Dictyostelium discoideum cDNA Contig-U09703-1

Assembled

Chromosomal Location of Contig-U09703-1

Sequence Contig-U09703-1

TTATAATAAT AAATTGTACC ATTAAAATTG TATTTCCATA AAAACTAATA
AAAATATTGT AATAATAAAT AAAATAAAAT AAAATAACCT TTTTGTATTT
TTAATAATAA AAAAAAAAAA AAAACCATAA ACATATTGTA TTAAAAAAAA
AAAAAAAAAA AAAAAAAAAA AAATAATAAT TAAATAATAT TTTTTAAAAA
ATAAAATGAA ATTAAATAAT ATTTTATTAT TTTTATCATT TGTATTAATT
ACTATTAATC AAATTTCAAA AACTCAAGCC GTCCAATGTG TTGATTATAA
TAATCCAAAT TATTATAAAT TTATTAATCC ATTAATGAAT AATANAGCAT
ACTGTTATAT TAAACCAACN AATGCTTCTG AAATTAGTGA TGCAATTTTA
TATGCACAAA GTATTAATAA AGGTGTATCA ATTAAATCAG GTGGTCATTC
AGCAACACAA TTTTCAATGT TAAATAAAAC TGTTAATA-- --------GC
AACACAATTT TNATGTTAAA TAAAACTGTT AATATTGATT TAAGTTCATT
AAAAGGTATT GAAATTGATG TTGAAGCTCA AACTGTTGTT GTACAAGCTG
GTGTACAAGT TATTGAATTA TATAATGCCA CAACTAAATT ATTATTGGCA
ACAACTGCTG GTAGTTGTCC AACTGTTGGT ATGGGTGTTG TATTGGGTGG
TGGATCAAAT TACTTTGGTG GTAAATATGG TTATATGGCT GATAACATAT
TAGAATTCAC CGTTGTACTT GAAGATGGTT CAATTGTTAA AGCCAATCCA
AAGAATAAAT ATAGTGACCT CTATTGGGCA TTGGCTGGTT CTGGTGGTGG
TGGTTTTGGT GTTGTTGTAG ATTACAAAAT TAAAGTTTAC CCAATTCCAC
AATACTTTTA CAAGAATACC ATTCGTTTCG ATATTGTCAA TTTAGATAAA
GCTCTCGCCT TATTGGATTC TTATGTACGT TCTGCCACTG AACAAACTCG
TGAAAATATC TATGCCAATA TGTATTCTCA ATTAACTTTG AAATCCGCAA
ATATGACTCC ATCCGCTAGT ATTACATTCT TTTACAATGG TCCACTTGAA
GAGGGCGATT TCGAATTCAG AAAATTGTTA ACCGGTTTCC TTTGTCCACC
ATCAAATCCA ACCTGTACAC CATTGGGTAA AGTCACCACC ATGGATATCC
AAACTTTAAA GAAAACATTC TGGGAAGTCA TTAGCTCAAT GAGTTATGAT
AATAATCCAT TAAGACAATT CACCAAAGGA AGATTCGTTA AGAAATTATC
TAAAAACGAT GTACCAAAGG CTATCAACGA TTTCTATAAA TATGCCGTCA
CCAATATCAT CAATTCAACC TCTTTAGTTA AACCAGAAAC ATTGTTAAAT
ATTAATCAAG CTATTTTCTA TCATGGTGGT AAACAAAATC AAGATAGAAC
TGGTTCAATC GATTCTCCAT TCAATTCTTT CCTTCACAGA GGTGATGAAG
CTATGTGGTC ATACACTATT GTCGCTCAAT ATAATAACAC TGAAAATGAT
CCATTATTCT CTGGTCTTAG AAAACTTGTA AACTCTAAAC TCTCTTCAAT
TGGTGATAAA TTAAATAATA ACTATCCAGA TGATGAATTT GAAGATTGGC
AAACCGGACT CTATGTCACC AAATCAAATT ATAAAAAACT TCAAGAAATT
AAAGGAAAAT ATGATCCAAA TAATTATTTT AATTATCCAC AATCAATTGA
ATTACCAAAG AAATAAATAA ATTTAATAAT TAAATTAAAC AATTAA

Translated Amino Acid Sequence Contig-U09703-1

ynnklyh*ncisiktnkniviinkik*nnlfvfliikkkkkp*tycikkkkkkkkkkiii
k*YFLKNKMKLNNILLFLSFVLITINQISKTQAVQCVDYNNPNYYKFINPLMNNXAYCYI
KPTNASEISDAILYAQSINKGVSIKSGGHSATQFSMLNKTVN---

---NTIXMLNKTVNIDLSSLKGIEIDVEAQTVVVQAGVQVIELYNATTKLLLATTAGSCP
TVGMGVVLGGGSNYFGGKYGYMADNILEFTVVLEDGSIVKANPKNKYSDLYWALAGSGGG
GFGVVVDYKIKVYPIPQYFYKNTIRFDIVNLDKALALLDSYVRSATEQTRENIYANMYSQ
LTLKSANMTPSASITFFYNGPLEEGDFEFRKLLTGFLCPPSNPTCTPLGKVTTMDIQTLK
KTFWEVISSMSYDNNPLRQFTKGRFVKKLSKNDVPKAINDFYKYAVTNIINSTSLVKPET
LLNINQAIFYHGGKQNQDRTGSIDSPFNSFLHRGDEAMWSYTIVAQYNNTENDPLFSGLR
KLVNSKLSSIGDKLNNNYPDDEFEDWQTGLYVTKSNYKKLQEIKGKYDPNNYFNYPQSIE
LPKK*inliiklnn*

Homology Contig-U09703-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U09703-1 (Contig-U09703-1Q) /CSM_Contig/Conti...  2845  0.0
Contig-U03183-1 (Contig-U03183-1Q) /CSM_Contig/Conti...    48  3e-05
Contig-U12693-1 (Contig-U12693-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U11472-1 (Contig-U11472-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U11569-1 (Contig-U11569-1Q) /CSM_Contig/Conti...    38  0.032
Contig-U10723-1 (Contig-U10723-1Q) /CSM_Contig/Conti...    38  0.032
Contig-U09385-1 (Contig-U09385-1Q) /CSM_Contig/Conti...    38  0.032
Contig-U14702-1 (Contig-U14702-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U14149-1 (Contig-U14149-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U12785-1 (Contig-U12785-1Q) /CSM_Contig/Conti...    36  0.13

Homology Contig-U09703-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ432811) Dictyostelium discoideum cDNA clone:ddv19m22, 3' ...  1308   0.0    1
(BJ413338) Dictyostelium discoideum cDNA clone:ddv15k03, 5' ...  1181   0.0    1
(BJ414634) Dictyostelium discoideum cDNA clone:ddv19m22, 5' ...  1162   0.0    1
(AU262771) Dictyostelium discoideum vegetative cDNA clone:VS...   965   0.0    1
(BJ433547) Dictyostelium discoideum cDNA clone:ddv22a07, 3' ...   906   0.0    1
(BJ431693) Dictyostelium discoideum cDNA clone:ddv15k03, 3' ...   757   0.0    1
(BJ435155) Dictyostelium discoideum cDNA clone:ddv26c08, 3' ...   658   0.0    2
(BJ432457) Dictyostelium discoideum cDNA clone:ddv18b20, 3' ...   293   1e-74  1
(AC107106) Rattus norvegicus clone CH230-155M2, WORKING DRAF...    52   0.080  1
(BU434958) 603219688F1 CSEQRBN10 Gallus gallus cDNA clone Ch...    52   0.080  1

Homology Contig-U09703-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP000817_2877(CP000817|pid:none) Lysinibacillus sphaericus C3-41...    62   2e-10
CP000728_267(CP000728|pid:none) Clostridium botulinum F str. Lan...    64   2e-10
CU207366_170(CU207366|pid:none) Gramella forsetii KT0803 complet...    60   3e-10
CP000962_932(CP000962|pid:none) Clostridium botulinum A3 str. Lo...    55   2e-09
CP000939_292(CP000939|pid:none) Clostridium botulinum B1 str. Ok...    59   3e-09
CP001056_2300(CP001056|pid:none) Clostridium botulinum B str. Ek...    57   1e-08
BA000030_4088(BA000030|pid:none) Streptomyces avermitilis MA-468...    59   4e-07
AC007060_16(AC007060|pid:none) Arabidopsis thaliana chromosome 1...    57   3e-06
CP000090_1621(CP000090|pid:none) Ralstonia eutropha JMP134 chrom...    55   6e-06
CP001083_267(CP001083|pid:none) Clostridium botulinum Ba4 str. 6...    45   1e-05