Dictyostelium discoideum cDNA Contig-U09571-1

Assembled

Chromosomal Location of Contig-U09571-1

Sequence Contig-U09571-1

ATTCATTTTT TTTTATTTTT TTTTTATTCC ACACCACTTT TATATATCTT
ATCAAAAAAA AAAAAATTAA AAAATTAAAA AGGTAAAAAA CCAACCAAAN
CAACCAAAAN AAAA------ ----TGGCCT ACTGGAAAAA AAATAAAAAA
GTAAAAAAAC AAACAAAACA AACAAAATAA AAAAAAAGTT ACATTCCTCC
CTCCTCCTTC CTCTTCCCAA TCCAACCTAT TCACATACCT ATACACATAT
TTTTTATATA TAAAAAAAAT TATGACATTA GTATCAAATA TTGTTGGTAT
TGTTGTACCA GTTGTTATTG CGCTGATAAT ACTTATAATT TTACTTAAAA
AGAGTTTATT AATATTAAAA GAAAGAGAAA TCATTATACT AGAACGTTTT
GGACAATATC ATAATATATT ACATGCTGGT GTACATTGGA CAATTCCATG
GGTTGATAGA CCAAAAACAT TTTATTATTC ATATTACGTT GATACACCAA
GTGGTAAAGA GTTAAGAGAA GGTTTAAATT TAACAAGAAT TTCAACTCAA
AATGAAGTTT TAGATTTACC AAAACAAACT GTTATTACAA GAGATTGTGC
ATCAGTTGAT TTAGATGCAG TTTTATCATA TAAAATTACA AATCCAAAAC
AAATGATTTA TAGTTGTGTA AATTTACCAA ATATCCTTTC AAAACTATTA
CAAGCTCAAT TAAGAAATTT AGCAGGTACA TTAGAGATTG ATCAAATCAT
TGAAGAATCA CACCTATTAA ATGCTCTCAC TGGTTTAATG GCAAGTGAAG
CAAATAAATG GGGTGTTGAA ATAGTGTTTG TTAAAGTTCA AAGAGTTGAA
GCAAGAAGAT TAGCTGAAGT TTTAGCTAAA AAGAAAAATG CTGATTTAAA
AAATAAAGAA ATTATTATTA CAGCAAAAGC ACATAAACAA ACTAAAGTAA
TTGAAAGTGA GGGTCTAAGA GATTCAATGA TAAAGAAAGC AGAAGGTGAA
GCACAAGAGA TTGTTTCAAG AGCAAAAGGT GCTGCTCAAG CAAAATTAAA
TTCTGCTCAA GCTGAAGTTA AAACTATTAA AGAGATTGCA AGAGCTGTTG
GTTTAAATAA GGATTCAAAA GTTGATGTTT CAAAATATAT TATCACTATT
AAATATTTAA ATGCACTTAA ACAAATTTTA AGTTTATCTC AAACTTCTAC
AAATTTAATT GCTGAAGAAA CTGTTGACCT TCAATCATTA CCAATGTTTG
GTGTTTCTTC TGTAGCATTA CCAAATTTAA GTGTTAAAAA AAATAATTAA
TAATAATAAT AAATAATAAA TAATAATAAA CATATTGTTT AAATTTGTAA
AATAGTAAAA AAAAAAAAAA AAAA

Translated Amino Acid Sequence Contig-U09571-1

fiffyfffiphhfyisyqkkkn*KIKKVKNQPXQPKX---

---AYWKKNKKVKKQTKQTK*kksyippssflfpiqpihipihiffiykknydisikycw
ycctscycadntynft*kefinikrkrnhytrtfwtis*yitcwctldnsmg**tknill
filr*ytkw*rvkrrfkfnknfnsk*sfrftktncyykrlcis*frcsfii*nyksktnd
l*lckftkypfktitssikkfsryird*snh*ritpikcshwfngk*sk*mgc*nsvc*s
sks*skkis*sfs*kekc*fkk*rnyyyskst*tn*sn*k*gskrfndkesrr*strdcf
kskrccsskikfcss*s*ny*rdckscwfk*gfks*cfkiyyhy*ifkct*tnfkfisnf
ykfnc*rnc*psiitnvwcffcsitkfkc*kk*liiiinnk***tyclnl*nskkkkkk

Homology Contig-U09571-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U09571-1 (Contig-U09571-1Q) /CSM_Contig/Conti...  1318  0.0
Contig-U11472-1 (Contig-U11472-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U11930-1 (Contig-U11930-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U08768-1 (Contig-U08768-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U08753-1 (Contig-U08753-1Q) /CSM_Contig/Conti...    38  0.025
Contig-U03115-1 (Contig-U03115-1Q) /CSM_Contig/Conti...    38  0.025
Contig-U14031-1 (Contig-U14031-1Q) /CSM_Contig/Conti...    36  0.097
Contig-U13854-1 (Contig-U13854-1Q) /CSM_Contig/Conti...    36  0.097
Contig-U12341-1 (Contig-U12341-1Q) /CSM_Contig/Conti...    36  0.097
Contig-U12047-1 (Contig-U12047-1Q) /CSM_Contig/Conti...    36  0.097

Homology Contig-U09571-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ390568) Dictyostelium discoideum cDNA clone:dds22l21, 5' ...  1019   0.0    2
(BJ430110) Dictyostelium discoideum cDNA clone:ddv6j03, 3' e...   670   0.0    2
(BJ346164) Dictyostelium discoideum cDNA clone:dda30f02, 3' ...   670   0.0    2
(BJ401327) Dictyostelium discoideum cDNA clone:dds22l21, 3' ...   646   0.0    2
(BJ415683) Dictyostelium discoideum cDNA clone:ddv23i12, 5' ...   955   0.0    2
(BJ433928) Dictyostelium discoideum cDNA clone:ddv23i12, 3' ...   670   0.0    2
(BJ329880) Dictyostelium discoideum cDNA clone:dda26j13, 5' ...   783   0.0    2
(AU037202) Dictyostelium discoideum slug cDNA, clone SSB605.      571   e-158  1
(BJ429452) Dictyostelium discoideum cDNA clone:ddv3d15, 3' e...   311   e-137  2
(AM805616) Nicotiana tabacum EST, clone nt005001007.               44   8e-07  4

Homology Contig-U09571-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP001055_350(CP001055|pid:none) Elusimicrobium minutum Pei191, c...   149   2e-34
AE015924_1144(AE015924|pid:none) Porphyromonas gingivalis W83, c...   147   9e-34
CU466930_1580(CU466930|pid:none) Candidatus Cloacamonas acidamin...   140   1e-31
CP000969_61(CP000969|pid:none) Thermotoga sp. RQ2, complete geno...   119   3e-25
CP000702_61(CP000702|pid:none) Thermotoga petrophila RKU-1, comp...   117   1e-24
CP000916_1709(CP000916|pid:none) Thermotoga neapolitana DSM 4359...   117   1e-24
(O26788) RecName: Full=Uncharacterized protein MTH_692;  &AE0006...   112   2e-23
AE016827_834(AE016827|pid:none) Mannheimia succiniciproducens MB...   110   9e-23
CP001185_1641(CP001185|pid:none) Thermosipho africanus TCF52B, c...   109   3e-22
BX950851_1182(BX950851|pid:none) Erwinia carotovora subsp. atros...   109   3e-22