Homology Contig-U09359-1 vs Protein
Query= Contig-U09359-1 (Contig-U09359-1Q) /CSM_Contig/Contig-U09359-1Q.Seq.d
(454 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC117076_28(AC117076|pid:none) Dictyostelium discoideum chromoso... 33 2.4
>AC117076_28(AC117076|pid:none) Dictyostelium discoideum chromosome
2 map 3323568-3470138 strain AX4, complete sequence.
Length = 405
Score = 33.5 bits (75), Expect = 2.4
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +2
Query: 14 ISDRPHKKQRLNIKFNMPLDNKVQLXXXXXXXXXXXXXXXDLKIQDNHNNKEPF--FNRS 187
I ++ K Q+ NI N L+ ++ L +LKIQDN+NN F +
Sbjct: 142 IVEKLFKNQQYNIDLNNTLNQQINLQKE------------NLKIQDNNNNNNNFEILKKY 189
Query: 188 ELVRLLIQSLNSLGYDKS 241
+L+ LL+ S + +++S
Sbjct: 190 QLLNLLLNSKENYNFEES 207
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 392,768,766
Number of extensions: 4299975
Number of successful extensions: 6551
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6551
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 1,040,966,779
Length adjustment: 113
Effective length of query: 38
Effective length of database: 678,882,574
Effective search space: 25797537812
Effective search space used: 25797537812
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)
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