Homology Contig-U09332-1 vs Protein

Query= Contig-U09332-1 (Contig-U09332-1Q) /CSM_Contig/Contig-U09332-1Q.Seq.d
         (853 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC115607_10(AC115607|pid:none) Dictyostelium discoideum chromoso...   122   1e-26

>AC115607_10(AC115607|pid:none) Dictyostelium discoideum chromosome
           2 map 4559693-4624405 strain AX4, complete sequence.
          Length = 259

 Score =  122 bits (307), Expect = 1e-26
 Identities = 72/146 (49%), Positives = 76/146 (52%)
 Frame = +2

Query: 113 NDFNYNNKIKNESDLHNFYXXXXXXXXXXXXXXXXXXXXXXDEKRTSNENIPILKKYESP 292
           N+ N NN   N ++ +N                        DEKRTSNENIPILKKYESP
Sbjct: 86  NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNYNDEKRTSNENIPILKKYESP 145

Query: 293 IKFSESXXXXXXXXXXXXXXXXXXXXXXXXNPVNSXXXXXXXXXXXXXXXQQSRVEPKSR 472
           IKFSES                        NPVNS               QQSRVEPKSR
Sbjct: 146 IKFSESQLLQLEQQLRQQQQIDYQQTEQIQNPVNSTTTTTTTTTTTTTTTQQSRVEPKSR 205

Query: 473 KKPYIRRAPRQKITFKYVPSHLLDQH 550
           KKPYIRRAPRQKITFKYVPSHLLDQH
Sbjct: 206 KKPYIRRAPRQKITFKYVPSHLLDQH 231

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 662,579,686
Number of extensions: 7218530
Number of successful extensions: 16953
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16950
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 1,040,966,779
Length adjustment: 127
Effective length of query: 157
Effective length of database: 634,022,584
Effective search space: 99541545688
Effective search space used: 99541545688
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)




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