Dictyostelium discoideum cDNA Contig-U09610-1

Assembled

Chromosomal Location of Contig-U09610-1

Sequence Contig-U09610-1

TATAGCAGCA ACAACAACAT CACCACTGCC ACCAACTATA AAAACAACAA
CACCATCACT ACCACCACCA ATTATAGCAA CAACAAAAAC AACATCACCA
CCAGCTATAA CAACAACATC ACCACCACCA CCAATTATAA CAACAACACC
ATCACTACCA CCACCAATTA TAAAAACAAC ACCACCACCA ATTATAAAAA
CAACAACAAC AACAACAACA ATAACAACAA CACCACCACC ACCAATTATA
ACAACAAAAA CAACATCACC ACCAATTTTA ACAACAACAA CATCACCACT
AACACCAATT ATTCAAACAA TACAACCACA AAAGAAAAAC ACCACTATAA
ATGCACCAAT TTTTAAAACC ACCTCACCCC CAACCATAAC AACAACAACC
ACAAAAACAA TTTTACCACC GTCACCAACA ATAACAGCAG CAACAACAAC
TATAACATCA CCACAACAAC AAATATCAAT TTTAGAAAAT GATACTACAA
AAGATATTTT AATGAAGGAT AATGATAAAA GTGAAAAAGA ATCTGATGAA
GAAAGCGATG ATTCGGATTC AGAGTCTGAA CCAGA----- -----AAAGG
NAAAAAGAAA ANATTAGAAA AAGAGGAGGT TAGAAAAAAG AAAAGTTAGG
AAAAAGAAAA GTTAGAGAGA GAAAAGGTTA CAAAAGGAAA AAGAAAGAAT
TGAAAANGAA AGTTTTAAAA AGAAAGATTA CAAAAAGAAA GATTAGAGAA
AGAAAGATTA GAAAAAGAAA GATTAGAAAA AGAAAGATTA GAGAGAGAAA
GGTTTCAAAA AGAAAAAGAA AAGTTGGAAA AAGACCAACA AAAAGAAAGA
TTAGAAAAAG AAAAATTAGA TAAAGAGAGA TTGGAAAAAG AAAAGCTAGA
ACAACAAAAA GAAAAAGAAA GATTGATTGA AAAAGAGAGA GATATTGAAA
AAGAAAGAGA TATTGAAATT CAAAAACAAT TAGAGAATGA AAAACAAAAG
GAAAAAGAGG AATTGAAAAA GAAAGATTTG AAAAAGAAAG ATTAGAAAAA
GAAAGATTAG AAAAAGAAAG ATTAGAAAAA GAAAGATTAG AAAAAGAAAG
NATTAGAAAA AGAAAGGTTA GAGAGAGAAA GATCACAAAG GNAAAAAGNA
AAATTNNAAA

Translated Amino Acid Sequence Contig-U09610-1

IAATTTSPLPPTIKTTTPSLPPPIIATTKTTSPPAITTTSPPPPIITTTPSLPPPIIKTT
PPPIIKTTTTTTTITTTPPPPIITTKTTSPPILTTTTSPLTPIIQTIQPQKKNTTINAPI
FKTTSPPTITTTTTKTILPPSPTITAATTTITSPQQQISILENDTTKDILMKDNDKSEKE
SDEESDDSDSESEP---

---KGKKKXLEKEEVRKKKS*ekeklerekvtkgkrkn*kxkf*kerlqkerlekerlek
erlekerlererfqkekeklekdqqkerlekekldkerlekekleqqkekerliekerdi
ekerdieiqkqlenekqkekeelkkkdlkkkd*kkkd*kkkd*kkkd*kkkxlekerler
ersqrxkxkxx

Homology Contig-U09610-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U09610-1 (Contig-U09610-1Q) /CSM_Contig/Conti...   272  8e-73
Contig-U01210-1 (Contig-U01210-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U12952-1 (Contig-U12952-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U13396-1 (Contig-U13396-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U12283-1 (Contig-U12283-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U12014-1 (Contig-U12014-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U01374-1 (Contig-U01374-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U14250-1 (Contig-U14250-1Q) /CSM_Contig/Conti...    38  0.021
Contig-U13650-1 (Contig-U13650-1Q) /CSM_Contig/Conti...    38  0.021
Contig-U12810-1 (Contig-U12810-1Q) /CSM_Contig/Conti...    38  0.021

Homology Contig-U09610-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ412922) Dictyostelium discoideum cDNA clone:ddv13m07, 5' ...   224   1e-58  2
(CU550682) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   3.2    1
(DY845632) CcinSEQ6262 Coprinus cinereus pBluescript (EcoRI-...    46   3.2    1
(CP001656) Paenibacillus sp. JDR-2, complete genome.               46   3.2    1

Homology Contig-U09610-1 vs Protein