Dictyostelium discoideum cDNA Contig-U09487-1

Assembled

Chromosomal Location of Contig-U09487-1

Sequence Contig-U09487-1

ATCTAAAACT ATAAATTTAA TATATAATGA TAAAGAATAT TTAGTAGAAG
TTGAAAATGA ATGCACATAT GAAGATTTTC AAATATTAGT TTTTTCAGTT
ACAGATGTTG ATCCAACATT TCAAAGATTT TATTATTTAT CAAATTCAAA
ATTAAGAGAT CCTTCGCCAA CTGAAAAAAT TATTGTTTTA AATAATCAAA
AAATTTTATT ATCAAATTTA AAATCATTTA AATTACCAAT TAAAATTGAA
AATGG----- -----TCATT GTAAAGACCC AGNTGGTAAT CATATTTCAA
TTCATACTAG ATCATTAGAA CCAAATTCTT CTCATCATAG ATTCTCTTTA
GGTTATGGTA ANCCAAAAAA TANTAANCCA ATGAATGATG GTATTGAACA
TGAATGTTTT ATTAAATATT CAACTTCAAA TGGTGATGAT GGTGATAGTA
CAATTGATGT TTGGTTAGAT AAATATCAAG TTTTATATAA AATAAAAGCA
AATATCCAAA AATTATTAAA TTTACATGAA AATAAATCTT GTTTCATTGG
TATGACTGCT TCAACTGGTG GTTTAAAACA AGCTCATATA AAAAAAAAAA
AAA

Translated Amino Acid Sequence Contig-U09487-1

SKTINLIYNDKEYLVEVENECTYEDFQILVFSVTDVDPTFQRFYYLSNSKLRDPSPTEKI
IVLNNQKILLSNLKSFKLPIKIEN---

---HCKDPXGNHISIHTRSLEPNSSHHRFSLGYGXPKNXXPMNDGIEHECFIKYSTSNGD
DGDSTIDVWLDKYQVLYKIKANIQKLLNLHENKSCFIGMTASTGGLKQAHIKKKK

Homology Contig-U09487-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U09487-1 (Contig-U09487-1Q) /CSM_Contig/Conti...   402  e-112
Contig-U10394-1 (Contig-U10394-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U08797-1 (Contig-U08797-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U03053-1 (Contig-U03053-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U13922-1 (Contig-U13922-1Q) /CSM_Contig/Conti...    36  0.042
Contig-U13114-1 (Contig-U13114-1Q) /CSM_Contig/Conti...    36  0.042
Contig-U11354-1 (Contig-U11354-1Q) /CSM_Contig/Conti...    36  0.042
Contig-U06263-1 (Contig-U06263-1Q) /CSM_Contig/Conti...    36  0.042
Contig-U03728-1 (Contig-U03728-1Q) /CSM_Contig/Conti...    36  0.042
Contig-U00451-1 (Contig-U00451-1Q) /CSM_Contig/Conti...    36  0.042

Homology Contig-U09487-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU038636) Dictyostelium discoideum slug cDNA, clone SSL283.      379   e-124  2
(AU074570) Dictyostelium discoideum slug cDNA, clone SSL283.      343   5e-90  1
(GR569465) CBTF4602.g1 CBTF Dictyostelium purpureum 12 hr ve...    60   2e-14  4
(GR584909) CCAA2802.g1 CCAA Dictyostelium purpureum 0 hr sta...    60   1e-04  1
(CU302195) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    50   0.10   1
(CU582821) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    40   0.14   4
(CU862080) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    36   0.23   2
(CR853293) Zebrafish DNA sequence from clone CH211-81J7 in l...    36   0.24   2
(AL672097) Zebrafish DNA sequence from clone BUSM1-37O5 in l...    36   0.24   2
(BX294374) Zebrafish DNA sequence from clone CH211-260F12 in...    36   0.27   2

Homology Contig-U09487-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP000581_458(CP000581|pid:none) Ostreococcus lucimarinus CCE9901...    43   0.008
AE017343_163(AE017343|pid:none) Cryptococcus neoformans var. neo...    41   0.029
AC116305_58(AC116305|pid:none) Dictyostelium discoideum chromoso...    40   0.065
EU041719_1(EU041719|pid:none) Pisum sativum lectin kinase mRNA, ...    35   1.2
CP001574_448(CP001574|pid:none) Micromonas sp. RCC299 chromosome...    35   1.2
AB265221_1(AB265221|pid:none) Nicotiana tabacum NtlecRK1 mRNA fo...    35   1.2
AE017226_2396(AE017226|pid:none) Treponema denticola ATCC 35405,...    35   2.1
CR382130_117(CR382130|pid:none) Yarrowia lipolytica strain CLIB1...    35   2.1
AF162444_1(AF162444|pid:none) Arabidopsis thaliana BAC T32N4.  &...    34   3.6
AK229495_1(AK229495|pid:none) Arabidopsis thaliana mRNA for hypo...    34   3.6