<Clone: Contig-U09320-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U09320-1

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Assembled

Chromosomal Location of Contig-U09320-1

< more Chromosomal info >

Chromosome Number 4
Length 5430582
Start Poin 5,361,251
End Point 5,360,253
Strand MINUS

Sequence Contig-U09320-1

GTTGGTATCA TTGGTTATCC AAATGTTGGT AAATCATCTT TAATCAACTC
TTTGAAACGT ACTCGTTCCG TTGGTGTTGG TGCAACTCCT GGTTTCACAA
AGTTTGCTCA AGAGGTTCAT TTGGATAAGA ATGTCAAGCT ATTGGATTCA
CCAGGTATCG TACCAATTAA AGGAAATGTC GATGAGAATA TCATTCTTCG
TAATGTTGTC AAATTGGAGA AAGTTTTAGA TCCAATCGCA CCAGTTGATG
CTATCCTTTC ACGTTGTTCT CAAAAACAAA TTTTAGATAT CTATGAAATC
GCTCAATATC AATCAACCAC TGATTTCTTA ACTCAAGTTG CTGCTAAACG
TAAGAAAATC GTTAAAGGTG GTATCGCTGA TTTACGTTCT ACCGCCATTA
GTGTCATTCG TGATTGGACT GGTGGTAAAA TTCCTTTCTA TACTCAACCA
CCAAAAGTTT TAGTTAAATC AACTTTACTT TCACAATTCT CTGATGAATT
AAATATTGAT CAATCTGATT TAATTTCAAC TGTTTCAAAT CAAAATACTT
CATTTGCTT- ---------G ATTCGGATTC TGACGCATTC CTTANNTATC
ACCACCAAAA CCAGGTGGTT AANGCCCCGG CTAACCAGGT TGCTCAATTT
TATTCAAATT CTCAAAATCT TAGGGTTGAC CTGCTCAATT CACTCCCCAN
NGTGATACCC AATTGAACAC CCAAAATAAA ACCCTTAAAA AGAAATTTGG
TATTGTTTCA ACTTCATCTA AACAAGTGCA AGATGATGAT GATGAAGATG
ACGATGATGA CCAAGAAGAA ATTGATCAAG ATGATGAAGA TGATGAAGAT
ATTGATGAAG ATGAAGCTTT TTAATTTAAT TAAATAATAT AAAAAAAAAA
AATAAAAAAT AAAAATAAAA AAAAAAAATA AAAAAAAAAA ACAAAAAAAA
AATAATAAAA AGTAAAAGTA GGTAATTCTC CTTTATAAAT CAAATTAAAG
AGGTAA

Translated Amino Acid Sequence Contig-U09320-1

<All Frames> 
VGIIGYPNVGKSSLINSLKRTRSVGVGATPGFTKFAQEVHLDKNVKLLDSPGIVPIKGNV
DENIILRNVVKLEKVLDPIAPVDAILSRCSQKQILDIYEIAQYQSTTDFLTQVAAKRKKI
VKGGIADLRSTAISVIRDWTGGKIPFYTQPPKVLVKSTLLSQFSDELNIDQSDLISTVSN
QNTSFA---

---DSDSDAFLXYHHQNQVVXAPANQVAQFYSNSQNLRVDLLNSLPXVIPN*tpkikplk
rnlvlfqlhlnkckmmmmkmtmmtkkklikmmkmmkilmkmklfnlik*ykkkk*kikik
kknkkkkqkknnkk*k*villyksn*rg


Homology Contig-U09320-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U09320-1 (Contig-U09320-1Q) /CSM_Contig/Conti...  1459  0.0
Contig-U13962-1 (Contig-U13962-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U11722-1 (Contig-U11722-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U12047-1 (Contig-U12047-1Q) /CSM_Contig/Conti...    38  0.018
Contig-U12506-1 (Contig-U12506-1Q) /CSM_Contig/Conti...    36  0.071
Contig-U11488-1 (Contig-U11488-1Q) /CSM_Contig/Conti...    36  0.071
Contig-U10114-1 (Contig-U10114-1Q) /CSM_Contig/Conti...    36  0.071
Contig-U09209-1 (Contig-U09209-1Q) /CSM_Contig/Conti...    36  0.071
Contig-U08800-1 (Contig-U08800-1Q) /CSM_Contig/Conti...    36  0.071
Contig-U06507-1 (Contig-U06507-1Q) /CSM_Contig/Conti...    36  0.071


Homology Contig-U09320-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(AU071725) Dictyostelium discoideum slug cDNA, clone SSC381.      476   e-130  1
(C84159) Dictyostelium discoideum slug cDNA, clone SSC381.        385   e-125  3
(FE242969) CAPG742.rev CAPG Naegleria gruberi amoeba stage N...    48   1e-05  3
(FN357697) Schistosoma mansoni genome sequence supercontig S...    58   7e-04  1
(AI975898) EST270492 Schistosoma mansoni female, Phil LoVerd...    58   7e-04  1
(CD165774) ML1-0099T-M305-D12-U.G ML1-0099 Schistosoma manso...    58   7e-04  1
(CD136669) MG1-0046U-A225-E04-U.B MG1-0046 Schistosoma manso...    58   7e-04  1
(CD083443) MA3-9999U-V239-H04-U.B MA3-0001 Schistosoma manso...    58   7e-04  1
(BF936844) EST459899 Schistosoma mansoni female, Phil LoVerd...    58   7e-04  1
(EY106500) CAZI4775.fwd CAZI Artemisia annua normalized leaf...    58   7e-04  1


Homology Contig-U09320-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


(Q54KS4) RecName: Full=Guanine nucleotide-binding protein-like 3...   361   2e-98
BC078411_1(BC078411|pid:none) Danio rerio guanine nucleotide bin...   174   6e-42
AY054687_1(AY054687|pid:none) Arabidopsis thaliana putative GTPa...   173   1e-41
AC016827_20(AC016827|pid:none) Arabidopsis thaliana chromosome I...   173   1e-41
BT066214_1(BT066214|pid:none) Zea mays full-length cDNA clone ZM...   170   8e-41
DQ304482_1(DQ304482|pid:none) Solanum lycopersicum putative nucl...   169   1e-40
BT067162_1(BT067162|pid:none) Zea mays full-length cDNA clone ZM...   164   6e-39
EU975845_1(EU975845|pid:none) Zea mays clone 502886 guanine nucl...   163   1e-38
(Q9NVN8) RecName: Full=Guanine nucleotide-binding protein-like 3...   159   1e-37
BC003603_1(BC003603|pid:none) Homo sapiens guanine nucleotide bi...   159   1e-37


<Clone: Contig-U09320-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Project Home