Homology Contig-U09571-1 vs DNA
Query= Contig-U09571-1 (Contig-U09571-1Q) /CSM_Contig/Contig-U09571-1Q.Seq.d
(1374 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ390568) Dictyostelium discoideum cDNA clone:dds22l21, 5' ... 1019 0.0 2
(BJ430110) Dictyostelium discoideum cDNA clone:ddv6j03, 3' e... 670 0.0 2
(BJ346164) Dictyostelium discoideum cDNA clone:dda30f02, 3' ... 670 0.0 2
(BJ401327) Dictyostelium discoideum cDNA clone:dds22l21, 3' ... 646 0.0 2
(BJ415683) Dictyostelium discoideum cDNA clone:ddv23i12, 5' ... 955 0.0 2
(BJ433928) Dictyostelium discoideum cDNA clone:ddv23i12, 3' ... 670 0.0 2
(BJ329880) Dictyostelium discoideum cDNA clone:dda26j13, 5' ... 783 0.0 2
(AU037202) Dictyostelium discoideum slug cDNA, clone SSB605. 571 e-158 1
(BJ429452) Dictyostelium discoideum cDNA clone:ddv3d15, 3' e... 311 e-137 2
(AM805616) Nicotiana tabacum EST, clone nt005001007. 44 8e-07 4
(ET877541) CHO_OF095xm18r1.ab1 CHO_OF Nicotiana tabacum geno... 56 0.004 1
(ET877477) CHO_OF095xm18f1.ab1 CHO_OF Nicotiana tabacum geno... 56 0.004 1
(BJ411865) Dictyostelium discoideum cDNA clone:ddv6j03, 5' e... 56 0.004 1
(AL844506) Plasmodium falciparum 3D7 chromosome 7. 36 0.097 15
(FP340663) Brassica rapa subsp. pekinensis clone KBrH118C16,... 50 0.24 1
(FP340635) Brassica rapa subsp. pekinensis clone KBrH032I18,... 50 0.24 1
(DU099208) JBnY032G17F Brassica napus BAC library JBnY Brass... 50 0.24 1
(CE759264) tigr-gss-dog-17000369698402 Dog Library Canis lup... 50 0.24 1
(EH665394) 21G05 Transformed tobacco Lambda Zap II library N... 50 0.24 1
(CJ357459) Molgula tectiformis cDNA, cleaving embryo clone:m... 40 0.26 2
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699... 32 0.29 16
(AE014187) Plasmodium falciparum 3D7 chromosome 14, complete... 40 0.30 16
(AC220282) Bos taurus clone CH240-368G3, WORKING DRAFT SEQUE... 40 0.42 7
(AC064864) Homo sapiens BAC clone RP11-407M6 from 2, complet... 38 0.60 6
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 40 0.64 20
(CP000727) Clostridium botulinum A str. Hall, complete genome. 38 0.66 17
(AQ601035) HS_5375_B2_A03_T7A RPCI-11 Human Male BAC Library... 34 0.69 2
(CP000726) Clostridium botulinum A str. ATCC 19397, complete... 38 0.87 17
(CP000716) Thermosipho melanesiensis BI429, complete genome. 42 0.93 21
(FM992691) Candida dubliniensis CD36 chromosome 4, complete ... 48 0.95 1
(AC136124) Rattus norvegicus clone CH230-257B2, WORKING DRAF... 48 0.95 1
(AC134702) Rattus norvegicus clone CH230-174M10, WORKING DRA... 48 0.95 1
(AC126971) Rattus norvegicus clone CH230-17G21, WORKING DRAF... 48 0.95 1
(AC106687) Rattus norvegicus clone CH230-61E13, WORKING DRAF... 48 0.95 1
(AC105681) Rattus norvegicus clone CH230-268I12, *** SEQUENC... 48 0.95 1
(AC220367) Bos taurus clone CH240-360O2, WORKING DRAFT SEQUE... 48 0.95 1
(BH149645) ENTQA72TR Entamoeba histolytica Sheared DNA Entam... 48 0.95 1
(DV794485) Hw_loin_7_050812_H05 Bos taurus CF-24-HW loin cDN... 48 0.95 1
(AJ672839) Bos taurus EST, clone KN224-010_F13. 48 0.95 1
(BB977839) Plasmodium berghei str. ANKA cDNA clone: OK007831... 48 0.95 1
(FC293363) CAGN7062.rev CAGN Nematostella vectensis Nemve mi... 48 0.95 1
(BH985107) oei04h03.g1 B.oleracea002 Brassica oleracea genom... 42 0.99 2
(AC235054) Glycine max strain Williams 82 clone GM_WBb0150D1... 40 1.0 5
(CP001581) Clostridium botulinum A2 str. Kyoto, complete gen... 38 1.1 18
(AC149591) Mus musculus BAC clone RP23-332I9 from 18, comple... 40 1.3 7
(AX345794) Sequence 865 from Patent WO0200928. 40 1.3 4
(CZ031928) OM__Ba0008F07.r OM__Ba Oryza minuta genomic clone... 34 1.5 3
(CZ123671) OA_BBa0012B21.f OA_BBa Oryza alta genomic clone O... 34 1.5 3
(AR925831) Sequence 396 from patent US 7091315. 40 1.9 4
(AE017308) Mycoplasma mobile 163K complete genome. 34 2.0 17
(BX296552) Zebrafish DNA sequence from clone CH211-247P22. 36 2.1 9
(CP000825) Prochlorococcus marinus str. MIT 9215, complete g... 36 2.2 17
(CP001083) Clostridium botulinum Ba4 str. 657, complete genome. 34 2.7 20
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 38 2.7 11
(AC169664) Bos taurus clone CH240-208N7, WORKING DRAFT SEQUE... 36 2.8 7
(CS468878) Sequence 69 from Patent EP1748080. 36 3.3 12
(CS468877) Sequence 68 from Patent EP1748080. 36 3.3 12
(CS419355) Sequence 69 from Patent WO2006094836. 36 3.3 12
(CS419354) Sequence 68 from Patent WO2006094836. 36 3.3 12
(GS324730) LuSp057H03_1061063879939_TP POTATO-B-01-100-110KB... 44 3.7 2
(BN000945) TPA: Homo sapiens IL2RA gene for interleukin 2 re... 46 3.8 1
(BV431548) S237P6296RH4.T0 PortugueseWaterDog Canis familiar... 46 3.8 1
(AC140073) Mus musculus BAC clone RP23-282N20 from chromosom... 46 3.8 1
(AC132419) Mus musculus BAC clone RP23-252B17 from chromosom... 46 3.8 1
(AC122252) Mus musculus BAC clone RP23-170E7 from chromosome... 46 3.8 1
(AC109138) Mus musculus chromosome 19, clone RP23-41B18, com... 46 3.8 1
(BS000535) Pan troglodytes chromosome Y clone:PTB-096E06, co... 46 3.8 1
(AC146218) Pan troglodytes BAC clone CH251-267E2 from Y, com... 46 3.8 1
(AM480710) Vitis vinifera contig VV78X254681.3, whole genome... 46 3.8 1
(DL235578) NOVEL COMPOSITIONS AND METHODS FOR CANCER. 46 3.8 1
(DD159039) NOVEL COMPOSITIONS AND METHODS FOR CANCER. 46 3.8 1
(CS788804) Sequence 60 from Patent WO2005031001. 46 3.8 1
(AX695497) Sequence 1124 from Patent WO03008583. 46 3.8 1
(GN070568) Sequence 1124 from Patent EP2034030. 46 3.8 1
(AL157395) Human DNA sequence from clone RP11-414H17 on chro... 46 3.8 1
(AL035691) Human DNA sequence from clone RP1-249F5 on chromo... 46 3.8 1
(AC162155) Rhinolophus ferrumequinum clone VMRC7-270A17, WOR... 46 3.8 1
(AC156731) Bos taurus clone CH240-39O24, WORKING DRAFT SEQUE... 46 3.8 1
(AC156265) Takifugu rubripes, *** SEQUENCING IN PROGRESS ***... 46 3.8 1
(AC135217) Pan troglodytes clone RP43-141G8, WORKING DRAFT S... 46 3.8 1
(AC119541) Rattus norvegicus clone CH230-155L22, *** SEQUENC... 46 3.8 1
(AC103498) Rattus norvegicus clone CH230-31P10, *** SEQUENCI... 46 3.8 1
(CT797468) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.8 1
(AC230902) Bos taurus clone CH240-496K21, WORKING DRAFT SEQU... 46 3.8 1
(AC164192) Bos taurus clone CH240-150N8, *** SEQUENCING IN P... 46 3.8 1
(AZ610264) 1M0435O23F Mouse 10kb plasmid UUGC1M library Mus ... 46 3.8 1
(EJ669174) 1092955052049 Global-Ocean-Sampling_GS-30-02-01-1... 46 3.8 1
(ED044402) AUAC-aau16f12.b1 Ascaris suum whole genome shotgu... 46 3.8 1
(DH783418) Rattus norvegicus DNA, BAC clone: RNB1-372J05, 3'... 46 3.8 1
(CT545009) A BAC library has been constructed from cultivar ... 46 3.8 1
(BZ480189) BONQI08TR BO_1.6_2_KB_tot Brassica oleracea genom... 46 3.8 1
(AG124659) Pan troglodytes DNA, clone: PTB-134K22.F. 46 3.8 1
(DV392085) NADB895TF Aedes aegypti infected with Dengue viru... 46 3.8 1
(DV383806) NADAY77TR Aedes aegypti infected with Dengue viru... 46 3.8 1
(DV383804) NADAY77TF Aedes aegypti infected with Dengue viru... 46 3.8 1
(DB948397) Manihot esculenta mRNA, clone: CAS01_030_P14, 3'end. 46 3.8 1
(CO562749) AGENCOURT_28541563 NIH_MGC_249 Rattus norvegicus ... 46 3.8 1
(GE464189) 294758068 Nasonia vitripennis Adult Female Nasoni... 46 3.8 1
(GE463798) 294756725 Nasonia vitripennis Adult Female Nasoni... 46 3.8 1
(GE463153) 294755572 Nasonia vitripennis Adult Female Nasoni... 46 3.8 1
(GE461789) 294751408 Nasonia vitripennis Adult Female Nasoni... 46 3.8 1
(GE457967) 294609222 Nasonia vitripennis Adult Female Nasoni... 46 3.8 1
(GE457217) 294606118 Nasonia vitripennis Adult Female Nasoni... 46 3.8 1
(GE452002) 294589057 Nasonia vitripennis Adult Female Nasoni... 46 3.8 1
(GE450861) 294586892 Nasonia vitripennis Adult Female Nasoni... 46 3.8 1
(GE449398) 294584898 Nasonia vitripennis Adult Female Nasoni... 46 3.8 1
(GE447889) 294581826 Nasonia vitripennis Adult Female Nasoni... 46 3.8 1
(GE447529) 294580988 Nasonia vitripennis Adult Female Nasoni... 46 3.8 1
(GE444759) 294573685 Nasonia vitripennis Adult Female Nasoni... 46 3.8 1
(GE443893) 294570901 Nasonia vitripennis Adult Female Nasoni... 46 3.8 1
(GE438519) 294582809 Nasonia vitripennis Adult Male Nasonia ... 46 3.8 1
(GE425191) 294514936 Nasonia vitripennis Adult Male Nasonia ... 46 3.8 1
(GE408323) 293801016 Nasonia vitripennis Female Pupae Nasoni... 46 3.8 1
(GE406150) 293796397 Nasonia vitripennis Female Pupae Nasoni... 46 3.8 1
(GE405274) 293794484 Nasonia vitripennis Female Pupae Nasoni... 46 3.8 1
(GE404014) 293792593 Nasonia vitripennis Female Pupae Nasoni... 46 3.8 1
(GE402975) 293791057 Nasonia vitripennis Female Pupae Nasoni... 46 3.8 1
(GE402023) 293788547 Nasonia vitripennis Female Pupae Nasoni... 46 3.8 1
(GE399746) 293785472 Nasonia vitripennis Female Pupae Nasoni... 46 3.8 1
(GE397982) 293783168 Nasonia vitripennis Female Pupae Nasoni... 46 3.8 1
(GE395770) 293778736 Nasonia vitripennis Female Pupae Nasoni... 46 3.8 1
(GE381155) 292374493 Nasonia vitripennis Male Pupae Nasonia ... 46 3.8 1
(GE380503) 292370635 Nasonia vitripennis Male Pupae Nasonia ... 46 3.8 1
(GE377851) 292325819 Nasonia vitripennis Male Pupae Nasonia ... 46 3.8 1
(GE377776) 292322137 Nasonia vitripennis Male Pupae Nasonia ... 46 3.8 1
(GE368962) 292298260 Nasonia vitripennis Male Pupae Nasonia ... 46 3.8 1
(GE367295) 292294484 Nasonia vitripennis Male Pupae Nasonia ... 46 3.8 1
(GE361988) 292285566 Nasonia vitripennis Male Pupae Nasonia ... 46 3.8 1
(GE360564) 292282374 Nasonia vitripennis Male Pupae Nasonia ... 46 3.8 1
(GE358475) 292277833 Nasonia vitripennis Male Pupae Nasonia ... 46 3.8 1
(GE357192) 292274104 Nasonia vitripennis Male Pupae Nasonia ... 46 3.8 1
(FF381093) CASLH46TF CASL Manihot esculenta cDNA 5', mRNA se... 46 3.8 1
(ES638029) NVPCU54TR NVPA Nasonia vitripennis cDNA, mRNA seq... 46 3.8 1
(ES614728) NGPAG72TR NGPA Nasonia giraulti cDNA, mRNA sequence. 46 3.8 1
(AP002981) Homo sapiens genomic DNA, chromosome 8q23, clone:... 44 3.8 6
(EJ305000) 1095390072565 Global-Ocean-Sampling_GS-27-01-01-1... 44 4.0 2
(AC229762) Oryza minuta clone OM__Ba0149B10, complete sequence. 36 4.5 6
(CP001668) Mycoplasma mycoides subsp. capri str. GM12 transg... 34 5.3 21
(BX005018) Zebrafish DNA sequence from clone DKEY-209K18. 38 5.6 5
(CP001621) Mycoplasma mycoides subsp. capri str. GM12 transg... 34 5.6 21
(DD010736) Diagnosis of known genetic Parameters within the ... 34 5.6 2
(CR511434) mth4-28M5FM3 BAC end, cultivar Jemalong A17 of Me... 34 5.8 2
(CG750615) P045-1-F07.za Ppa EcoRI BAC Library Pristionchus ... 44 6.3 2
(AX346773) Sequence 1844 from Patent WO0200928. 42 6.3 3
(AX344570) Sequence 21 from Patent WO0200932. 34 6.7 2
(AX344569) Sequence 20 from Patent WO0200932. 34 6.7 2
(AL844856) Mouse DNA sequence from clone RP23-377G1 on chrom... 40 6.7 8
(AC131476) Rattus norvegicus clone CH230-43J6, *** SEQUENCIN... 34 6.8 2
(AC094301) Rattus norvegicus clone CH230-3I6, *** SEQUENCING... 34 6.8 2
(CU468902) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 6.9 2
(AC235271) Glycine max strain Williams 82 clone GM_WBb0046B1... 36 7.7 6
(EU016585) Uncultured marine microorganism HF4000_141I21 fos... 40 7.8 4
(EU795135) Uncultured Rickettsiales bacterium ANIW_[384]141I... 40 7.8 4
(AX345802) Sequence 873 from Patent WO0200928. 34 8.5 2
(AC215940) Populus trichocarpa clone POP034-C23, complete se... 36 8.7 5
(EA694789) Sequence 73668 from patent US 7365185. 44 8.7 2
(AC233930) Zea mays chromosome 9 clone ZMMBBb-412G11; ZMMBBb... 38 9.3 3
(CG848015) ZMMBBb0319H06.r ZMMBBb Zea mays subsp. mays genom... 32 9.4 2
(BZ270196) CH230-327E22.TJ CHORI-230 Segment 2 Rattus norveg... 34 9.5 2
(AL353900) Human DNA sequence from clone RP11-202C2 on chrom... 42 9.5 6
(FJ427416) Daphnia dentifera small subunit ribosomal RNA gen... 40 9.7 2
(CO075015) GR__Ea35H06.f GR__Ea Gossypium raimondii cDNA clo... 32 9.7 2
(U34641) Daphnia thorata 12S ribosomal RNA, mitochondrial ge... 40 9.8 2
>(BJ390568) Dictyostelium discoideum cDNA clone:dds22l21, 5' end,
single read.
Length = 623
Score = 1019 bits (514), Expect(2) = 0.0
Identities = 514/514 (100%)
Strand = Plus / Plus
Query: 270 ttatgacattagtatcaaatattgttggtattgttgtaccagttgttattgcgctgataa 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 ttatgacattagtatcaaatattgttggtattgttgtaccagttgttattgcgctgataa 169
Query: 330 tacttataattttacttaaaaagagtttattaatattaaaagaaagagaaatcattatac 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tacttataattttacttaaaaagagtttattaatattaaaagaaagagaaatcattatac 229
Query: 390 tagaacgttttggacaatatcataatatattacatgctggtgtacattggacaattccat 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tagaacgttttggacaatatcataatatattacatgctggtgtacattggacaattccat 289
Query: 450 gggttgatagaccaaaaacattttattattcatattacgttgatacaccaagtggtaaag 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gggttgatagaccaaaaacattttattattcatattacgttgatacaccaagtggtaaag 349
Query: 510 agttaagagaaggtttaaatttaacaagaatttcaactcaaaatgaagttttagatttac 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 agttaagagaaggtttaaatttaacaagaatttcaactcaaaatgaagttttagatttac 409
Query: 570 caaaacaaactgttattacaagagattgtgcatcagttgatttagatgcagttttatcat 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 caaaacaaactgttattacaagagattgtgcatcagttgatttagatgcagttttatcat 469
Query: 630 ataaaattacaaatccaaaacaaatgatttatagttgtgtaaatttaccaaatatccttt 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ataaaattacaaatccaaaacaaatgatttatagttgtgtaaatttaccaaatatccttt 529
Query: 690 caaaactattacaagctcaattaagaaatttagcaggtacattagagattgatcaaatca 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 caaaactattacaagctcaattaagaaatttagcaggtacattagagattgatcaaatca 589
Query: 750 ttgaagaatcacacctattaaatgctctcactgg 783
||||||||||||||||||||||||||||||||||
Sbjct: 590 ttgaagaatcacacctattaaatgctctcactgg 623
Score = 147 bits (74), Expect(2) = 0.0
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 188 gttacattcctccctcctccttcctcttcccaatccaacctattcacatacctatacaca 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28 gttacattcctccctcctccttcctcttcccaatccaacctattcacatacctatacaca 87
Query: 248 tattttttatatat 261
||||||||||||||
Sbjct: 88 tattttttatatat 101
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 1,598,404,052
Number of extensions: 102027050
Number of successful extensions: 8902554
Number of sequences better than 10.0: 165
Length of query: 1374
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 1350
Effective length of database: 104,103,628,548
Effective search space: 140539898539800
Effective search space used: 140539898539800
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home