Dictyostelium discoideum cDNA Contig-U09597-1

Assembled

Chromosomal Location of Contig-U09597-1

Sequence Contig-U09597-1

AATAATAATA AAACTGATTA GATTTAACAA TGGCAGAAGT TAGTTTTAAA
GAAAGTGATA TTTTAAAAAA ATATAAAGAA ACCCATAAAG CAGGCTATGA
TGAAATAATT GAAAAACCAA AAGCAGTTGT TTTTTTTGAC TTTATTAAAG
ATTTTGGTGT TATAGTTGGT GGAATTATTG GTTCAATCCC AATTATTGGT
TCAGGAGCTA GTGCAGTTTT TAATGTTTTG TATGATCATT TTGCTGTAGA
CCCAAGTTCT GGAGAGGTAA TTAGATTTGT TACACCTGAA GAATTTGAAA
GTAGACTAAA CTCTTTTCGT CGTCAAATGG AAGATTTTGT AAATCAAAAG
TTGGATCAAA CATATGTTAG TATAGCAAAT TCACACCATA GAGCATTACA
AAAAATTTTA AATCGTTACC ATGAATTAAT TGTTACTTTT GAAAATAATT
TTGGTGTTCC AATTTCAAGT TTAGGACAGT ATGGTATTAA TGTTAAAAAT
TATAAAAATT T--------- -TCAAAGTAT GATAATTTCC CACTTTATCT
AGTTAATNAT GGTGTTCTTG ACATGAGATT ACCTCCATAT GAAATTGATC
ATCCTGCAGA AAATCTTGGC TTTGCCGTAT ATGATTTTAT CAATGATGGT
GTATTATGGT TAAATTTTTC ATTGTTATTA GACTTTGGAT ACAAAGTTTC
AAGACCAACA CGTTCATTTA AAAAAGTTAC AATGGAAATT AGAATAAATG
ATTACGAAAA TCCTAATGAT TTTAGTGTTA CTGTTGACTC AACTACAAAA
GCAAGCAAAG ATATGGAAAA ATTAACTTTT AGATCTTTTG CCCAGTACAG
ACTTTTTGTC GAACAAGATT TTGGTAGGGT TTACAAATGC ACATTTGATT
TTTCACAAGA GAAAACAAGT TTTGATGTAA GTTTCCAATC ACTTGAACCA
TATATGAATC AACTTAATTG TGTTCACTAT AGATTAGAAT AGAAAATGAA
AAAATTTCCA ATTTATATTT TTTAGATTTT ACTCTTTTTT TTTTAAAAAA
ATAAAATTCA ATTACACCAC CACCACCACT NCCACTGTCA CCA

Translated Amino Acid Sequence Contig-U09597-1

***n*LDLTMAEVSFKESDILKKYKETHKAGYDEIIEKPKAVVFFDFIKDFGVIVGGIIG
SIPIIGSGASAVFNVLYDHFAVDPSSGEVIRFVTPEEFESRLNSFRRQMEDFVNQKLDQT
YVSIANSHHRALQKILNRYHELIVTFENNFGVPISSLGQYGINVKNYKN---

---SKYDNFPLYLVNXGVLDMRLPPYEIDHPAENLGFAVYDFINDGVLWLNFSLLLDFGY
KVSRPTRSFKKVTMEIRINDYENPNDFSVTVDSTTKASKDMEKLTFRSFAQYRLFVEQDF
GRVYKCTFDFSQEKTSFDVSFQSLEPYMNQLNCVHYRLE*kmkkfpiyif*illfff*kn
kiqlhhhhhxhch

Homology Contig-U09597-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U09597-1 (Contig-U09597-1Q) /CSM_Contig/Conti...  1895  0.0
Contig-U11181-1 (Contig-U11181-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U14272-1 (Contig-U14272-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U13582-1 (Contig-U13582-1Q) /CSM_Contig/Conti...    38  0.020
Contig-U13420-1 (Contig-U13420-1Q) /CSM_Contig/Conti...    38  0.020
Contig-U11661-1 (Contig-U11661-1Q) /CSM_Contig/Conti...    38  0.020
Contig-U11135-1 (Contig-U11135-1Q) /CSM_Contig/Conti...    38  0.020
Contig-U01028-1 (Contig-U01028-1Q) /CSM_Contig/Conti...    38  0.020
Contig-U14187-1 (Contig-U14187-1Q) /CSM_Contig/Conti...    36  0.077
Contig-U14041-1 (Contig-U14041-1Q) /CSM_Contig/Conti...    36  0.077

Homology Contig-U09597-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ427916) Dictyostelium discoideum cDNA clone:ddv10d05, 3' ...   965   0.0    2
(BJ409792) Dictyostelium discoideum cDNA clone:ddv10d05, 5' ...   741   0.0    3
(AC207211) Pongo abelii chromosome UNKNOWN clone CH276-404G1...    38   0.016  8
(CU019613) Mouse DNA sequence from clone bMQ-_389E17 on chro...    52   0.048  1
(AC126598) Mus musculus chromosome 5, clone RP24-486L9, comp...    52   0.048  1
(U02300) Pennisetum glaucum activator (Ac)-like element Pac1...    52   0.048  1
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi...    34   0.11   17
(EK581626) 1095521702434 Global-Ocean-Sampling_GS-32-01-01-1...    40   0.12   3
(CU682361) Zebrafish DNA sequence from clone CH1073-475E17.        40   0.16   3
(U64599) Caenorhabditis elegans cosmid F56B6, complete seque...    36   0.19   5

Homology Contig-U09597-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


EF486523_1(EF486523|pid:none) Bacillus thuringiensis strain BTH-...    35   3.5
EU124375_1(EU124375|pid:none) Bacillus thuringiensis strain DAB-...    35   4.6
(O25827) RecName: Full=Aspartokinase;          EC=2.7.2.4; AltNa...    35   4.6
CP001217_1188(CP001217|pid:none) Helicobacter pylori P12, comple...    35   4.6
CP001072_1204(CP001072|pid:none) Helicobacter pylori Shi470, com...    35   4.6
CU207366_2023(CU207366|pid:none) Gramella forsetii KT0803 comple...    34   7.8