Homology Contig-U09764-1 vs DNA
Query= Contig-U09764-1 (Contig-U09764-1Q) /CSM_Contig/Contig-U09764-1Q.Seq.d
(1283 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ416886) Dictyostelium discoideum cDNA clone:ddv27l16, 5' ... 527 0.0 2
(AU265291) Dictyostelium discoideum vegetative cDNA clone:VS... 422 0.0 2
(C94293) Dictyostelium discoideum slug cDNA, clone SSK749. 220 e-117 4
(AU265292) Dictyostelium discoideum vegetative cDNA clone:VS... 264 1e-96 2
(AU271104) Dictyostelium discoideum vegetative cDNA clone:VS... 220 8e-76 2
(BJ435607) Dictyostelium discoideum cDNA clone:ddv27l16, 3' ... 220 8e-73 2
(AU271105) Dictyostelium discoideum vegetative cDNA clone:VS... 141 8e-29 1
(AU074448) Dictyostelium discoideum slug cDNA, clone SSK749. 90 3e-13 1
(EA661786) Sequence 40665 from patent US 7365185. 38 0.042 3
(ED728320) GM_WBb0084E20.f GM_WBb Glycine max genomic clone ... 50 0.22 1
(CZ521689) GMW2-84E20a.b1 GMW2 Glycine max genomic, genomic ... 50 0.22 1
(ER623297) 1093017478275 Global-Ocean-Sampling_GS-36-01-01-2... 48 0.89 1
(ER566999) 1093015774124 Global-Ocean-Sampling_GS-36-01-01-2... 48 0.89 1
(EJ715718) 1092959415108 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.89 1
(CX679912) ydb62b08.y2 Sea urchin EST Lib1 Strongylocentrotu... 48 0.89 1
(AC022075) Homo sapiens 12 BAC RP11-277P12 (Roswell Park Can... 42 0.93 6
(EA694005) Sequence 72884 from patent US 7365185. 38 1.2 3
(AC176335) Strongylocentrotus purpuratus clone R3-3053M1, WO... 44 1.7 3
(AC006858) Caenorhabditis elegans clone Y47D9X, *** SEQUENCI... 46 2.0 5
(EJ419625) 1093012221857 Global-Ocean-Sampling_GS-28-01-01-1... 36 2.1 3
(DE403044) Bombyx mori genomic DNA, BAC clone:3L2H. 36 2.2 2
(AJ426041) Chrysomya megacephala mitochondrial NADH2 gene, C... 44 2.7 3
(ER344439) 1092344370850 Global-Ocean-Sampling_GS-34-01-01-1... 42 3.3 2
(BX005121) Zebrafish DNA sequence from clone DKEY-5E16 in li... 46 3.5 1
(AC206363) Pan troglodytes chromosome X clone CH251-30B20 ma... 46 3.5 1
(AM473545) Vitis vinifera contig VV78X043451.14, whole genom... 46 3.5 1
(EU493897) Drosophila equinoxialis voucher 107548 cytochrome... 46 3.5 1
(EU493888) Drosophila affinis voucher 107540 cytochrome c ox... 46 3.5 1
(EU493869) Drosophila navojoa voucher 105433 ATP synthase F0... 46 3.5 1
(AL021176) Caenorhabditis elegans YAC Y43E12A. 46 3.5 1
(AC006666) Caenorhabditis elegans fosmid H31G24, complete se... 46 3.5 1
(AC087534) Homo sapiens chromosome 18, clone RP11-716B20, co... 46 3.5 1
(AC009891) Genomic Sequence for Homo sapiens clone H_NH0332F... 46 3.5 1
(CU571124) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.5 1
(AP001777) Homo sapiens genomic DNA, chromosome 18q22 clone:... 46 3.5 1
(AC183250) Bos taurus clone CH240-97F10, WORKING DRAFT SEQUE... 46 3.5 1
(AC179110) Strongylocentrotus purpuratus clone R3-4011F24, W... 46 3.5 1
(AC177099) Strongylocentrotus purpuratus clone R3-4012L22, W... 46 3.5 1
(AC006901) Caenorhabditis elegans clone Y74A11X, *** SEQUENC... 46 3.5 1
(AZ924468) 4906.ic28n09.s1 Saccharomyces mikatae IFO 1815 Sa... 46 3.5 1
(ER596847) 1093016225666 Global-Ocean-Sampling_GS-36-01-01-2... 46 3.5 1
(ER314522) 1092344129984 Global-Ocean-Sampling_GS-34-01-01-1... 46 3.5 1
(GH245141) EST_eluc_evq_1016534 elucevq mixed_tissue Esox lu... 46 3.5 1
(GH245140) EST_eluc_evq_1001174 elucevq mixed_tissue Esox lu... 46 3.5 1
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 46 3.5 1
(AE008691) Thermoanaerobacter tengcongensis MB4, complete ge... 46 3.5 1
(AC173718) Strongylocentrotus purpuratus clone R3-1030P9, **... 42 4.2 2
(DQ866051) Trichophthalma punctata mitochondrion, complete g... 44 4.2 2
(AC175828) Medicago truncatula chromosome 2 BAC clone mte1-5... 34 8.1 5
(AC018994) Homo sapiens chromosome 18, clone RP11-619L19, co... 38 9.5 5
(FB571359) Sequence 226 from Patent EP1865317. 36 9.6 10
>(BJ416886) Dictyostelium discoideum cDNA clone:ddv27l16, 5' end,
single read.
Length = 500
Score = 527 bits (266), Expect(2) = 0.0
Identities = 266/266 (100%)
Strand = Plus / Plus
Query: 1 aaatcaaagttattcataaaaaatgaaattcattgtatctttattagttgctgtattatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaatcaaagttattcataaaaaatgaaattcattgtatctttattagttgctgtattatt 60
Query: 61 atttgttggtattacaaatgctgcaagctgttcatcaaatagaaatgcattttattgtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atttgttggtattacaaatgctgcaagctgttcatcaaatagaaatgcattttattgtgc 120
Query: 121 attaaattctccaccatgcttttggaaagctttaggtcataataaatttgcttgtgttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attaaattctccaccatgcttttggaaagctttaggtcataataaatttgcttgtgttgc 180
Query: 181 aattagaagagaatcagctcttgatgcaattgaaaatgcagttgaagtaactgaagaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aattagaagagaatcagctcttgatgcaattgaaaatgcagttgaagtaactgaagaata 240
Query: 241 ccaaggtaatagtgtttgttcttatc 266
||||||||||||||||||||||||||
Sbjct: 241 ccaaggtaatagtgtttgttcttatc 266
Score = 335 bits (169), Expect(2) = 0.0
Identities = 169/169 (100%)
Strand = Plus / Plus
Query: 267 ctttccgaatcaatttgtaatgaaagttcacaatatggttgtcaatgggaaaatgaatca 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctttccgaatcaatttgtaatgaaagttcacaatatggttgtcaatgggaaaatgaatca 325
Query: 327 tgtaataaagttgaaggtgaacaagaaagtttaaagaagttttgtgaatcaattaaaggt 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgtaataaagttgaaggtgaacaagaaagtttaaagaagttttgtgaatcaattaaaggt 385
Query: 387 aaattaagttgtgttttatcaaattgccaatggagtgacaatcattgtc 435
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aaattaagttgtgttttatcaaattgccaatggagtgacaatcattgtc 434
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 1,154,118,007
Number of extensions: 74640827
Number of successful extensions: 6628911
Number of sequences better than 10.0: 52
Length of query: 1283
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 1259
Effective length of database: 104,103,628,548
Effective search space: 131066468341932
Effective search space used: 131066468341932
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home