Homology Contig-U09359-1 vs DNA
Query= Contig-U09359-1 (Contig-U09359-1Q) /CSM_Contig/Contig-U09359-1Q.Seq.d
(454 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU072319) Dictyostelium discoideum slug cDNA, clone SSE181. 212 9e-88 2
(AU037694) Dictyostelium discoideum slug cDNA, clone SSE181. 242 1e-59 1
(GR585236) CCAA3063.b1 CCAA Dictyostelium purpureum 0 hr sta... 56 8e-30 4
(EK121528) 1092963535471 Global-Ocean-Sampling_GS-31-01-01-1... 42 0.14 2
(AE017243) Mycoplasma hyopneumoniae J, complete genome. 36 0.21 9
(BF275807) GA__Eb0025D24f Gossypium arboreum 7-10 dpa fiber ... 48 0.30 1
(DE245551) Trifolium pratense DNA, clone:RC0516f.ab1. 36 0.46 2
(AE017244) Mycoplasma hyopneumoniae 7448, complete genome. 36 0.70 9
(FH024986) CHO_OF3249xc06f1.ab1 CHO_OF3 Nicotiana tabacum ge... 36 0.78 2
(AC209162) Zea mays chromosome 5 clone CH201-300P12; ZMMBBc0... 46 1.2 1
(AC185431) Zea mays chromosome 5 clone CH201-476H21; ZMMBBc0... 46 1.2 1
(AC184618) Strongylocentrotus purpuratus clone R3-3074F1, WO... 46 1.2 1
(AC178152) Strongylocentrotus purpuratus clone R3-3078P23, W... 46 1.2 1
(DY893884) CeleSEQ13341 Cunninghamella elegans pBluescript (... 46 1.2 1
(AX144832) Sequence 3554 from Patent WO0134809. 34 1.3 3
(AR485468) Sequence 3554 from patent US 6703492. 34 1.3 3
(AF269512) Staphylococcus epidermidis strain SR1 clone step.... 34 1.3 3
(DD391858) Method and nucleic acids for the improved treatme... 42 2.1 2
(DD391584) Method and nucleic acids for the improved treatme... 42 2.1 2
(DD210929) Method and nucleic acids for the analysis of colo... 42 2.1 2
(DD210919) Method and nucleic acids for the analysis of colo... 42 2.1 2
(DD209213) test. 42 2.1 2
(DD209085) test. 42 2.1 2
(CS250597) Sequence 141 from Patent WO2005123945. 42 2.1 2
(CS250515) Sequence 59 from Patent WO2005123945. 42 2.1 2
(CQ807114) Sequence 564 from Patent WO2004035803. 42 2.1 2
(CQ806840) Sequence 290 from Patent WO2004035803. 42 2.1 2
(AX826050) Sequence 302 from Patent WO03072821. 42 2.1 2
(AX825922) Sequence 174 from Patent WO03072821. 42 2.1 2
(AX825611) Sequence 19 from Patent WO03072820. 42 2.1 2
(AX825601) Sequence 9 from Patent WO03072820. 42 2.1 2
(AX822410) Sequence 302 from Patent EP1340818. 42 2.1 2
(AX822282) Sequence 174 from Patent EP1340818. 42 2.1 2
(AX795894) Sequence 237 from Patent WO03052135. 42 2.1 2
(AX795778) Sequence 121 from Patent WO03052135. 42 2.1 2
(AC013475) Homo sapiens BAC clone RP11-525B5 from 2, complet... 36 3.0 4
(DB733074) Apis mellifera head cDNA, RIKEN full-length enric... 36 3.9 2
(DB731271) Apis mellifera head cDNA, RIKEN full-length enric... 36 4.0 2
(AL450321) Mouse DNA sequence from clone RP23-232M10 on chro... 44 4.7 1
(AM452883) Vitis vinifera, whole genome shotgun sequence, co... 44 4.7 1
(GC826535) Sequence 141780 from patent US 6812339. 44 4.7 1
(GC826534) Sequence 141779 from patent US 6812339. 44 4.7 1
(GC826533) Sequence 141778 from patent US 6812339. 44 4.7 1
(GC700509) Sequence 15754 from patent US 6812339. 44 4.7 1
(GC697170) Sequence 12415 from patent US 6812339. 44 4.7 1
(AB222209) Tetrahymena thermophila MYO4 mRNA for myosin 4, c... 44 4.7 1
(AL390029) Human DNA sequence from clone RP11-560N15 on chro... 44 4.7 1
(CT827854) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 4.7 1
(CT737375) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 4.7 1
(AC200201) Zea mays chromosome unknown clone CH201-282A18; Z... 44 4.7 1
(AC183900) Zea mays chromosome 2 clone CH201-128L5; ZMMBBc01... 44 4.7 1
(FH375923) CHO_OF4577xi03r1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 4.7 1
(EK066178) 1092960126932 Global-Ocean-Sampling_GS-31-01-01-1... 44 4.7 1
(EJ267790) 1095351026637 Global-Ocean-Sampling_GS-27-01-01-1... 44 4.7 1
(DU687664) Bst020200 lambda03 Boechera stricta genomic clone... 44 4.7 1
(CU829770) A BAC library has been constructed from PN40024 g... 44 4.7 1
(CU801245) A BAC library has been constructed from PN40024 g... 44 4.7 1
(CU800236) A BAC library has been constructed from PN40024 g... 44 4.7 1
(CU788790) A BAC library has been constructed from PN40024 g... 44 4.7 1
(DN337242) LIB3187-031-P1-K1-C4 LIB3187 Canis lupus familiar... 44 4.7 1
(CX582792) TTE00034509 Amplicon Express - Conjugative Form T... 44 4.7 1
(GD197139) G1045P382FK19.T1 Aplysia californica Pooled Norma... 44 4.7 1
(FG088943) CMRC-FF-IH0-acm-c-22-0-CMRC.r1 Ceratitis capitata... 36 5.1 2
(AL972471) Xenopus tropicalis EST, clone TGas130e21 5'. 34 5.4 2
(DX460068) Cpl01725 Papaya Genomic DNA BAC Library Carica pa... 34 5.8 2
(EJ763204) 1092963154361 Global-Ocean-Sampling_GS-30-02-01-1... 40 6.6 2
(EJ771168) 1092966609575 Global-Ocean-Sampling_GS-30-02-01-1... 38 6.7 2
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 36 7.6 8
(DU009005) 240723 Tomato MboI BAC Library Solanum lycopersic... 40 8.0 2
(CT737274) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 8.1 4
(AG331976) Mus musculus molossinus DNA, clone:MSMg01-122A01.... 40 8.2 2
(EJ752586) 1092963046632 Global-Ocean-Sampling_GS-30-02-01-1... 40 8.2 2
(CT737163) Zebrafish DNA sequence from clone DKEYP-3G2 in li... 32 8.6 2
(BX255939) Zebrafish DNA sequence from clone DKEY-5G7 in lin... 32 8.7 2
(CT737154) Zebrafish DNA sequence from clone DKEY-168A14 in ... 32 8.7 2
>(AU072319) Dictyostelium discoideum slug cDNA, clone SSE181.
Length = 240
Score = 212 bits (107), Expect(2) = 9e-88
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 1 aactaatcatccaatatcagatagaccacataaaaaacaaagattaaatataaaattcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aactaatcatccaatatcagatagaccacataaaaaacaaagattaaatataaaattcaa 60
Query: 61 tatgcctctagataataaagtacaattaaatgagaatggaaaagaag 107
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tatgcctctagataataaagtacaattaaatgagaatggaaaagaag 107
Score = 147 bits (74), Expect(2) = 9e-88
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 167 gaaccattctttaatagaagtgaattagttagacttttaatacaatcattaaatagttta 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 gaaccattctttaatagaagtgaattagttagacttttaatacaatcattaaatagttta 226
Query: 227 ggttatgataaatc 240
||||||||||||||
Sbjct: 227 ggttatgataaatc 240
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 457,527,335
Number of extensions: 29865091
Number of successful extensions: 2406829
Number of sequences better than 10.0: 75
Length of query: 454
Length of database: 106,710,029,556
Length adjustment: 23
Effective length of query: 431
Effective length of database: 104,212,228,590
Effective search space: 44915470522290
Effective search space used: 44915470522290
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
Dictyostelium discoideum cDNA Project Home