Dictyostelium discoideum cDNA Contig-U09625-1

Assembled

Chromosomal Location of Contig-U09625-1

Sequence Contig-U09625-1

ACTGTTGGCC TACTGGTATT GTGAAATTTA AAAAGAAAAA ACAATAACAA
TGATCACAAG AGGTGTTATT AAAAATATTA AAACCACATC AGTTTTAATT
AATAATTCAA TTAAATCAAC TCAATGTAGT TTTTCATCAA AAGTTAATTA
TGATGAAATT TATAAAAAAC ATTTAAAAAT TTCAGAAAAA AAATTTAATA
AAAAAGAAAT TATTCAAACA ATTAAAGATA ATACATTATT TTCATGGAAT
CCAACAGAAG CAGCAGCAAA TAAAGCATTA ATTATGGAAA AAGGTGAAGG
TGTTTATTTT TATGATACAG ATGGTAAGAA ATATATTGAT TTCAATTCAC
AAGCAATGTG TTCAAATCTT GGACATACAG TACCAGAGGA AGTTATTAAA
GCAATTGAAG AACAATTGAG ATCAGCTGCT TATGCTTATC CATGTTCAAT
TGTAACACCA ATTAAAGCAA AGTTATCAAT GTTATTAGCA GATTTATTCC
CAGGTGATAT CAACCATTTC TACTACACAA GTGGTGGTGC AGAGTCAAAT
GAAACCGCAA TGAGAATGGC ACGTCTTTTC ACTGGTCGTC AT--------
--GAGGTAAT TCCAGATATC GTCACAATGG CAAAAGGTAT CAATGGTGCC
TACCTCCCAT TGGGTGCTGT TGGCTGTCGT GATCGTATTG CTGACCACTT
TAAAGTCAAC CCAATTGGCA TTGGCTCAAC TTACAATAGT CATCCAGTCA
CATTAGCATC AGCATATGCC GCATTACAAT ATTTNTTAAA NAATCGTGTA
TTGGATAATG TTAAAACTTT AGAACCAGTA ATGAAAAAAC ATATGGAACA
ATTGAAACAA CGTCATCCAA CAGTCAAAGG TTACCGTTCA TTAGGTTTAT
TCGGTATCGT TGAACTTCAA AAGAATTCAA ATGGTGACCC ATTCATCGAA
NACAATGGTC CACCACACCC AGCCATGACT AAACTATCCT CAGATTTCGT
TGAAAATGGT TTATACACAC TTTGCCGTTG GTCATCCTTC TTTACAAATC
CACCATTAAC AATTAATGAA AAAGAATTAA AAGAAGGTTT TGAAATTTTA
GATAAATCTT TAACAAATTT AGATAAACAT TTTTAAAAAT AAATCAATAA
AATAAAAAAA AAAACATATA ATAAATTTAT ATTTTTATNA ATGTNATTCA
ATTA

Translated Amino Acid Sequence Contig-U09625-1

llaywycei*KEKTITMITRGVIKNIKTTSVLINNSIKSTQCSFSSKVNYDEIYKKHLKI
SEKKFNKKEIIQTIKDNTLFSWNPTEAAANKALIMEKGEGVYFYDTDGKKYIDFNSQAMC
SNLGHTVPEEVIKAIEEQLRSAAYAYPCSIVTPIKAKLSMLLADLFPGDINHFYYTSGGA
ESNETAMRMARLFTGRH---

---EVIPDIVTMAKGINGAYLPLGAVGCRDRIADHFKVNPIGIGSTYNSHPVTLASAYAA
LQYXLXNRVLDNVKTLEPVMKKHMEQLKQRHPTVKGYRSLGLFGIVELQKNSNGDPFIEX
NGPPHPAMTKLSSDFVENGLYTLCRWSSFFTNPPLTINEKELKEGFEILDKSLTNLDKHF
*k*inkikkktynkfiflxmxfn

Homology Contig-U09625-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U09625-1 (Contig-U09625-1Q) /CSM_Contig/Conti...  1818  0.0
Contig-U11659-1 (Contig-U11659-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U09392-1 (Contig-U09392-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U14248-1 (Contig-U14248-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U14143-1 (Contig-U14143-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U13873-1 (Contig-U13873-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U12733-1 (Contig-U12733-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U14126-1 (Contig-U14126-1Q) /CSM_Contig/Conti...    34  0.34
Contig-U13297-1 (Contig-U13297-1Q) /CSM_Contig/Conti...    34  0.34
Contig-U13255-1 (Contig-U13255-1Q) /CSM_Contig/Conti...    34  0.34

Homology Contig-U09625-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ432299) Dictyostelium discoideum cDNA clone:ddv18d12, 3' ...   906   0.0    1
(AU263906) Dictyostelium discoideum vegetative cDNA clone:VS...   726   0.0    2
(AU263907) Dictyostelium discoideum vegetative cDNA clone:VS...   862   0.0    2
(BJ413118) Dictyostelium discoideum cDNA clone:ddv14b07, 5' ...   359   e-174  3
(BJ431458) Dictyostelium discoideum cDNA clone:ddv14b07, 3' ...   575   e-171  2
(BJ414168) Dictyostelium discoideum cDNA clone:ddv18d12, 5' ...   345   e-150  3
(GR585516) CCAA610.b1 CCAA Dictyostelium purpureum 0 hr star...   371   4e-98  1
(GR585518) CCAA611.g1 CCAA Dictyostelium purpureum 0 hr star...    90   9e-56  4
(GR585517) CCAA610.g1 CCAA Dictyostelium purpureum 0 hr star...    90   2e-55  4
(AP010784) Solanum lycopersicum DNA, chromosome 8, clone: C0...    42   0.035  2

Homology Contig-U09625-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP000850_2850(CP000850|pid:none) Salinispora arenicola CNS-205, ...    99   2e-19
BA000023_1206(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,...    94   1e-17
AP009152_2328(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ...    94   1e-17
CP000431_4419(CP000431|pid:none) Rhodococcus jostii RHA1, comple...    92   3e-17
CP001400_2413(CP001400|pid:none) Sulfolobus islandicus M.14.25, ...    91   8e-17
CP001403_2693(CP001403|pid:none) Sulfolobus islandicus Y.G.57.14...    91   1e-16
CP001399_2537(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,...    91   1e-16
CP001620_204(CP001620|pid:none) Corynebacterium kroppenstedtii D...    90   2e-16
CP000378_1420(CP000378|pid:none) Burkholderia cenocepacia AU 105...    89   2e-16
CP001140_124(CP001140|pid:none) Desulfurococcus kamchatkensis 12...    89   2e-16