Homology Contig-U09703-1 vs Protein
Query= Contig-U09703-1 (Contig-U09703-1Q) /CSM_Contig/Contig-U09703-1Q.Seq.d
(1796 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CP000817_2877(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 62 2e-10
CP000728_267(CP000728|pid:none) Clostridium botulinum F str. Lan... 64 2e-10
CU207366_170(CU207366|pid:none) Gramella forsetii KT0803 complet... 60 3e-10
CP000962_932(CP000962|pid:none) Clostridium botulinum A3 str. Lo... 55 2e-09
CP000939_292(CP000939|pid:none) Clostridium botulinum B1 str. Ok... 59 3e-09
CP001056_2300(CP001056|pid:none) Clostridium botulinum B str. Ek... 57 1e-08
BA000030_4088(BA000030|pid:none) Streptomyces avermitilis MA-468... 59 4e-07
AC007060_16(AC007060|pid:none) Arabidopsis thaliana chromosome 1... 57 3e-06
CP000090_1621(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 55 6e-06
CP001083_267(CP001083|pid:none) Clostridium botulinum Ba4 str. 6... 45 1e-05
AM412317_264(AM412317|pid:none) Clostridium botulinum A str. ATC... 47 1e-05
AY057687_1(AY057687|pid:none) Arabidopsis thaliana At1g30760/T5I... 51 2e-05
CP001581_269(CP001581|pid:none) Clostridium botulinum A2 str. Ky... 45 2e-05
CU633457_146(CU633457|pid:none) Podospora anserina genomic DNA c... 41 5e-05
FB863163_1(FB863163|pid:none) Sequence 82436 from Patent WO20080... 52 5e-05
CP000312_382(CP000312|pid:none) Clostridium perfringens SM101, c... 52 7e-05
CP000721_3889(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 52 9e-05
(P30986) RecName: Full=Reticuline oxidase; EC=1.21.3.3;... 44 1e-04
AM920427_1417(AM920427|pid:none) Penicillium chrysogenum Wiscons... 49 5e-04
CP000817_3900(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 49 5e-04
CU633895_42(CU633895|pid:none) Podospora anserina genomic DNA ch... 49 6e-04
AM420293_3956(AM420293|pid:none) Saccharopolyspora erythraea NRR... 49 6e-04
EF146904_1(EF146904|pid:none) Populus trichocarpa clone WS0121_N... 44 9e-04
AM269950_23(AM269950|pid:none) Aspergillus niger contig An01c003... 48 0.001
A71641_1(A71641|pid:none) Sequence 74 from Patent WO9813478. 44 0.001
AM260480_1585(AM260480|pid:none) Ralstonia eutropha H16 chromoso... 47 0.002
CP000667_4058(CP000667|pid:none) Salinispora tropica CNB-440, co... 47 0.002
AP007167_550(AP007167|pid:none) Aspergillus oryzae RIB40 genomic... 47 0.003
AB011475_16(AB011475|pid:none) Arabidopsis thaliana genomic DNA,... 42 0.003
AJ871581_55(AJ871581|pid:none) Streptomyces achromogenes subsp. ... 46 0.004
CP001186_3138(CP001186|pid:none) Bacillus cereus G9842, complete... 45 0.007
AM920437_2487(AM920437|pid:none) Penicillium chrysogenum Wiscons... 45 0.009
CS078365_2(CS078365|pid:none) Sequence 1 from Patent EP1525798. 45 0.009
CP000560_502(CP000560|pid:none) Bacillus amyloliquefaciens FZB42... 45 0.011
CP001581_236(CP001581|pid:none) Clostridium botulinum A2 str. Ky... 40 0.011
CP000091_946(CP000091|pid:none) Ralstonia eutropha JMP134 chromo... 40 0.024
(P93472) RecName: Full=Cell elongation protein diminuto; &D8649... 44 0.025
AF325121_1(AF325121|pid:none) Pisum sativum brassinosteroid bios... 44 0.025
AM269954_16(AM269954|pid:none) Aspergillus niger contig An01c007... 37 0.031
DQ318817_1(DQ318817|pid:none) Glycine max FAD-linked oxidoreduct... 35 0.031
CP001176_351(CP001176|pid:none) Bacillus cereus B4264, complete ... 43 0.033
AC147501_11(AC147501|pid:none) Medicago truncatula clone mth2-12... 37 0.040
FB863109_1(FB863109|pid:none) Sequence 82382 from Patent WO20080... 43 0.043
AB078977_1(AB078977|pid:none) Aspergillus oryzae mreB mRNA for p... 42 0.056
AE017194_478(AE017194|pid:none) Bacillus cereus ATCC 10987, comp... 42 0.056
CP000282_518(CP000282|pid:none) Saccharophagus degradans 2-40, c... 42 0.056
AY584532_1(AY584532|pid:none) Lycopersicon esculentum DWARF1/DIM... 42 0.073
AP007154_551(AP007154|pid:none) Aspergillus oryzae RIB40 genomic... 42 0.073
CP000512_2009(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 42 0.073
AL807366_4(AL807366|pid:none) Neurospora crassa DNA linkage grou... 42 0.073
AM451867_1(AM451867|pid:none) Vitis vinifera contig VV78X006278.... 42 0.073
BT039602_1(BT039602|pid:none) Zea mays full-length cDNA clone ZM... 35 0.087
AB048606_1(AB048606|pid:none) Aspergillus oryzae mreA gene for i... 42 0.095
FB863225_1(FB863225|pid:none) Sequence 82498 from Patent WO20080... 42 0.095
AB292682_1(AB292682|pid:none) Cannabis sativa CBDAS mRNA for can... 32 0.11
CP001176_2824(CP001176|pid:none) Bacillus cereus B4264, complete... 41 0.12
AP011115_385(AP011115|pid:none) Rhodococcus opacus B4 DNA, compl... 41 0.16
A71586_1(A71586|pid:none) Sequence 19 from Patent WO9813478. 41 0.16
AM270232_40(AM270232|pid:none) Aspergillus niger contig An11c015... 41 0.16
AM443436_1(AM443436|pid:none) Vitis vinifera contig VV78X234766.... 41 0.16
EF125025_5(EF125025|pid:none) Neotyphodium lolii strain Lp19 EAS... 40 0.21
AM270337_8(AM270337|pid:none) Aspergillus niger contig An15c0100... 40 0.21
AP009493_626(AP009493|pid:none) Streptomyces griseus subsp. gris... 40 0.28
AF127374_9(AF127374|pid:none) Streptomyces lavendulae LinA-like,... 40 0.28
CT573213_4534(CT573213|pid:none) Frankia alni str. ACN14A chromo... 40 0.28
DQ838002_23(DQ838002|pid:none) Streptomyces lavendulae strain NR... 40 0.36
AM920435_1344(AM920435|pid:none) Penicillium chrysogenum Wiscons... 40 0.36
AC147501_15(AC147501|pid:none) Medicago truncatula clone mth2-12... 38 0.40
CP001341_1738(CP001341|pid:none) Arthrobacter chlorophenolicus A... 37 0.40
AC020622_11(AC020622|pid:none) Sequence of BAC F22M8 from Arabid... 39 0.47
AK220962_1(AK220962|pid:none) Arabidopsis thaliana mRNA for hypo... 39 0.47
AM270128_75(AM270128|pid:none) Aspergillus niger contig An07c010... 39 0.47
(Q796Y5) RecName: Full=Uncharacterized FAD-linked oxidoreductase... 39 0.47
AC004238_2(AC004238|pid:none) Arabidopsis thaliana chromosome 2 ... 39 0.47
F69816(F69816) reticuline oxidase homolog ygaK - Bacillus subtil... 39 0.62
EU121853_1(EU121853|pid:none) Clavicipitaceae sp. US2005a putati... 39 0.62
AF364866_1(AF364866|pid:none) Helianthus annuus carbohydrate oxi... 39 0.62
Z82044_15(Z82044|pid:none) Bacillus subtilis 25 kb genomic DNA s... 39 0.62
AP007157_53(AP007157|pid:none) Aspergillus oryzae RIB40 genomic ... 39 0.62
EU301739_13(EU301739|pid:none) Actinomadura kijaniata fructokina... 39 0.62
CP000431_254(CP000431|pid:none) Rhodococcus jostii RHA1, complet... 39 0.62
AJ512487_1(AJ512487|pid:none) Phleum pratense partial phlp4 gene... 29 0.67
AF424621_1(AF424621|pid:none) Arabidopsis thaliana AT4g20830/F21... 39 0.81
CP000431_4163(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 39 0.81
(Q9SVG4) RecName: Full=Reticuline oxidase-like protein; ... 39 0.81
AC007060_22(AC007060|pid:none) Arabidopsis thaliana chromosome 1... 35 0.87
AY610511_1(AY610511|pid:none) Thalictrum flavum subsp. glaucum b... 38 1.1
AM920436_951(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 38 1.1
AJ416696_1(AJ416696|pid:none) Plasmodium falciparum mRNA for put... 38 1.1
AE014188_263(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 38 1.1
CP000769_1590(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 38 1.4
CU640366_810(CU640366|pid:none) Podospora anserina genomic DNA c... 38 1.4
CU633749_947(CU633749|pid:none) Cupriavidus taiwanensis str. LMG... 38 1.4
DQ122178_1(DQ122178|pid:none) Gossypium hirsutum brassinosteroid... 38 1.4
AP008957_1951(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 38 1.4
CP000390_346(CP000390|pid:none) Mesorhizobium sp. BNC1, complete... 38 1.4
AF513859_1(AF513859|pid:none) Gossypium hirsutum ovule/fiber cel... 38 1.4
AM156932_22(AM156932|pid:none) Streptomyces steffisburgensis clu... 37 1.8
AJ628018_47(AJ628018|pid:none) Streptomyces sp. SCC 2136 deoxysu... 37 1.8
EU805511_1(EU805511|pid:none) Elaeis guineensis putative cell el... 37 2.4
CR628337_1619(CR628337|pid:none) Legionella pneumophila str. Len... 37 2.4
AC004135_1(AC004135|pid:none) Genomic sequence for Arabidopsis t... 37 2.4
AP011115_4135(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 37 2.4
CR628336_1390(CR628336|pid:none) Legionella pneumophila str. Par... 37 2.4
AL670008_15(AL670008|pid:none) Neurospora crassa DNA linkage gro... 37 2.4
AM270057_18(AM270057|pid:none) Aspergillus niger contig An03c016... 37 2.4
DQ087286_5(DQ087286|pid:none) Saccharopolyspora pogona BusF (bus... 37 3.1
AJ561198_35(AJ561198|pid:none) Actinomadura sp. ATCC 39727 gene ... 37 3.1
CR378677_145(CR378677|pid:none) Photobacterium profundum SS9 chr... 37 3.1
AE016877_2793(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 37 3.1
CP001191_1973(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 37 3.1
AM270218_23(AM270218|pid:none) Aspergillus niger contig An11c001... 36 4.0
CP001068_3651(CP001068|pid:none) Ralstonia pickettii 12J chromos... 36 4.0
EU964752_1(EU964752|pid:none) Zea mays clone 281342 hypothetical... 36 5.2
FB863107_1(FB863107|pid:none) Sequence 82380 from Patent WO20080... 36 5.2
AM269981_9(AM269981|pid:none) Aspergillus niger contig An01c0340... 36 5.2
AL844506_49(AL844506|pid:none) Plasmodium falciparum 3D7 chromos... 36 5.2
A86391(A86391) hypothetical protein T1K7.20 - Arabidopsis thalia... 36 5.2
CU633872_237(CU633872|pid:none) Podospora anserina genomic DNA c... 36 5.2
CP000133_2316(CP000133|pid:none) Rhizobium etli CFN 42, complete... 36 5.2
FB863237_1(FB863237|pid:none) Sequence 82510 from Patent WO20080... 36 5.2
AP007150_466(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 35 6.8
CP000792_1115(CP000792|pid:none) Campylobacter concisus 13826, c... 35 6.8
CP000854_1166(CP000854|pid:none) Mycobacterium marinum M, comple... 35 6.8
AP007159_237(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 35 6.8
AC108884_18(AC108884|pid:none) Oryza sativa (japonica cultivar-g... 35 6.8
AB183698_1(AB183698|pid:none) Cannabis sativa gene for tetrahydr... 35 8.9
AC116960_25(AC116960|pid:none) Dictyostelium discoideum chromoso... 35 8.9
AB008466_19(AB008466|pid:none) Streptomyces galilaeus aklavinone... 35 8.9
CU633448_16(CU633448|pid:none) Podospora anserina genomic DNA ch... 35 8.9
AF257324_15(AF257324|pid:none) Streptomyces galilaeus aclacinomy... 35 8.9
>CP000817_2877(CP000817|pid:none) Lysinibacillus sphaericus C3-41,
complete genome.
Length = 454
Score = 62.4 bits (150), Expect(2) = 2e-10
Identities = 95/421 (22%), Positives = 159/421 (37%), Gaps = 15/421 (3%)
Frame = +3
Query: 534 IDLSSLKGIEIDXXXXXXXXXXXXXXIELYNXXXXXXXXXXXGSCPTVGM-GVVLXXXXX 710
ID+S L + ++ ++Y+ G+CPTVG+ G L
Sbjct: 88 IDISRLNAMSLEKKEDVLTIEAGAKNSDVYDFIGSNGYVFPGGTCPTVGVSGFTLGGGWG 147
Query: 711 XXXXXXXXMADNILEFTVVLEDGSIVKANPKNKYSDLYWALAXXXXXXXXXXXDYKIKVY 890
D+++E +V +G I+KAN KN SDL+WA ++
Sbjct: 148 FSSRLYGLGCDSLIELELVDFEGRIIKAN-KNCNSDLFWACRGAGGGNFGVVVSMTFQL- 205
Query: 891 PIPQYFYKNTIRFDIVNLDKA--LALLDSYVRSATEQTRENIYANMYSQLTLKSANMTPS 1064
P P IRF VN KA L ++D + +N + ++TL
Sbjct: 206 PKPIKGPVTLIRFFYVNTTKAKQLEVMDIW---------QNWLPELDKRMTL-------- 248
Query: 1065 ASITFFYNGPLEEGDFEFRKLLTGFLCPPSN---PTCTPLGKVTTMDIQTLKKTFWEVIS 1235
+ FYN EEG F TGF S P K+ + + +F E +
Sbjct: 249 --VASFYNTE-EEGLGIFA---TGFFYGSSRLAKKILQPFAKIEGFRMNLEELSFLEAVK 302
Query: 1236 SMSYDNNPLRQF-TKGRFVKKLSKNDVPKAINDFYKYAVTNIINSTSLVKPETLLNINQA 1412
+ P +F + GRFV++ Y + N LV+ ++ A
Sbjct: 303 RVEATYPPFEKFKSTGRFVQR--------------SYTSDELENIGRLVESPPNGSVYAA 348
Query: 1413 IFYH--GGKQNQDRTGSIDSPFNSFLHR------GDEAMWSYTIVAQYNNTENDPLFSGL 1568
I ++ GG N +ID +F +R G +++W A+ N F +
Sbjct: 349 ISFYALGGAIN-----NIDKNETAFYYRDAKYIMGIQSVWIDDRYAKGNQEWVRERFEII 403
Query: 1569 RKLVNSKLSSIGDKLNNNYPDDEFEDWQTGLYVTKSNYKKLQEIKGKYDPNNYFNYPQSI 1748
+K+ N+P ++++ + N ++L +K KYDP N F +PQ +
Sbjct: 404 KKMTKGSYV--------NFPISHLKNFEKEYF--GGNAQRLNRVKSKYDPLNVFRFPQGL 453
Query: 1749 E 1751
+
Sbjct: 454 K 454
Score = 28.1 bits (61), Expect(2) = 2e-10
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = +2
Query: 245 LITINQISKTQAVQCVDYNNPNYYKFINPLMNNXAYCYIKPTNASEISDAILYAQSINKG 424
+ITI + +A Q ++N N KF PL+ YC IK ++ +A+L+A+ G
Sbjct: 18 VITIKNPNYDEARQ--EWNRANQ-KF--PLV--IVYCEIK----QDVVNAVLWARRHCIG 66
Query: 425 VSIKSGGHSATQFS 466
+ I+SGGH +S
Sbjct: 67 IRIRSGGHHYEGYS 80
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,253,522,006
Number of extensions: 42015379
Number of successful extensions: 93801
Number of sequences better than 10.0: 131
Number of HSP's gapped: 93690
Number of HSP's successfully gapped: 170
Length of query: 598
Length of database: 1,040,966,779
Length adjustment: 134
Effective length of query: 464
Effective length of database: 611,592,589
Effective search space: 283778961296
Effective search space used: 283778961296
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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