Homology Contig-U09481-1 vs Protein
Query= Contig-U09481-1 (Contig-U09481-1Q) /CSM_Contig/Contig-U09481-1Q.Seq.d
(804 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC117075_85(AC117075|pid:none) Dictyostelium discoideum chromoso... 280 5e-74
AC114265_1(AC114265|pid:none) Dictyostelium discoideum chromosom... 54 6e-06
AC115604_12(AC115604|pid:none) Dictyostelium discoideum chromoso... 41 0.052
CP001047_564(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 35 2.2
BC157940_1(BC157940|pid:none) Mus musculus phosphatidylinositol-... 33 8.3
(Q69ZK0) RecName: Full=Phosphatidylinositol 3,4,5-trisphosphate-... 33 8.3
AL591884_1(AL591884|pid:none) Mouse DNA sequence from clone RP23... 33 8.3
>AC117075_85(AC117075|pid:none) Dictyostelium discoideum chromosome
2 map 5201047-5455781 strain AX4, complete sequence.
Length = 783
Score = 280 bits (715), Expect = 5e-74
Identities = 148/194 (76%), Positives = 148/194 (76%)
Frame = +1
Query: 175 LSFLPNSTQILKEGWFCSTKFSHQTTSLLYLLKQIHNKVDDRVIEIIKSLDILKFLKDWI 354
LSFLPNSTQILKEGWFCSTKFSHQTTSLLYLLKQIHNKVDDRVIEIIKSLDILKFLKDWI
Sbjct: 218 LSFLPNSTQILKEGWFCSTKFSHQTTSLLYLLKQIHNKVDDRVIEIIKSLDILKFLKDWI 277
Query: 355 TSINDLNDKSIQLLNKSNHLIINRSKSNFKXXXXXXXXXXXXXXXXXXXXIKSGNDNTHF 534
TSINDLNDKSIQLLNKSNHLIINRSKSNFK IKSGNDNTHF
Sbjct: 278 TSINDLNDKSIQLLNKSNHLIINRSKSNFKNNQNQNNNNNNVNVNINEEIIKSGNDNTHF 337
Query: 535 EIQLPIGLIKSLYCKLIRLKNEFNKLIIPLSPNLKYXXXXXXXXXXXXXXXXXXXXXXXX 714
EIQLPIGLIKSLYCKLIRLKNEFNKLIIPLSPNLK
Sbjct: 338 EIQLPIGLIKSLYCKLIRLKNEFNKLIIPLSPNLKDNNNNNNNNNNNNINNNKNEIKNKN 397
Query: 715 XTHWELLEIIEPIV 756
THWELLEIIEPIV
Sbjct: 398 KTHWELLEIIEPIV 411
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 544,442,347
Number of extensions: 5951079
Number of successful extensions: 18228
Number of sequences better than 10.0: 7
Number of HSP's gapped: 18221
Number of HSP's successfully gapped: 7
Length of query: 268
Length of database: 1,040,966,779
Length adjustment: 126
Effective length of query: 142
Effective length of database: 637,226,869
Effective search space: 90486215398
Effective search space used: 90486215398
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home