Homology Contig-U09284-1 vs DNA
Query= Contig-U09284-1 (Contig-U09284-1Q) /CSM_Contig/Contig-U09284-1Q.Seq.d
(790 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(C25617) Dictyostelium discoideum slug cDNA, clone SSA284. 765 0.0 1
(AU075117) Dictyostelium discoideum slug cDNA, clone SSA284. 476 e-130 1
(AR549920) Sequence 5051 from patent US 6747137. 58 1e-09 3
(BZ400435) EINBP44TF EI_10_12_KB Entamoeba invadens genomic ... 52 0.035 1
(L76303) Borrelia burgdorferi ftsA gene, 3' end of cds, ftsZ... 44 0.052 3
(AC194568) Pan troglodytes BAC clone CH251-57L13 from chromo... 38 0.083 3
(AC211087) Solanum lycopersicum chromosome 6 clone C06SLm013... 34 0.084 2
(AC211059) Solanum lycopersicum chromosome 6 clone C06HBa017... 34 0.086 2
(CP001205) Borrelia burgdorferi ZS7, complete genome. 44 0.13 13
(AM443855) Vitis vinifera contig VV78X170858.6, whole genome... 50 0.14 1
(BX682549) Zebrafish DNA sequence from clone CH211-193L17 in... 40 0.17 6
(CR936346) Mouse DNA sequence *** SEQUENCING CANCELLED *** f... 40 0.21 5
(DD000793) PLANT ARTIFICIAL CHROMOSOME COMPOSITIONS AND METH... 46 0.31 3
(AX059478) Sequence 211 from Patent WO0055325. 46 0.31 3
(DX400535) GH__Sa0038G12.b1 Gossypium herbaceum WGS library ... 36 0.40 2
(EK334592) 1095467035846 Global-Ocean-Sampling_GS-31-01-01-1... 36 0.49 3
(BV032255) S212P60435FG8.T0 CZECHII/Ei Mus musculus STS geno... 48 0.54 1
(AC160984) Mus musculus BAC clone RP23-260C12 from chromosom... 48 0.54 1
(AC154333) Mus musculus BAC clone RP24-496M21 from 14, compl... 48 0.54 1
(AM461262) Vitis vinifera contig VV78X141844.2, whole genome... 48 0.54 1
(BZ398585) EINDT01TR EI_10_12_KB Entamoeba invadens genomic ... 48 0.54 1
(BP508182) Hydra magnipapillata cDNA, clone:hmp_02082. 48 0.54 1
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome. 36 0.76 11
(AC154045) Drosophila melanogaster clone BACR34K23, complete... 44 0.92 3
(AE000783) Borrelia burgdorferi B31, complete genome. 36 0.94 13
(AC112728) Drosophila melanogaster clone RP98-35A19, WORKING... 44 1.1 4
(AC222323) Bos taurus clone CH240-415B5, WORKING DRAFT SEQUE... 42 1.1 3
(AC165097) Bos taurus clone CH240-159M3, WORKING DRAFT SEQUE... 36 1.1 7
(AC103917) Drosophila melanogaster clone RP98-34K23, WORKING... 44 1.1 3
(DU381527) 1098313038359 CHORI-243 Ovis aries genomic clone ... 40 1.3 2
(AL138645) Arabidopsis thaliana DNA chromosome 3, BAC clone ... 46 1.3 3
(AR777041) Sequence 196 from patent US 6972197. 46 1.3 3
(AL391600) Human DNA sequence from clone RP11-210L5 on chrom... 40 1.6 4
(EJ475327) 1095403439128 Global-Ocean-Sampling_GS-28-01-01-1... 38 1.7 2
(AE017244) Mycoplasma hyopneumoniae 7448, complete genome. 32 1.8 16
(AC163140) Bos taurus clone CH240-80C17, WORKING DRAFT SEQUE... 38 1.9 4
(EJ612267) 1092962052780 Global-Ocean-Sampling_GS-29-01-01-1... 32 2.1 3
(AC191638) Gallus gallus BAC clone CH261-41E19 from chromoso... 46 2.1 1
(AC166340) Mus musculus chromosome 1, clone RP24-234I17, com... 46 2.1 1
(AC124235) Mus musculus chromosome 13, clone RP23-273G24, co... 46 2.1 1
(AP010814) Solanum lycopersicum DNA, chromosome 8, clone: C0... 46 2.1 1
(AC131578) Mus musculus chromosome 13 clone RP23-37L15 map 1... 46 2.1 1
(AC200624) Zea mays chromosome 4 clone CH201-125C10; ZMMBBc0... 46 2.1 1
(AC194876) Zea mays chromosome 4 clone CH201-273H6; ZMMBBc02... 46 2.1 1
(AC166979) Mus musculus chromosome 1 clone RP23-213C16 map 1... 46 2.1 1
(GS326311) LuSp082G03_1061063884139_TV POTATO-B-01-100-110KB... 46 2.1 1
(ER537543) 1093015874847 Global-Ocean-Sampling_GS-35-01-01-1... 46 2.1 1
(DE908878) Macropus eugenii DNA, BAC clone: MEB1-091J20_F, 5... 46 2.1 1
(BZ787155) PUFCV43TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 46 2.1 1
(AM463318) Vitis vinifera, whole genome shotgun sequence, co... 38 2.4 3
(FH310696) CHO_OF4256xj02r2.ab1 CHO_OF4 Nicotiana tabacum ge... 42 2.4 2
(AC171937) Bos taurus clone CH240-274P21, WORKING DRAFT SEQU... 38 2.8 5
(AC125209) Mus musculus chromosome UNKNOWN clone RP23-185N21... 40 3.0 5
(AF008210) Buchnera aphidicola genomic fragment containing (... 38 3.4 4
(AC154451) Mus musculus BAC clone RP24-171K15 from chromosom... 40 3.6 5
(AC151627) Otolemur garnettii clone CH256-557L18, WORKING DR... 36 3.9 6
(CU104677) CH251-551O18, complete sequence. 32 4.1 2
(AC176780) Strongylocentrotus purpuratus clone R3-3104O19, W... 34 4.1 2
(AC180648) Strongylocentrotus purpuratus clone R3-3090E10, W... 34 4.1 2
(AC200954) Strongylocentrotus purpuratus clone R3-1106J18, W... 34 4.2 2
(EU851554) Heriades punctulifer elongation factor-1 alpha ge... 34 5.3 2
(EK047256) 1092959638297 Global-Ocean-Sampling_GS-31-01-01-1... 32 5.3 3
(AE014187) Plasmodium falciparum 3D7 chromosome 14, complete... 38 5.4 18
(CW943590) TcB25.2_H02_SP6 Tribolium BAC library Tribolium c... 32 5.5 2
(ER569086) 1093015783497 Global-Ocean-Sampling_GS-36-01-01-2... 34 5.5 2
(AL110484) Caenorhabditis elegans YAC Y38E10A. 34 5.5 4
(AL132952) Caenorhabditis elegans YAC Y51H4A. 34 5.5 5
(EK427918) 1095516049553 Global-Ocean-Sampling_GS-31-01-01-1... 40 5.6 2
(CG821009) SOYDW21TH LargeInsertSoybeanGenLib Glycine max ge... 38 6.1 2
(EJ001169) 1091120778353 Global-Ocean-Sampling_GS-26-01-01-1... 40 6.4 2
(AC212916) Pan troglodytes BAC clone CH251-593E24 from chrom... 38 6.8 5
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 32 6.9 8
(EK463000) 1095469401862 Global-Ocean-Sampling_GS-32-01-01-1... 30 7.5 3
(FE473421) CAOS4468.rev CAOS Selaginella moellendorffii mixe... 36 8.0 2
(CT027614) Zebrafish DNA sequence from clone DKEY-189P14 in ... 44 8.4 1
(BX255912) Zebrafish DNA sequence from clone CH211-267H23 in... 44 8.4 1
(AC132237) Mus musculus BAC clone RP24-501M9 from chromosome... 44 8.4 1
(AC124926) Rattus norvegicus X BAC CH230-155H3 (Children's H... 44 8.4 1
(AC098982) Rattus norvegicus BAC CH230-46O20 (Children's Ho... 44 8.4 1
(AM479159) Vitis vinifera contig VV78X008692.6, whole genome... 44 8.4 1
(FJ405734) Viviparus ater voucher Vivi.ater.1 16S ribosomal ... 44 8.4 1
(EU477786) Leptusa opaca 16S ribosomal RNA gene, partial seq... 44 8.4 1
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 44 8.4 1
(AC119520) Rattus norvegicus clone CH230-139M13, *** SEQUENC... 44 8.4 1
(AC118909) Rattus norvegicus clone CH230-33J18, *** SEQUENCI... 44 8.4 1
(AC113159) Rattus norvegicus clone RP32-499P2, *** SEQUENCIN... 44 8.4 1
(AC112088) Rattus norvegicus clone CH230-263A20, *** SEQUENC... 44 8.4 1
(AC111474) Rattus norvegicus clone CH230-83A12, *** SEQUENCI... 44 8.4 1
(AC110363) Rattus norvegicus clone CH230-17A22, *** SEQUENCI... 44 8.4 1
(AC109870) Rattus norvegicus clone CH230-295F24, *** SEQUENC... 44 8.4 1
(AC108229) Rattus norvegicus clone CH230-7M17, WORKING DRAFT... 44 8.4 1
(AC096451) Rattus norvegicus clone CH230-140N19, *** SEQUENC... 44 8.4 1
(AC214696) Microcebus murinus clone CH257-83P16, WORKING DRA... 44 8.4 1
(AC211732) Zea mays chromosome 1 clone CH201-167C4; ZMMBBc01... 44 8.4 1
(AC189905) Microcebus murinus clone CH257-83L12, WORKING DRA... 44 8.4 1
(AC169280) Bos taurus clone CH240-229E5, WORKING DRAFT SEQUE... 44 8.4 1
(AC014732) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 44 8.4 1
(FI422515) CH322-152M06.x CHORI-322 Drosophila melanogaster ... 44 8.4 1
(FH422318) CHO_OF4897xm02r1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 8.4 1
(FH297785) CHO_OF4233xp19f1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 8.4 1
(ER681258) SB_BBc05-P01.F SB_BBc Sorghum bicolor genomic 5',... 44 8.4 1
(ER572606) 1093015799279 Global-Ocean-Sampling_GS-36-01-01-2... 44 8.4 1
(EJ766334) 1092963263632 Global-Ocean-Sampling_GS-30-02-01-1... 44 8.4 1
(EJ764304) 1092963174581 Global-Ocean-Sampling_GS-30-02-01-1... 44 8.4 1
(EJ499060) 1095403606169 Global-Ocean-Sampling_GS-28-01-01-1... 44 8.4 1
(EJ268628) 1095351035435 Global-Ocean-Sampling_GS-27-01-01-1... 44 8.4 1
(CZ536857) SRAA-aad05f12.b1 Strongyloides ratti whole genome... 44 8.4 1
(CG750241) P044-4-A05.ya Ppa EcoRI BAC Library Pristionchus ... 44 8.4 1
(AU033461) Dictyostelium discoideum slug cDNA, clone SLA854. 44 8.4 1
(AM598953) Paracentrotus lividus EST, clone MPMGp1174D1868Q,... 44 8.4 1
(C93307) Dictyostelium discoideum slug cDNA, clone SSM605. 44 8.4 1
(BJ372204) Dictyostelium discoideum cDNA clone:ddc11m14, 3' ... 44 8.4 1
(FM247418) Caenorhabditis elegans EST, clone C05_ce3.trans.3... 44 8.4 1
(EY859175) CM30-C1-401-027-D01-CT.F Sweet lime leaf, infecte... 44 8.4 1
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 44 8.4 1
(BX548174) Prochlorococcus marinus MED4 complete genome. 44 8.4 1
(AP006716) Staphylococcus haemolyticus JCSC1435 DNA, complet... 44 8.4 1
(AC125200) Mus musculus chromosome UNKNOWN clone RP23-261P9,... 40 8.5 4
(AM473605) Vitis vinifera contig VV78X090163.15, whole genom... 36 8.5 3
(CP001621) Mycoplasma mycoides subsp. capri str. GM12 transg... 32 9.4 16
(AC006741) Caenorhabditis elegans clone Y38C1, *** SEQUENCIN... 34 9.7 7
(AC235225) Glycine max strain Williams 82 clone GM_WBb0024J2... 38 9.8 5
>(C25617) Dictyostelium discoideum slug cDNA, clone SSA284.
Length = 504
Score = 765 bits (386), Expect = 0.0
Identities = 386/386 (100%)
Strand = Plus / Plus
Query: 288 tcgtgcccttggattttccaaaaaagaaacaatttaaagtcattaataaatttgctcaat 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgtgcccttggattttccaaaaaagaaacaatttaaagtcattaataaatttgctcaat 60
Query: 348 tggaatataaattgggtgttatcgaaagaggtcgtcccattttcgagggtttggtttcaa 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggaatataaattgggtgttatcgaaagaggtcgtcccattttcgagggtttggtttcaa 120
Query: 408 attatccaaatggacccgatatttggaatatctccttgggtatggaattccgtgataaag 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attatccaaatggacccgatatttggaatatctccttgggtatggaattccgtgataaag 180
Query: 468 aatccctcaaatcaagtaaagaattaaaggaaaaaattggaatgcttttcaatcgtccca 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatccctcaaatcaagtaaagaattaaaggaaaaaattggaatgcttttcaatcgtccca 240
Query: 528 tcgctttgaaagtttctgatagaaatattaaacaattctttaaaagattcttacaatttg 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcgctttgaaagtttctgatagaaatattaaacaattctttaaaagattcttacaatttg 300
Query: 588 aaaaagaatttggttcaaatttccctccaaatgaagttaaaaaattggcttttaaatttg 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaaagaatttggttcaaatttccctccaaatgaagttaaaaaattggcttttaaatttg 360
Query: 648 ttgaatcaaataattattaaaataat 673
||||||||||||||||||||||||||
Sbjct: 361 ttgaatcaaataattattaaaataat 386
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 1,063,308,230
Number of extensions: 67186968
Number of successful extensions: 5637748
Number of sequences better than 10.0: 124
Length of query: 790
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 766
Effective length of database: 104,103,628,548
Effective search space: 79743379467768
Effective search space used: 79743379467768
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home