Homology Contig-U09487-1 vs Protein

Query= Contig-U09487-1 (Contig-U09487-1Q) /CSM_Contig/Contig-U09487-1Q.Seq.d
         (603 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP000581_458(CP000581|pid:none) Ostreococcus lucimarinus CCE9901...    43   0.008
AE017343_163(AE017343|pid:none) Cryptococcus neoformans var. neo...    41   0.029
AC116305_58(AC116305|pid:none) Dictyostelium discoideum chromoso...    40   0.065
EU041719_1(EU041719|pid:none) Pisum sativum lectin kinase mRNA, ...    35   1.2
CP001574_448(CP001574|pid:none) Micromonas sp. RCC299 chromosome...    35   1.2
AB265221_1(AB265221|pid:none) Nicotiana tabacum NtlecRK1 mRNA fo...    35   1.2
AE017226_2396(AE017226|pid:none) Treponema denticola ATCC 35405,...    35   2.1
CR382130_117(CR382130|pid:none) Yarrowia lipolytica strain CLIB1...    35   2.1
AF162444_1(AF162444|pid:none) Arabidopsis thaliana BAC T32N4.  &...    34   3.6
AK229495_1(AK229495|pid:none) Arabidopsis thaliana mRNA for hypo...    34   3.6
AM180355_247(AM180355|pid:none) Clostridium difficile 630 comple...    33   6.1

>CP000581_458(CP000581|pid:none) Ostreococcus lucimarinus CCE9901
            chromosome 1, complete sequence.
          Length = 1009

 Score = 42.7 bits (99), Expect = 0.008
 Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 29/132 (21%)
 Frame = +3

Query: 276  DPXGNHISIHTRSLEPNSSHHRFSLGYGXPKNXXP---MNDGIEHECFIKYS-------- 422
            +P  +H++IHTR   PN++H   SL         P   + DG  HE FI Y
Sbjct: 864  EPRESHVAIHTRGKSPNTAHSAASLATVALDGSVPTTSITDGQIHEVFITYKPNITSEEM 923

Query: 423  ----------------TSNGDDGDSTIDVWLDKY-QVLYKIKANIQKLL-NLHENKSCFI 548
                            +++  D    + V+LD     L  +  NI+ +L +   + S ++
Sbjct: 924  FFAIESGEITGLSTALSAHTADSLGVVSVYLDDMSSPLMSVPFNIESILRDSATSGSAWV 983

Query: 549  GMTASTGGLKQA 584
            G TA+TG L QA
Sbjct: 984  GFTAATGDLWQA 995

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 723,441,097
Number of extensions: 12884220
Number of successful extensions: 25077
Number of sequences better than 10.0: 11
Number of HSP's gapped: 25073
Number of HSP's successfully gapped: 11
Length of query: 201
Length of database: 1,040,966,779
Length adjustment: 122
Effective length of query: 79
Effective length of database: 650,044,009
Effective search space: 51353476711
Effective search space used: 51353476711
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)




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