Dictyostelium discoideum cDNA Contig-U09369-1

Assembled

Chromosomal Location of Contig-U09369-1

Sequence Contig-U09369-1

CGAAATTAAC AGCACATGCA ACAGGAGTTT ATTTAAAACA TTGGAATTTT
GATCCAATTG TTTATAGTTC AACAAGTACA GGTCATTTTA ATATGGATAG
ATATTATGAG AGTACTGGTA TGGTTAAGTT TATAGATCAA ATTCAACATG
CATGGAAATT GGATATTGCA ATCAATCATT CACCATTAAT CTATATGAAT
AGAAATAGAG CATGTAGAAT TTGGATTGAA AAAGATACTG TATTCATAAA
ACAAAAATTT AATCAATATT TTAACAACTA TGAAATGTGT CCTGTTGATT
TCGAAGATTT AATATT---- ------GATG GTTCAAAACA AAATGTTTCA
AATTATGGTA ATAGAAATCC TTCATCATCA ACTAATGATT CTTTTAATTT
TTTAAATTCA AACAATCAAA GTTATTATTA TAATCCACAT AATTTACAAG
AGAATCAAGA GAATCAGTTT CAAAATAATA TAAATTATAA TGGTAATGGT
AATAGACATC CAATTAATCA TGGTAAATTA AATTTTTTAC AATTGTATGC
ATGTTATACT AATGAAACTC CAATGGATGG TGGTATTAAT TTATTTCATG
AACTTTTAAA ATTTGTACAC AATGATTGTT TAAAACATAA AGTTGATTAC
TTATTCATTG GTTTGGCTAA AACTGATCCA ATTGAAACTC AATTTCCATT
GTTACCAGGT ATTAAAAGTT TAAATTTTAC TCTTCATTTT TGTATGGGTA
ATCTTGATAA ATCTTTACGT GAAAAAATTT CAACTCGTCC TTTCTTTCAA
GATCCAAGAG ATTATGGTAT AGTTATGTTT CATTCAACAG ATCCAAATAA
ACATGAACCA TTATTATCAA ATTCTCCAAT TTCTTCAAAA CTTTGAAAGA
ATTTATTAAA TCAAAAAAAG AACTTGTAGT TTTATATA

Translated Amino Acid Sequence Contig-U09369-1

KLTAHATGVYLKHWNFDPIVYSSTSTGHFNMDRYYESTGMVKFIDQIQHAWKLDIAINHS
PLIYMNRNRACRIWIEKDTVFIKQKFNQYFNNYEMCPVDFEDLI---

---DGSKQNVSNYGNRNPSSSTNDSFNFLNSNNQSYYYNPHNLQENQENQFQNNINYNGN
GNRHPINHGKLNFLQLYACYTNETPMDGGINLFHELLKFVHNDCLKHKVDYLFIGLAKTD
PIETQFPLLPGIKSLNFTLHFCMGNLDKSLREKISTRPFFQDPRDYGIVMFHSTDPNKHE
PLLSNSPISSKL*knllnqkknl*fyi

Homology Contig-U09369-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U09369-1 (Contig-U09369-1Q) /CSM_Contig/Conti...  1758  0.0
Contig-U09122-1 (Contig-U09122-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U05633-1 (Contig-U05633-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U13909-1 (Contig-U13909-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U14877-1 (Contig-U14877-1Q) /CSM_Contig/Conti...    38  0.017
Contig-U12660-1 (Contig-U12660-1Q) /CSM_Contig/Conti...    38  0.017
Contig-U11881-1 (Contig-U11881-1Q) /CSM_Contig/Conti...    38  0.017
Contig-U06616-1 (Contig-U06616-1Q) /CSM_Contig/Conti...    38  0.017
Contig-U04510-1 (Contig-U04510-1Q) /CSM_Contig/Conti...    38  0.017
Contig-U14191-1 (Contig-U14191-1Q) /CSM_Contig/Conti...    36  0.066

Homology Contig-U09369-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU037824) Dictyostelium discoideum slug cDNA, clone SSE339.     1160   0.0    2
(AU072373) Dictyostelium discoideum slug cDNA, clone SSE339.      476   e-130  1
(DX511362) 643_4_14167437_5489_43566_039 Arachis duranensis ...    36   1e-05  4
(CU914152) Blastocystis hominis mitochondria-like organelle ...    42   2e-04  9
(CX587039) TTE00027084 Amplicon Express - Conjugative Form T...    36   0.001  3
(AC144929) Medicago truncatula clone mth2-28b22, WORKING DRA...    38   0.004  9
(AY613856) Oikopleura dioica clone BACOIKO008 5xo15, complet...    44   0.007  6
(AF152087) Anastrepha spatulata 16S ribosomal RNA gene, part...    36   0.071  4
(AC235892) Glycine max strain Williams 82 clone GM_WBc0089E0...    34   0.092  8
(DX511761) 643_6_14174406_16654_43641_038 Arachis duranensis...    30   0.12   4

Homology Contig-U09369-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AP006852_275(AP006852|pid:none) Candida albicans genomic DNA, ch...    39   0.33
AL031745_47(AL031745|pid:none) Plasmodium falciparum DNA from MA...    37   0.74
AL034558_21(AL034558|pid:none) Plasmodium falciparum MAL3P2, com...    37   0.96
AJ250310_7(AJ250310|pid:none) Candida albicans cyr1 gene (partia...    36   1.6
AC116986_56(AC116986|pid:none) Dictyostelium discoideum chromoso...    36   2.1
CR940347_914(CR940347|pid:none) Theileria annulata strain Ankara...    36   2.1
AY483222_1(AY483222|pid:none) Koeberlinia spinosa maturase K (ma...    35   2.8
AC115599_3(AC115599|pid:none) Dictyostelium discoideum chromosom...    35   2.8
AC114261_1(AC114261|pid:none) Dictyostelium discoideum chromosom...    35   3.7
AL844506_261(AL844506|pid:none) Plasmodium falciparum 3D7 chromo...    35   3.7