<Clone: Contig-U09614-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U09614-1

Dictyostelium discoideum cDNA Project Home

Assembled

Chromosomal Location of Contig-U09614-1

< more Chromosomal info >

Chromosome Number 2
Length 8467578
Start Poin 3,900,987
End Point 3,899,928
Strand MINUS

Sequence Contig-U09614-1

ATTTTTTTAT TATTTTTTTT TTAATTAATT CCAAGACAAC CAAAATAAAA
AACAAATAAA ATGGTATCAG ATAATCCACT CCAACAAGTC CGTGAATCAG
CAAATTGGGT TAACGAACAT TCAGATAATG TTAAAATCAA CTTTAATAAA
ATCAATGAAT TTTTAGATAA TCTTAAAAAA GATGATTATG AATCAAAATC
ATCAACAGTT TTATTTCCAT TAAATTATTC AAATTCACAA CAAGAAATTA
ATTTTTGGTT TTTATTAGAT TTAATTAATT TTGGAAGTGG ATATAGAAAA
GAGTTACATG AAGCATGTAA TAGAGGTGCA TATGAAACTA TTTGTTATGG
ATTGATGGGT ATGTTTTTAT CACAGGGTGG GAAATTAACA GCCAATTTCC
TTAGTAATAT GTCATTGAAT GATGTTTCAC AACTATTTAA TATACCAACA
CAAGAGGAAT TTGAAATTCA AGCTGGAATT TACTCATATC GTGATACACC
ATTAAAACAA TTGGCTCAAT CAATTCATAC AGTTTTAAAA GAAAGTTCAG
AGATTGTTTT AAAATTAGGA TTTCAAGATT TTGGTGATTG GATTTGGAGT
ATTACAGATC CATCTAAAAG ATCATCATCA TCATCATCAA CAACTCCATT
GGCATCAGA- ---------C ATCAACAACT CCATTGGNAT CANATTTAGT
TAAAATTTTA GTTNAAACAA TTCCAGCATT CAATGATCAA GCNAACTATA
AAGGTCATCG GATTTTCATT TTTAAAAAAG TTCNATTATT AGCAGCAGAT
NTTTATNGTN GTTTCAAAAA AACCNAACCT GATCGTTTTA ATTTCCCTGA
NATTAANGAT GNTACCGTTT TCCCTGANAA TGTTTTACCN GCTGTTTTAA
AAAATTTTGG AATTTTANAA GTTTCNAAAN AATTAAAANA ACGNTTAAAN
GCTGGNGCTG AATTATTACC NGGAAATGAT GAGGTTGAAN TAAGGGNTCN
AGCNANTCAA GCATGNATTG AAATCGTTTC NATTGCAAAN AAAANAACTG
ATAATTTTAT TAAAAA

Translated Amino Acid Sequence Contig-U09614-1

<All Frames> 
ifllfff*liprqpk*KTNKMVSDNPLQQVRESANWVNEHSDNVKINFNKINEFLDNLKK
DDYESKSSTVLFPLNYSNSQQEINFWFLLDLINFGSGYRKELHEACNRGAYETICYGLMG
MFLSQGGKLTANFLSNMSLNDVSQLFNIPTQEEFEIQAGIYSYRDTPLKQLAQSIHTVLK
ESSEIVLKLGFQDFGDWIWSITDPSKRSSSSSSTTPLAS---

---STTPLXSXLVKILVXTIPAFNDQANYKGHRIFIFKKVXLLAADXYXXFKKTXPDRFN
FPXIXDXTVFPXNVLPAVLKNFGILXVSKXLKXRLXAGAELLPGNDEVEXRXXAXQAXIE
IVSIAXKXTDNFIK


Homology Contig-U09614-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U09614-1 (Contig-U09614-1Q) /CSM_Contig/Conti...  1108  0.0
Contig-U02455-1 (Contig-U02455-1Q) /CSM_Contig/Conti...    38  0.019
Contig-U01890-1 (Contig-U01890-1Q) /CSM_Contig/Conti...    38  0.019
Contig-U08850-1 (Contig-U08850-1Q) /CSM_Contig/Conti...    36  0.075
Contig-U08778-1 (Contig-U08778-1Q) /CSM_Contig/Conti...    36  0.075
Contig-U14862-1 (Contig-U14862-1Q) /CSM_Contig/Conti...    34  0.30
Contig-U14685-1 (Contig-U14685-1Q) /CSM_Contig/Conti...    34  0.30
Contig-U13498-1 (Contig-U13498-1Q) /CSM_Contig/Conti...    34  0.30
Contig-U13223-1 (Contig-U13223-1Q) /CSM_Contig/Conti...    34  0.30
Contig-U12686-1 (Contig-U12686-1Q) /CSM_Contig/Conti...    34  0.30


Homology Contig-U09614-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(BJ413580) Dictyostelium discoideum cDNA clone:ddv16c12, 5' ...   670   0.0    3
(BJ412983) Dictyostelium discoideum cDNA clone:ddv13o18, 5' ...   603   0.0    3
(BJ431310) Dictyostelium discoideum cDNA clone:ddv13o18, 3' ...   327   e-149  2
(BJ434232) Dictyostelium discoideum cDNA clone:ddv16c12, 3' ...   159   4e-68  2
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp...    34   0.48   13
(AF222894) Ureaplasma parvum serovar 3 str. ATCC 700970, com...    34   0.48   13
(CU929650) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   0.73   1
(DE194103) Branchiostoma floridae DNA, clone: CH302-075_H05_...    48   0.73   1
(CL128891) ISB1-95G24_Sp6.1 ISB1 Xenopus (Silurana) tropical...    48   0.73   1
(EJ574837) 1092960089204 Global-Ocean-Sampling_GS-29-01-01-1...    36   2.0    2


Homology Contig-U09614-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


AK103183_1(AK103183|pid:none) Oryza sativa Japonica Group cDNA c...    68   6e-10
EU962308_1(EU962308|pid:none) Zea mays clone 241690 hypothetical...    67   1e-09
AM431372_4(AM431372|pid:none) Vitis vinifera contig VV78X230175....    66   2e-09
EF677858_1(EF677858|pid:none) Picea sitchensis clone WS02776_H19...    60   1e-07
AF045640_3(AF045640|pid:none) Caenorhabditis elegans cosmid C11D...    50   1e-04
BT052600_1(BT052600|pid:none) Medicago truncatula clone MTYFD_FE...    49   2e-04
CP000478_312(CP000478|pid:none) Syntrophobacter fumaroxidans MPO...    49   4e-04
(A7SNN9) RecName: Full=UPF0553 protein v1g230591;                      45   0.004
CR954201_252(CR954201|pid:none) Ostreococcus tauri strain OTTH05...    44   0.007
AM270220_4(AM270220|pid:none) Aspergillus niger contig An11c0030...    42   0.028


<Clone: Contig-U09614-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Project Home