Dictyostelium discoideum cDNA Contig-U09764-1

Assembled

Chromosomal Location of Contig-U09764-1

Sequence Contig-U09764-1

AAATCAAAGT TATTCATAAA AAATGAAATT CATTGTATCT TTATTAGTTG
CTGTATTATT ATTTGTTGGT ATTACAAATG CTGCAAGCTG TTCATCAAAT
AGAAATGCAT TTTATTGTGC ATTAAATTCT CCACCATGCT TTTGGAAAGC
TTTAGGTCAT AATAAATTTG CTTGTGTTGC AATTAGAAGA GAATCAGCTC
TTGATGCAAT TGAAAATGCA GTTGAAGTAA CTGAAGAATA CCAAGGTAAT
AGTGTTTGTT CTTATCCTTT CCGAATCAAT TTGTAATGAA AGTTCACAAT
ATGGTTGTCA ATGGGAAAAT GAATCATGTA ATAAAGTTGA AGGTGAACAA
GAAAGTTTAA AGAAGTTTTG TGAATCAATT AAAGGTAAAT TAAGTTGTGT
TTTATCAAAT TGCCAATGGA GTGACAATCA TTGTCATTAT TAATAGTTTA
TTTTTTAAAA ATTAATTATA AAGTTTAAAT AAATTTTTTT TTTTA-----
-----CCTAA CATTATTAAA TTTTATTTTA TAGTTGAAAC TCTTAGCAAC
AACATACATT CATACAAATT ATAATATTTT CATAAATAAA TAATAAACTA
TTAAATAAAT ATAAATAAAT ATAAATAAGT AAATAAATAA ATAAATAAAT
AAATAAATAA ATAAATTAAT AAAATAAAAT AAAATAAAAT AAAATAAAAT
AAAATAAAAT ACAATAAATA AATAAATAAA ACAAATAAAC ATATAAAAAA
ATGGTCTCAA CAAATAATGA ATTATCAACT GAAAAGAAAT TAAATAACCT
TGAATATTTT CCAATGAATA ATAACGAAAA TTTCAACCGT GATGAAATGA
GAAGAATTCG TAGACAAAGA CAACAACAAC ACCTACAACA ACAATATCAA
ATTAGACAAA TTAAAAAAGC CATTAAAAGA AAATAAATCA ACTGGTTCAA
AGATTTTAAA TTTTTTAAAA AAGTTTATAG AAAATGATGG TGAATGAAAA
TCAGACACAA ACTTTAAAAG TTAAAATGAA TTTTGTATAT TAAATTAAAA
AAAAAAAAAA AAAAAAAAAA ATAGAAATAG TTCTCTCAAC TATTCTTTTC
GATTAGTTTA TTGGGATTGT TTAATGTATA TATAAAAAAA AAATAAAAAA
ACATCCCGAA CAACAAGTTC ACACACCTAC CTTTTAAAAA AGTGTGGTGC
GATTTTAAAT AAAAAATTAA AAATTAAATT AAATAAAAAA TTAAATAAAA
AATTAAATAA AAAATTAAAA ATTAAAAAAA CAA

Translated Amino Acid Sequence Contig-U09764-1

ksklfikneihcifiscciiicwyykccklfik*kcillcikfstmllesfrs**iclcc
n*kriss*cn*kcs*sn*ripr**clflsfpnqfvmkvhnmvvngkmnhviklkvnkkv*
rsfvnqlkvn*vvfyqiangvtiiviinslffkn*l*SLNKFFFL---

---PNIIKFYFIVETLSNNIHSYKL*yfhk*iiny*ininkyk*vnk*ink*ink*inki
k*nkik*nkikynk*inktnkhikkwsqqimnyqlkrn*itlnifq*iitkistvmk*ee
fvdkdnnntynnnikldklkkplkenkstgskilnflkkfiendge*ksdtnfks*nefc
iln*kkkkkkknrnsslnysfrlvywdclmyi*kknkktsrttsshtyllkkcgailnkk
lkiklnkklnkklnkklkikkt

Homology Contig-U09764-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U09764-1 (Contig-U09764-1Q) /CSM_Contig/Conti...   957  0.0
Contig-U13974-1 (Contig-U13974-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U12214-1 (Contig-U12214-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U12311-1 (Contig-U12311-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U11341-1 (Contig-U11341-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U13867-1 (Contig-U13867-1Q) /CSM_Contig/Conti...    38  0.023
Contig-U13298-1 (Contig-U13298-1Q) /CSM_Contig/Conti...    38  0.023
Contig-U09602-1 (Contig-U09602-1Q) /CSM_Contig/Conti...    38  0.023
Contig-U09312-1 (Contig-U09312-1Q) /CSM_Contig/Conti...    38  0.023
Contig-U06513-1 (Contig-U06513-1Q) /CSM_Contig/Conti...    38  0.023

Homology Contig-U09764-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ416886) Dictyostelium discoideum cDNA clone:ddv27l16, 5' ...   527   0.0    2
(AU265291) Dictyostelium discoideum vegetative cDNA clone:VS...   422   0.0    2
(C94293) Dictyostelium discoideum slug cDNA, clone SSK749.        220   e-117  4
(AU265292) Dictyostelium discoideum vegetative cDNA clone:VS...   264   1e-96  2
(AU271104) Dictyostelium discoideum vegetative cDNA clone:VS...   220   8e-76  2
(BJ435607) Dictyostelium discoideum cDNA clone:ddv27l16, 3' ...   220   8e-73  2
(AU271105) Dictyostelium discoideum vegetative cDNA clone:VS...   141   8e-29  1
(AU074448) Dictyostelium discoideum slug cDNA, clone SSK749.       90   3e-13  1
(EA661786) Sequence 40665 from patent US 7365185.                  38   0.042  3
(ED728320) GM_WBb0084E20.f GM_WBb Glycine max genomic clone ...    50   0.22   1

Homology Contig-U09764-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54J90) RecName: Full=Uncharacterized protein DDB_G0288213;           72   3e-26
BT062070_1(BT062070|pid:none) Zea mays full-length cDNA clone ZM...    36   3.4