Dictyostelium discoideum cDNA Contig-U09569-1

Assembled

Chromosomal Location of Contig-U09569-1

Sequence Contig-U09569-1

CACTGTTGGC CTACTGGNAA AAAAAAAAGA TTCCAAAATA ATAAAATGAA
CAAATTAATT AAAATCATTG TAATTTTTAC AATTATTGTA AATGTAATTA
ATGGTTTAGC ATATCCAAAA TATAATGCAG AAGAATTAAT ATTGGATGGT
AGTGGTAGTT TCCCAGCACA ATGGTTCACT CAAACATTAG ATCATTTTAA
TTTTCAAAAT AATCAAACAT TTCAACAAAA ATATTATGTA AATGATCAAT
ATTATAACTA TAAAAATGGT GGACCAATCA TTTTATACAT TAATGGTGAA
GGTCCAGTTA GTTCACCACC ATATTCTTCT GATGATGGTG TTGTAATTTA
TGCTCAAGCA TTAAATTGTA TGATTGTTAC ATTAGAACAT AGATTTTATG
GTGAATCATC ACCATTTTCA GAATTAACAA TTGAAAATTT ACAATATCTT
AGTCATCAAC AAGCATTGGA AGATTTAGCA ACATTTGTTG TTGATTTTCA
AAGTAAACTT GTTGGTGCAG GTCATATTGT TACAATTGGT GGATCATATA
GTGGAGCATT ATCAGCATGG TTCCGTATAA AGTATCCACA TATTACTGTT
GGTTCAATTG CATCATTAGG TGTTGTACAT TCAATTTTAG ATTTCACTGC
ATTCGATGCC TATGTATCAT ATGCTG---- ------AAAC AAATACTTCA
AGCTGAATCA TTGGTTGATA TTGGTGATTT CTTTTATTGG TTAGCCGATT
CGATGATGGA GGGTGACCAA TACGGCTACA TAGATGAATT ATGTAGTCCA
TTGGTTGACG CTATCAATAG CGGTACCAGT GGTATCGATT TGATTACAGT
CTACTCCAAT TACACTATCA ACACTTGGGG TAAAGTTTTA GGTACTCCAG
ATGAATATTC AACAGCTTGG CAACAAAATG TCACCTATGA CCCATCAAAG
AGTGCCGATA GAGCTTGGTG GTATCAAACT TGTAGTTCAT TAGGTTGGAT
GCAAGCTGCA CCATCTGAAA ATTCAATTAG ATCTTCATTG GTAAATATGA
CCTATTTCCA AACTCATTGT CAACAATTAT TCGGTCAAGC CATTTGGCCT
CCAAATGTAA ATGCTGTAAA TACTCAATAC GGTGGTGATC AATCAAATCC
ATTATTGAAT GCAGCTGGTA CTAATATTTT ATTCACCAAT GGTCATGCTG
ATCCATGGAG TCAAGCTTCA ATCGTAAATT CAAATTATCC AAATGTTGAA
CCCTCTGCAA TGACCACTTG TCGTAAATGT GGTCATTGTG TAGATTTAAG
AGGTTGTCCA GGTGGTTGTG ATTTACCAAA TAATTTAGAT CAAGTTAGAT
CACTTTCATT AAAATCAATT GCACAATGGT TAAATTTAAA TAATTAAAAA
TAAAATAAAT ATAAAATAAA ATAAAAATTA ACAA

Translated Amino Acid Sequence Contig-U09569-1

HCWPTGKKKRFQNNKMNKLIKIIVIFTIIVNVINGLAYPKYNAEELILDGSGSFPAQWFT
QTLDHFNFQNNQTFQQKYYVNDQYYNYKNGGPIILYINGEGPVSSPPYSSDDGVVIYAQA
LNCMIVTLEHRFYGESSPFSELTIENLQYLSHQQALEDLATFVVDFQSKLVGAGHIVTIG
GSYSGALSAWFRIKYPHITVGSIASLGVVHSILDFTAFDAYVSYA---

---KQILQAESLVDIGDFFYWLADSMMEGDQYGYIDELCSPLVDAINSGTSGIDLITVYS
NYTINTWGKVLGTPDEYSTAWQQNVTYDPSKSADRAWWYQTCSSLGWMQAAPSENSIRSS
LVNMTYFQTHCQQLFGQAIWPPNVNAVNTQYGGDQSNPLLNAAGTNILFTNGHADPWSQA
SIVNSNYPNVEPSAMTTCRKCGHCVDLRGCPGGCDLPNNLDQVRSLSLKSIAQWLNLNN*
k*nkykik*klt

Homology Contig-U09569-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U09569-1 (Contig-U09569-1Q) /CSM_Contig/Conti...  2619  0.0
Contig-U10799-1 (Contig-U10799-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U06117-1 (Contig-U06117-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U13639-1 (Contig-U13639-1Q) /CSM_Contig/Conti...    40  0.007
Contig-U12423-1 (Contig-U12423-1Q) /CSM_Contig/Conti...    38  0.026
Contig-U11153-1 (Contig-U11153-1Q) /CSM_Contig/Conti...    38  0.026
Contig-U11145-1 (Contig-U11145-1Q) /CSM_Contig/Conti...    38  0.026
Contig-U12940-1 (Contig-U12940-1Q) /CSM_Contig/Conti...    36  0.10
Contig-U06855-1 (Contig-U06855-1Q) /CSM_Contig/Conti...    36  0.10

Homology Contig-U09569-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ430101) Dictyostelium discoideum cDNA clone:ddv6h04, 3' e...  1330   0.0    1
(BJ434169) Dictyostelium discoideum cDNA clone:ddv16h03, 3' ...  1318   0.0    1
(BJ432165) Dictyostelium discoideum cDNA clone:ddv17j24, 3' ...  1316   0.0    1
(BJ433808) Dictyostelium discoideum cDNA clone:ddv23b03, 3' ...  1209   0.0    1
(BJ433981) Dictyostelium discoideum cDNA clone:ddv23e13, 3' ...  1172   0.0    1
(BJ415570) Dictyostelium discoideum cDNA clone:ddv23b03, 5' ...  1136   0.0    1
(BJ430163) Dictyostelium discoideum cDNA clone:ddv6e09, 3' e...  1096   0.0    1
(BJ435287) Dictyostelium discoideum cDNA clone:ddv26m14, 3' ...  1061   0.0    1
(BJ414048) Dictyostelium discoideum cDNA clone:ddv17j24, 5' ...  1033   0.0    1
(BJ411913) Dictyostelium discoideum cDNA clone:ddv6e09, 5' e...  1021   0.0    1

Homology Contig-U09569-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AK070496_1(AK070496|pid:none) Oryza sativa Japonica Group cDNA c...   152   1e-67
EU964441_1(EU964441|pid:none) Zea mays clone 278922 prolyl carbo...   145   4e-66
FB848276_1(FB848276|pid:none) Sequence 67549 from Patent WO20080...   145   6e-66
FB848274_1(FB848274|pid:none) Sequence 67547 from Patent WO20080...   141   1e-65
EF085613_1(EF085613|pid:none) Picea sitchensis clone WS0289_O21 ...   153   3e-65
FB848280_1(FB848280|pid:none) Sequence 67553 from Patent WO20080...   144   6e-65
BT030459_1(BT030459|pid:none) Arabidopsis thaliana At4g36190 mRN...   143   1e-64
AK176014_1(AK176014|pid:none) Arabidopsis thaliana mRNA for prol...   139   3e-64
AK175200_1(AK175200|pid:none) Arabidopsis thaliana mRNA for prol...   139   3e-64
AK176922_1(AK176922|pid:none) Arabidopsis thaliana mRNA for prol...   139   4e-64