Dictyostelium discoideum cDNA Contig-U09281-1

Assembled

Chromosomal Location of Contig-U09281-1

Sequence Contig-U09281-1

ATCTTCATCG TCATCATTTT CTTCTTCTTG CTCAACAATT GGAGAATTTT
GTCAAATACC TGGTATTGAA AATGAATCAA TTTATAAATT ATTAGAACAA
GATCCAATTA AATTTGTAAA TAATTATTGT AATGCAAGTA ATAAAGATTA
TTTAGATTTA AAAAAGTTTA TTCAAAGATT ACATTCAATA TTTAATCTCG
TAAATTGGTC AATAGATTTT CAAAATTATC CAGCTTTATT ATTTTTAATT
TCAAATATCT ATAGAGAAAT TAATGAACAA CATAAAGAAT ATCAATTAGG
AGTTGCAAAA AGATTAGAAT ATATCATTGA ATTACCATTG ATTTTACCAT
CACATGACAT AAATCAATCA TTTTCAAATC AATTATTAAC TTTATTTAAA
GGAAATAATC AATTTCAAAA ACCATTATTA TTAACTTTAT CTTTATTAA-
---------A TAAATCAAAT AATGATGATA TTTTTAAATT CATCATTAAT
AATGATAAAT TTTTAAATTT ATTTAAATCA TTATTATCAA AAAATAATGA
ACAAGAAATT AAAAAACAAT ATTATTTTAC AACTAATATT AATCAATTTG
AACCAATTTC AAAACAAATT ATTAATGAAG AATTCATTTT AAAATTAGTT
TCAATTATTA AATCTAATGG TATAAATGGT TTAATATTAA ATAAAGATAG
ATCACCTTAT TTAATTTTAC CATCATCAAA TTGTTTAATT GAACCATCAA
CTATTAAATT TGATGATTCA TTAACAAATC TTTATTCAAA AGAAAATCAA
AACAAAACAA TTAAATTTTT AGCAAAATTA AATAATATTA AAAAATAATA
AAAATTTAAA AATAAAGCGA AAGCAATCAT GATGTTTTTT TTTTAAAAAA
AAAAAAA

Translated Amino Acid Sequence Contig-U09281-1

SSSSSFSSSCSTIGEFCQIPGIENESIYKLLEQDPIKFVNNYCNASNKDYLDLKKFIQRL
HSIFNLVNWSIDFQNYPALLFLISNIYREINEQHKEYQLGVAKRLEYIIELPLILPSHDI
NQSFSNQLLTLFKGNNQFQKPLLLTLSLL---

---KSNNDDIFKFIINNDKFLNLFKSLLSKNNEQEIKKQYYFTTNINQFEPISKQIINEE
FILKLVSIIKSNGINGLILNKDRSPYLILPSSNCLIEPSTIKFDDSLTNLYSKENQNKTI
KFLAKLNNIKK**kfknkakaimmfff*kkk

Homology Contig-U09281-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U09281-1 (Contig-U09281-1Q) /CSM_Contig/Conti...   892  0.0
Contig-U14500-1 (Contig-U14500-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U11582-1 (Contig-U11582-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U03565-1 (Contig-U03565-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U03072-1 (Contig-U03072-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U01361-1 (Contig-U01361-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U12538-1 (Contig-U12538-1Q) /CSM_Contig/Conti...    38  0.016
Contig-U11780-1 (Contig-U11780-1Q) /CSM_Contig/Conti...    38  0.016
Contig-U11328-1 (Contig-U11328-1Q) /CSM_Contig/Conti...    38  0.016
Contig-U09357-1 (Contig-U09357-1Q) /CSM_Contig/Conti...    38  0.016

Homology Contig-U09281-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(C24687) Dictyostelium discoideum slug cDNA, clone SL-X095.       890   0.0    1
(AU075953) Dictyostelium discoideum slug cDNA, clone SSA195.      377   e-103  2
(CP001668) Mycoplasma mycoides subsp. capri str. GM12 transg...    38   2e-06  18
(CP001621) Mycoplasma mycoides subsp. capri str. GM12 transg...    38   2e-06  18
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ...    36   7e-06  18
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734...    38   1e-05  17
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699...    38   2e-04  22
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp...    38   5e-04  16
(AF222894) Ureaplasma parvum serovar 3 str. ATCC 700970, com...    38   5e-04  16
(AC214028) Populus trichocarpa clone POP025-N21, complete se...    58   6e-04  1

Homology Contig-U09281-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AF242294_1(AF242294|pid:none) Anacridium aegyptium entomopoxviru...    39   0.31
AY464569_1(AY464569|pid:none) Calliptamus italicus entomopoxviru...    37   0.91
AL844506_46(AL844506|pid:none) Plasmodium falciparum 3D7 chromos...    37   1.2
CP001056_686(CP001056|pid:none) Clostridium botulinum B str. Ekl...    35   4.5
BA000021_41(BA000021|pid:none) Wigglesworthia glossinidia endosy...    34   5.9
AF063866_73(AF063866|pid:none) Melanoplus sanguinipes entomopoxv...    34   5.9