Homology Contig-U09359-1 vs Protein

Query= Contig-U09359-1 (Contig-U09359-1Q) /CSM_Contig/Contig-U09359-1Q.Seq.d
         (454 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC117076_28(AC117076|pid:none) Dictyostelium discoideum chromoso...    33   2.4

>AC117076_28(AC117076|pid:none) Dictyostelium discoideum chromosome
           2 map 3323568-3470138 strain AX4, complete sequence.
          Length = 405

 Score = 33.5 bits (75), Expect = 2.4
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
 Frame = +2

Query: 14  ISDRPHKKQRLNIKFNMPLDNKVQLXXXXXXXXXXXXXXXDLKIQDNHNNKEPF--FNRS 187
           I ++  K Q+ NI  N  L+ ++ L               +LKIQDN+NN   F    +
Sbjct: 142 IVEKLFKNQQYNIDLNNTLNQQINLQKE------------NLKIQDNNNNNNNFEILKKY 189

Query: 188 ELVRLLIQSLNSLGYDKS 241
           +L+ LL+ S  +  +++S
Sbjct: 190 QLLNLLLNSKENYNFEES 207

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 392,768,766
Number of extensions: 4299975
Number of successful extensions: 6551
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6551
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 1,040,966,779
Length adjustment: 113
Effective length of query: 38
Effective length of database: 678,882,574
Effective search space: 25797537812
Effective search space used: 25797537812
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)




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