeba polyphaga mimivirus, complete genome. 36 6.8 19
(DL142444) High Throughput Proteomics. 38 6.8 3
(AZ547766) ENTGR30TF Entamoeba histolytica Sheared DNA Entam... 32 7.3 3
(AB079606) Dictyostelium discoideum Dd-gdcA gene, complete cds. 42 7.4 2
(FE212690) L033G03 Antarctic fish Dissostichus mawsoni adult... 36 7.5 2
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 34 7.5 13
(CU464029) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 7.7 6
(FP067336) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 7.7 2
(AC185987) Pan troglodytes BAC clone CH251-400P17 from chrom... 38 7.8 7
(AZ538975) ENTDM40TR Entamoeba histolytica Sheared DNA Entam... 32 7.8 3
(AE001362) Plasmodium falciparum 3D7 chromosome 2, complete ... 34 7.8 15
(AL446791) Paramecium tetraurelia sequence M22G10r of the en... 40 8.1 2
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 38 8.1 17
(BX545859) Campylobacter jejuni. 44 8.2 3
(FH882188) OSB_545002xc10f1.ab1 OSB_545 Nicotiana tabacum ge... 38 8.5 2
(BJ361756) Dictyostelium discoideum cDNA clone:ddc18j17, 5' ... 38 8.9 2
(AY662390) Strongyloides stercoralis transforming growth fac... 44 9.4 2
(BH999932) oei75e07.b1 B.oleracea002 Brassica oleracea genom... 38 9.5 2
>(BJ417662) Dictyostelium discoideum cDNA clone:ddv28i09, 5' end,
single read.
Length = 591
Score = 963 bits (486), Expect(2) = 0.0
Identities = 492/492 (100%)
Strand = Plus / Plus
Query: 100 tcaataatagtagttttaacagttgtggtactattatttaataatgaaaatattttagtt 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 tcaataatagtagttttaacagttgtggtactattatttaataatgaaaatattttagtt 159
Query: 160 gaagcacaagttggtaatctttgtattaaatgtttanaatttggtgaaagttgtaattca 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 gaagcacaagttggtaatctttgtattaaatgtttanaatttggtgaaagttgtaattca 219
Query: 220 aatggtgcttgtagtaaagatagtgtttgtncaagcgatactgaaagatttcaagaaaat 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 aatggtgcttgtagtaaagatagtgtttgtncaagcgatactgaaagatttcaagaaaat 279
Query: 280 cctgtttgttcagaaccaaaagaactcggtcaagattgtaaaaatgatgaacaatgtcgt 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 cctgtttgttcagaaccaaaagaactcggtcaagattgtaaaaatgatgaacaatgtcgt 339
Query: 340 ttgggaactaaatgtaaaaaagaattaaataatgaatttggttcttgttctgatattaaa 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ttgggaactaaatgtaaaaaagaattaaataatgaatttggttcttgttctgatattaaa 399
Query: 400 ttcgcacaagttggagaaaaatgttcacaagattttgattgttcaggtagacttttaaaa 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ttcgcacaagttggagaaaaatgttcacaagattttgattgttcaggtagacttttaaaa 459
Query: 460 tgtaaagaaggaatttgtgtaaaaccaactggtgatttaccatgtggtgtagagaatcca 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tgtaaagaaggaatttgtgtaaaaccaactggtgatttaccatgtggtgtagagaatcca 519
Query: 520 tgtccatttggtgaatactgtcaatattcaagcaaaacttgtaataaacaattaaaagaa 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tgtccatttggtgaatactgtcaatattcaagcaaaacttgtaataaacaattaaaagaa 579
Query: 580 aatgataattgt 591
||||||||||||
Sbjct: 580 aatgataattgt 591
Score = 46.1 bits (23), Expect(2) = 0.0
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 gataaaaataatttattattttc 23
|||||||||||||||||||||||
Sbjct: 1 gataaaaataatttattattttc 23
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 1,460,074,448
Number of extensions: 94004814
Number of successful extensions: 8211882
Number of sequences better than 10.0: 177
Length of query: 1166
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 1142
Effective length of database: 104,103,628,548
Effective search space: 118886343801816
Effective search space used: 118886343801816
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home