Homology Contig-U09487-1 vs Protein
Query= Contig-U09487-1 (Contig-U09487-1Q) /CSM_Contig/Contig-U09487-1Q.Seq.d
(603 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CP000581_458(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 43 0.008
AE017343_163(AE017343|pid:none) Cryptococcus neoformans var. neo... 41 0.029
AC116305_58(AC116305|pid:none) Dictyostelium discoideum chromoso... 40 0.065
EU041719_1(EU041719|pid:none) Pisum sativum lectin kinase mRNA, ... 35 1.2
CP001574_448(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 35 1.2
AB265221_1(AB265221|pid:none) Nicotiana tabacum NtlecRK1 mRNA fo... 35 1.2
AE017226_2396(AE017226|pid:none) Treponema denticola ATCC 35405,... 35 2.1
CR382130_117(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 35 2.1
AF162444_1(AF162444|pid:none) Arabidopsis thaliana BAC T32N4. &... 34 3.6
AK229495_1(AK229495|pid:none) Arabidopsis thaliana mRNA for hypo... 34 3.6
AM180355_247(AM180355|pid:none) Clostridium difficile 630 comple... 33 6.1
>CP000581_458(CP000581|pid:none) Ostreococcus lucimarinus CCE9901
chromosome 1, complete sequence.
Length = 1009
Score = 42.7 bits (99), Expect = 0.008
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 29/132 (21%)
Frame = +3
Query: 276 DPXGNHISIHTRSLEPNSSHHRFSLGYGXPKNXXP---MNDGIEHECFIKYS-------- 422
+P +H++IHTR PN++H SL P + DG HE FI Y
Sbjct: 864 EPRESHVAIHTRGKSPNTAHSAASLATVALDGSVPTTSITDGQIHEVFITYKPNITSEEM 923
Query: 423 ----------------TSNGDDGDSTIDVWLDKY-QVLYKIKANIQKLL-NLHENKSCFI 548
+++ D + V+LD L + NI+ +L + + S ++
Sbjct: 924 FFAIESGEITGLSTALSAHTADSLGVVSVYLDDMSSPLMSVPFNIESILRDSATSGSAWV 983
Query: 549 GMTASTGGLKQA 584
G TA+TG L QA
Sbjct: 984 GFTAATGDLWQA 995
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 723,441,097
Number of extensions: 12884220
Number of successful extensions: 25077
Number of sequences better than 10.0: 11
Number of HSP's gapped: 25073
Number of HSP's successfully gapped: 11
Length of query: 201
Length of database: 1,040,966,779
Length adjustment: 122
Effective length of query: 79
Effective length of database: 650,044,009
Effective search space: 51353476711
Effective search space used: 51353476711
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
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