Homology Contig-U09481-1 vs DNA
Query= Contig-U09481-1 (Contig-U09481-1Q) /CSM_Contig/Contig-U09481-1Q.Seq.d
(804 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(C94467) Dictyostelium discoideum slug cDNA, clone SSL137. 365 e-132 3
(BJ432098) Dictyostelium discoideum cDNA clone:ddv17j16, 3' ... 52 0.035 1
(BJ357925) Dictyostelium discoideum cDNA clone:dda65m04, 3' ... 52 0.035 1
(BJ345714) Dictyostelium discoideum cDNA clone:dda28h13, 3' ... 52 0.035 1
(AC186909) Microcebus murinus clone CH257-155I17, WORKING DR... 48 0.099 3
(DN915427) MCF7RNAL20B22TR Human MCF7 breast cancer cell lin... 34 0.42 2
(EJ492322) 1095403548077 Global-Ocean-Sampling_GS-28-01-01-1... 46 0.43 2
(BX511266) Zebrafish DNA sequence from clone CH211-245D7 in ... 48 0.55 1
(AL954634) Zebrafish DNA sequence from clone DKEY-58C20 in l... 48 0.55 1
(CU302431) Mouse DNA sequence from clone DN-11J18 on chromos... 48 0.55 1
(AL606921) Mouse DNA sequence from clone RP23-209C6 on chrom... 48 0.55 1
(AL162574) Human DNA sequence from clone RP11-282A11 on chro... 48 0.55 1
(AC207964) Homo sapiens FOSMID clone ABC9-43974600O3 from ch... 48 0.55 1
(CU302405) Mouse DNA sequence *** SEQUENCING IN PROGRESS ***... 48 0.55 1
(CU104792) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.55 1
(CT030213) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.55 1
(BX546458) Mouse DNA sequence *** SEQUENCING IN PROGRESS ***... 48 0.55 1
(AC218305) Bos taurus clone CH240-288C7, WORKING DRAFT SEQUE... 48 0.55 1
(AC023555) Homo sapiens clone RP11-600K3, WORKING DRAFT SEQU... 48 0.55 1
(ER340024) 1092344337617 Global-Ocean-Sampling_GS-34-01-01-1... 48 0.55 1
(EK274203) 1095462270070 Global-Ocean-Sampling_GS-31-01-01-1... 34 0.79 3
(AC026576) Homo sapiens chromosome 1 clone RP11-294O9 map 1,... 46 1.1 2
(AU061539) Dictyostelium discoideum slug cDNA, clone SLE589. 40 1.2 2
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 36 1.2 9
(AC196377) Macaca mulatta clone CH250-126G11, WORKING DRAFT ... 46 1.2 3
(CZ534355) SRAA-aac90g06.g1 Strongyloides ratti whole genome... 34 1.5 2
(CZ534537) SRAA-aac91g06.g1 Strongyloides ratti whole genome... 34 1.5 2
(AC109097) Rattus norvegicus clone CH230-223G15, *** SEQUENC... 44 1.5 2
(EI471390) PV_GBa0079M21.f PV_GBa Phaseolus vulgaris genomic... 34 1.5 2
(AL590429) Mouse DNA sequence from clone RP23-462O16 on chro... 46 2.2 1
(AM479183) Vitis vinifera contig VV78X037456.3, whole genome... 46 2.2 1
(AM461481) Vitis vinifera contig VV78X166797.7, whole genome... 46 2.2 1
(AM433804) Vitis vinifera contig VV78X108417.10, whole genom... 46 2.2 1
(DJ334084) THERAPEUTIC GPCR TARGETS IN CANCER. 46 2.2 1
(CS788894) Sequence 150 from Patent WO2005031001. 46 2.2 1
(CQ868595) Sequence 7 from Patent WO2004074321. 46 2.2 1
(GN374146) Sequence 7 from Patent EP2058408. 46 2.2 1
(GC859427) Sequence 174672 from patent US 6812339. 46 2.2 1
(GC859426) Sequence 174671 from patent US 6812339. 46 2.2 1
(GC701433) Sequence 16678 from patent US 6812339. 46 2.2 1
(AL445163) Human DNA sequence from clone RP11-214J24 on chro... 46 2.2 1
(AC117952) Rattus norvegicus clone CH230-167E2, *** SEQUENCI... 46 2.2 1
(AC097044) Rattus norvegicus clone CH230-135H5, *** SEQUENCI... 46 2.2 1
(AC201093) Strongylocentrotus purpuratus clone R3-13G20, WOR... 46 2.2 1
(AC172310) Strongylocentrotus purpuratus clone R3-14D7, WORK... 46 2.2 1
(ER618792) 1093017371273 Global-Ocean-Sampling_GS-36-01-01-2... 46 2.2 1
(EJ262283) 1095349048558 Global-Ocean-Sampling_GS-27-01-01-1... 46 2.2 1
(CE804101) tigr-gss-dog-17000317822738 Dog Library Canis lup... 46 2.2 1
(AJ685186) Sus scrofa EST, clone C0001808_C16. 46 2.2 1
(BJ985874) Bombyx mori cDNA, clone:E_FL_mxg-_20F23_F_0, 5' e... 46 2.2 1
(BX548016) Zebrafish DNA sequence from clone DKEY-97O7 in li... 36 2.4 4
(AC148996) Medicago truncatula chromosome 2 clone mth2-78f22... 42 2.7 4
(BX649334) Zebrafish DNA sequence from clone DKEYP-6A3 in li... 38 4.0 3
(AC186890) Zea mays chromosome 6 clone CH201-466I13; ZMMBBc0... 34 4.1 2
(AC206350) Zea mays chromosome 3 clone CH201-120J22; ZMMBBc0... 34 4.1 2
(AC198202) Zea mays chromosome 3 clone CH201-81A23; ZMMBBc00... 34 4.1 2
(AC194087) Zea mays chromosome 6 clone CH201-410I4; ZMMBBc04... 34 4.1 2
(AC203764) Zea mays chromosome 6 clone CH201-376K3; ZMMBBc03... 34 4.1 2
(AC193746) Zea mays chromosome 3 clone ZMMBBb-80N23; ZMMBBb0... 34 4.2 2
(AC204605) Zea mays chromosome 4 clone CH201-57F11; ZMMBBc00... 34 4.2 2
(AC206992) Zea mays chromosome 8 clone CH201-119C6; ZMMBBc01... 34 4.2 2
(AC218934) Zea mays chromosome 3 clone CH201-460K16; ZMMBBc0... 34 4.2 2
(AJ890074) Ochthebius montesi mitochondrial partial COI gene... 40 4.2 2
(AJ890072) Ochthebius montesi mitochondrial partial COI gene... 40 4.4 2
(AJ890073) Ochthebius montesi mitochondrial partial COI gene... 40 4.4 2
(AJ890071) Ochthebius montesi mitochondrial partial COI gene... 40 4.4 2
(AM457601) Vitis vinifera, whole genome shotgun sequence, co... 40 4.4 3
(AC152552) Medicago truncatula clone mth2-72m3, WORKING DRAF... 42 4.5 3
(DM022315) METHODS AND NUCLEIC ACIDS FOR THE ANALYSIS OF GEN... 36 4.8 2
(DM022187) METHODS AND NUCLEIC ACIDS FOR THE ANALYSIS OF GEN... 36 4.8 2
(CS623683) Sequence 234 from Patent WO2006071466. 36 4.8 2
(CS623555) Sequence 106 from Patent WO2006071466. 36 4.8 2
(BK006336) TPA_exp: Drosophila ananassae mitochondrion, comp... 34 4.8 2
(AC159087) Bos taurus clone CH240-7O8, WORKING DRAFT SEQUENC... 40 4.9 2
(EC824434) SME00005137 esmbsro2 Sawyeria marylandensis cDNA,... 42 4.9 2
(CL780055) OR_BBa0095F06.f OR_BBa Oryza nivara genomic clone... 38 4.9 2
(CU749683) A BAC library has been constructed from PN40024 g... 34 5.3 3
(AY958403) Drosophila biarmipes NADH dehydrogenase subunit 4... 34 5.4 2
(AY958399) Drosophila ananassae NADH dehydrogenase subunit 4... 34 5.4 2
(EU494005) Drosophila paramelanica voucher 109372 NADH dehyd... 34 5.4 2
(EU494003) Drosophila melanica voucher 105499 NADH dehydroge... 34 5.4 2
(EU494032) Drosophila paulistorum voucher 107546 NADH dehydr... 34 5.4 2
(EU493972) Drosophila cardini voucher 103963 NADH dehydrogen... 34 5.4 2
(EU493984) Drosophila pararubida voucher 109401 NADH dehydro... 34 5.5 2
(EU494007) Drosophila putrida voucher 103964 NADH dehydrogen... 34 5.6 2
(BZ990857) PUFIT61TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 34 5.6 2
(EB590011) AGENCOURT_51482369 D. ananassae EST Drosophila an... 34 5.6 2
(FI281654) AdH1029-CPY2-E16TF AdH1 Arachis duranensis genomi... 34 5.6 2
(EB579675) AGENCOURT_51403382 D. ananassae EST Drosophila an... 34 5.6 2
(EB581171) AGENCOURT_51895035 D. ananassae EST Drosophila an... 34 5.6 2
(EB590410) AGENCOURT_51502259 D. ananassae EST Drosophila an... 34 5.6 2
(EB576787) AGENCOURT_51401591 D. ananassae EST Drosophila an... 34 5.6 2
(EB591129) AGENCOURT_51395990 D. ananassae EST Drosophila an... 34 5.6 2
(EB588189) AGENCOURT_51488499 D. ananassae EST Drosophila an... 34 5.6 2
(EB588055) AGENCOURT_51488043 D. ananassae EST Drosophila an... 34 5.6 2
(EB583994) AGENCOURT_51498159 D. ananassae EST Drosophila an... 34 5.6 2
(EB587860) AGENCOURT_50935641 D. ananassae EST Drosophila an... 34 5.6 2
(EB578642) AGENCOURT_51786823 D. ananassae EST Drosophila an... 34 5.6 2
(EB595392) AGENCOURT_51932188 D. ananassae EST Drosophila an... 34 5.6 2
(EB589816) AGENCOURT_51379911 D. ananassae EST Drosophila an... 34 5.6 2
(EB588305) AGENCOURT_51881776 D. ananassae EST Drosophila an... 34 5.6 2
(EB577184) AGENCOURT_51931899 D. ananassae EST Drosophila an... 34 5.6 2
(EB577580) AGENCOURT_51795187 D. ananassae EST Drosophila an... 34 5.6 2
(EB594903) AGENCOURT_51919830 D. ananassae EST Drosophila an... 34 5.6 2
(EB587385) AGENCOURT_51877697 D. ananassae EST Drosophila an... 34 5.6 2
(EB578988) AGENCOURT_50412755 D. ananassae EST Drosophila an... 34 5.6 2
(EB579214) AGENCOURT_51886413 D. ananassae EST Drosophila an... 34 5.6 2
(EB582790) AGENCOURT_51923715 D. ananassae EST Drosophila an... 34 5.6 2
(EB579166) AGENCOURT_51382712 D. ananassae EST Drosophila an... 34 5.6 2
(EB591504) AGENCOURT_51881697 D. ananassae EST Drosophila an... 34 5.6 2
(EB584252) AGENCOURT_51775480 D. ananassae EST Drosophila an... 34 5.6 2
(EB583185) AGENCOURT_51885468 D. ananassae EST Drosophila an... 34 5.6 2
(EB586586) AGENCOURT_50944263 D. ananassae EST Drosophila an... 34 5.6 2
(EB588560) AGENCOURT_51879539 D. ananassae EST Drosophila an... 34 5.6 2
(BZ698621) PUCEL09TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 34 5.6 2
(CZ298354) ZMMBF0069J01r ZMMBF Zea mays genomic clone ZMMBF0... 34 5.7 2
(CI999642) Drosophila ananassae cDNA, clone: SAM02.CL.2.cl.2... 34 5.7 2
(CJ968957) Drosophila ananassae cDNA, clone: SAM02A01NGRL000... 34 5.9 2
(BD460210) Diagnosis of Diseases Associated with Cell Cycle. 32 6.0 3
(BD452132) Diagnosis of Diseases Associated with Cell Cycle. 32 6.0 3
(AX348935) Sequence 393 from Patent WO0202807. 32 6.0 3
(AX344578) Sequence 3 from Patent WO0200927. 32 6.0 3
(AX344160) Sequence 7 from Patent WO0200926. 32 6.0 3
(AX251746) Sequence 7 from Patent WO0168911. 32 6.0 3
(CK284260) EST746982 Nicotiana benthamiana mixed tissue cDNA... 36 6.1 2
(EG252916) MSAM138334_2751_0871 LCM-dissected maize inbred l... 34 6.1 2
(CU785694) A BAC library has been constructed from PN40024 g... 34 6.3 3
(ET696700) CHO_OF028xa01f1.ab1 CHO_OF Nicotiana tabacum geno... 36 6.7 2
(AL355506) Human DNA sequence from clone RP3-366M24 on chrom... 44 7.2 2
(CR940311) M.truncatula DNA sequence from clone MTH2-17E17 o... 36 7.4 4
(AE017244) Mycoplasma hyopneumoniae 7448, complete genome. 32 8.1 11
(CU929287) Zebrafish DNA sequence from clone CH73-79D15 in l... 44 8.6 1
(CR558303) Zebrafish DNA sequence from clone CH211-183C15 in... 44 8.6 1
(CR318632) Zebrafish DNA sequence from clone CH211-113N10 in... 44 8.6 1
(AC206577) Pongo abelii BAC clone CH276-290E16 from chromoso... 44 8.6 1
(AC205862) Pongo abelii BAC clone CH276-110I20 from chromoso... 44 8.6 1
(AM448994) Vitis vinifera contig VV78X037395.2, whole genome... 44 8.6 1
(AC232531) Brassica rapa subsp. pekinensis clone KBrB086M08,... 44 8.6 1
(AC215373) Solanum lycopersicum chromosome 2 clone C02HBa006... 44 8.6 1
(AC214028) Populus trichocarpa clone POP025-N21, complete se... 44 8.6 1
(CS417713) Sequence 30 from Patent WO2006037733. 44 8.6 1
(GC833122) Sequence 148367 from patent US 6812339. 44 8.6 1
(GC833121) Sequence 148366 from patent US 6812339. 44 8.6 1
(GC833120) Sequence 148365 from patent US 6812339. 44 8.6 1
(GC700662) Sequence 15907 from patent US 6812339. 44 8.6 1
(GC697653) Sequence 12898 from patent US 6812339. 44 8.6 1
(AL844503) Plasmodium falciparum 3D7 chromosome 4. 44 8.6 1
(AJ416800) Allodape mucronata partial mitochondrial CO1 gene... 44 8.6 1
(AB301599) Cerataphis brasiliensis mitochondrial genes for s... 44 8.6 1
(AL591069) Human DNA sequence from clone RP11-72O9 on chromo... 44 8.6 1
(AC090763) Homo sapiens chromosome 15, clone RP11-408F10, co... 44 8.6 1
(AC162651) Bos taurus clone CH240-123B7, WORKING DRAFT SEQUE... 44 8.6 1
(AC152226) Bos taurus clone CH240-6H14, WORKING DRAFT SEQUEN... 44 8.6 1
(AC149076) Danio rerio clone ch211-240h1, WORKING DRAFT SEQU... 44 8.6 1
(AC137419) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 44 8.6 1
(AC137216) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 44 8.6 1
(AC132187) Pan troglodytes clone RP43-47I22, WORKING DRAFT S... 44 8.6 1
(AC129401) Rattus norvegicus clone CH230-101F15, WORKING DRA... 44 8.6 1
(AC126720) Rattus norvegicus clone CH230-5K9, *** SEQUENCING... 44 8.6 1
(AC111550) Rattus norvegicus clone CH230-175E13, *** SEQUENC... 44 8.6 1
(AC109952) Rattus norvegicus clone CH230-306F5, WORKING DRAF... 44 8.6 1
(AC106086) Rattus norvegicus clone CH230-126G18, WORKING DRA... 44 8.6 1
(AC105795) Rattus norvegicus clone CH230-254H13, *** SEQUENC... 44 8.6 1
(AC097296) Rattus norvegicus clone CH230-76M9, *** SEQUENCIN... 44 8.6 1
(CU984556) Brassica rapa subsp. pekinensis clone KBrH001B14,... 44 8.6 1
(CU861592) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.6 1
(CU633695) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.6 1
(AC068866) Homo sapiens chromosome 15 clone RP11-448N8 map 1... 44 8.6 1
(AC040893) Homo sapiens chromosome 6 clone RP11-722N5 map 6,... 44 8.6 1
(AC034136) Homo sapiens chromosome 6 clone CTD-2009I24, WORK... 44 8.6 1
(CT025747) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 8.6 1
(CR790387) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 8.6 1
(AL645523) Human DNA sequence *** SEQUENCING CANCELLED *** f... 44 8.6 1
(AC218697) Bos taurus clone CH240-297A20, WORKING DRAFT SEQU... 44 8.6 1
(AC218268) Bos taurus clone CH240-289C21, WORKING DRAFT SEQU... 44 8.6 1
(AC193404) Zea mays chromosome 10 clone ZMMBBb-132I6; ZMMBBb... 44 8.6 1
(AC170618) Bos taurus clone CH240-257O22, WORKING DRAFT SEQU... 44 8.6 1
(AC021095) Homo sapiens chromosome 15 clone RP11-408F10, WOR... 44 8.6 1
(AC011827) Homo sapiens chromosome 15 clone RP11-57H1 map 15... 44 8.6 1
(BH292152) CH230-91O24.TVB CHORI-230 Segment 1 Rattus norveg... 44 8.6 1
(BH132981) ENTNL23TR Entamoeba histolytica Sheared DNA Entam... 44 8.6 1
(BH006667) BMBAC11J07SP6_PSU Brugia malayi Genomic Bac Libra... 44 8.6 1
(BH001899) BMBAC01M05T7_PSU Brugia malayi Genomic Bac Librar... 44 8.6 1
(FT109325) Rattus norvegicus DNA, BAC clone: RNB2-283E15, 5'... 44 8.6 1
(FT074147) Rattus norvegicus DNA, BAC clone: RNB2-234M03, 5'... 44 8.6 1
(AQ625033) CITBI-E1-2649N9.TF CITBI-E1 Homo sapiens genomic ... 44 8.6 1
(EI440899) PV_GBa0036J12.f PV_GBa Phaseolus vulgaris genomic... 44 8.6 1
(EI417597) PV_GBa0003O01.r PV_GBa Phaseolus vulgaris genomic... 44 8.6 1
(AL446746) Paramecium tetraurelia sequence M22C05u of the en... 44 8.6 1
(CU741925) A BAC library has been constructed from PN40024 g... 44 8.6 1
(CG138327) PUILS79TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 44 8.6 1
(CG063682) PUIEE49TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 44 8.6 1
(CE549326) tigr-gss-dog-17000312255776 Dog Library Canis lup... 44 8.6 1
(CE455945) tigr-gss-dog-17000319539033 Dog Library Canis lup... 44 8.6 1
(CC306096) CH261-98J20_RM1.1 CH261 Gallus gallus genomic clo... 44 8.6 1
(BZ099692) CH230-142P21.TJB CHORI-230 Segment 1 Rattus norve... 44 8.6 1
(DV677690) CGN-15164 Pericarp Coffea canephora cDNA clone cc... 44 8.6 1
(DV672399) CGN-7995 Pericarp Coffea canephora cDNA clone ccc... 44 8.6 1
(DV665637) CGN-3214 Pericarp Coffea canephora cDNA clone ccc... 44 8.6 1
(DV360526) NACAC81TFB Aedes aegypti infected with Brugia Mal... 44 8.6 1
(DV355753) NABY981TF Aedes aegypti infected with Brugia Mala... 44 8.6 1
(DV265148) AEDBS35TF Aedes re-sequencing Aedes aegypti cDNA ... 44 8.6 1
(CN510433) AGENCOURT_22407535 NIH_ZGC_9 Danio rerio cDNA clo... 44 8.6 1
(BX865761) AGENAE Rainbow trout multi-tissues - normalized +... 44 8.6 1
(CP001037) Nostoc punctiforme PCC 73102, complete genome. 44 8.6 1
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 44 8.6 1
(AF222894) Ureaplasma parvum serovar 3 str. ATCC 700970, com... 44 8.6 1
(AM473910) Vitis vinifera contig VV78X080274.7, whole genome... 36 9.0 3
(AM465548) Vitis vinifera contig VV78X059809.26, whole genom... 38 9.9 4
>(C94467) Dictyostelium discoideum slug cDNA, clone SSL137.
Length = 632
Score = 365 bits (184), Expect(3) = e-132
Identities = 184/184 (100%)
Strand = Plus / Plus
Query: 174 attatcatttttaccaaattcaacacaaattttaaaagaaggttggttttgttcaacaaa 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attatcatttttaccaaattcaacacaaattttaaaagaaggttggttttgttcaacaaa 60
Query: 234 attctcacatcaaacaacatcattattatatttattaaaacaaattcataataaagttga 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attctcacatcaaacaacatcattattatatttattaaaacaaattcataataaagttga 120
Query: 294 tgatagggtaattgaaatcattaaatcattagatattttaaaatttttaaaagattggat 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgatagggtaattgaaatcattaaatcattagatattttaaaatttttaaaagattggat 180
Query: 354 aacc 357
||||
Sbjct: 181 aacc 184
Score = 127 bits (64), Expect(3) = e-132
Identities = 64/64 (100%)
Strand = Plus / Plus
Query: 719 cacattgggaattattagaaattattgaaccaattgtatcaaataggtattggattaatc 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 cacattgggaattattagaaattattgaaccaattgtatcaaataggtattggattaatc 605
Query: 779 gtag 782
||||
Sbjct: 606 gtag 609
Score = 44.1 bits (22), Expect(3) = e-132
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 527 cacattttgaaatccaattgcc 548
||||||||||||||||||||||
Sbjct: 354 cacattttgaaatccaattgcc 375
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 495,120,930
Number of extensions: 37319227
Number of successful extensions: 3852209
Number of sequences better than 10.0: 213
Length of query: 804
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 780
Effective length of database: 104,103,628,548
Effective search space: 81200830267440
Effective search space used: 81200830267440
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home