Homology Contig-U09764-1 vs Protein
Query= Contig-U09764-1 (Contig-U09764-1Q) /CSM_Contig/Contig-U09764-1Q.Seq.d
(1283 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54J90) RecName: Full=Uncharacterized protein DDB_G0288213; 72 3e-26
BT062070_1(BT062070|pid:none) Zea mays full-length cDNA clone ZM... 36 3.4
>(Q54J90) RecName: Full=Uncharacterized protein DDB_G0288213;
Length = 95
Score = 72.0 bits (175), Expect(3) = 3e-26
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +1
Query: 751 MVSTNNELSTEKKLNNLEYFPMNNNENFNRDEM 849
MVSTNNELSTEKKLNNLEYFPMNNNENFNRDEM
Sbjct: 1 MVSTNNELSTEKKLNNLEYFPMNNNENFNRDEM 33
Score = 57.4 bits (137), Expect(3) = 3e-26
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +2
Query: 899 KLDKLKKPLKENKSTGSKILNFLKKFIENDGE*KSDT 1009
++ ++KK LKENKSTGSKILNFLKKFIENDGE ++ T
Sbjct: 50 QIRQIKKELKENKSTGSKILNFLKKFIENDGENQTQT 86
Score = 34.3 bits (77), Expect(3) = 3e-26
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 996 ENQTQTLKVKMNFVY 1040
ENQTQTLKVKMNFVY
Sbjct: 81 ENQTQTLKVKMNFVY 95
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,173,371,976
Number of extensions: 16988396
Number of successful extensions: 52962
Number of sequences better than 10.0: 2
Number of HSP's gapped: 52853
Number of HSP's successfully gapped: 4
Length of query: 427
Length of database: 1,040,966,779
Length adjustment: 131
Effective length of query: 296
Effective length of database: 621,205,444
Effective search space: 183876811424
Effective search space used: 183876811424
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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