Homology Contig-U09227-1 vs DNA
Query= Contig-U09227-1 (Contig-U09227-1Q) /CSM_Contig/Contig-U09227-1Q.Seq.d
(1017 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU062116) Dictyostelium discoideum slug cDNA, clone SLH662. 682 0.0 3
(AU039373) Dictyostelium discoideum slug cDNA, clone SLH662. 609 e-170 1
(GR578225) CBZY1129.b1 CBZY Dictyostelium purpureum 18 hr st... 64 1e-05 1
(GR583342) CCAA1558.b1 CCAA Dictyostelium purpureum 0 hr sta... 34 0.005 3
(AC102505) Mus musculus chromosome 1, clone RP24-73K7, compl... 52 0.045 1
(FE955671) Aaem03313 Antheraea assama 96 hours embryo cDNA l... 32 0.075 4
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 36 0.100 19
(FN357483) Schistosoma mansoni genome sequence supercontig S... 38 0.10 12
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 34 0.11 20
(FP085581) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 0.14 5
(CP001668) Mycoplasma mycoides subsp. capri str. GM12 transg... 36 0.15 18
(CP001621) Mycoplasma mycoides subsp. capri str. GM12 transg... 36 0.16 18
(EL849815) CBXT824.b1 NICHD_XGC_trop_25 Xenopus (Silurana) t... 50 0.18 1
(EL814577) CBWN1048.b1 NICHD_XGC_tropTe1 Xenopus (Silurana) ... 50 0.18 1
(EL662604) AGENCOURT_103340538 NICHD_XGC_tropInt_62 Xenopus ... 50 0.18 1
(EL662598) AGENCOURT_103352708 NICHD_XGC_tropInt_60 Xenopus ... 50 0.18 1
(DT424092) JGI_CABJ4683.rev NIH_XGC_tropSki1 Xenopus (Silura... 50 0.18 1
(DN086340) JGI_CABE1175.fwd NIH_XGC_tropOva1 Xenopus (Silura... 50 0.18 1
(DN015855) JGI_CAAQ12282.fwd NIH_XGC_tropHrt1 Xenopus (Silur... 50 0.18 1
(CX508573) JGI_XZG52904.fwd NIH_XGC_tropGas7 Xenopus (Silura... 50 0.18 1
(CX500298) JGI_XZG31676.fwd NIH_XGC_tropGas7 Xenopus (Silura... 50 0.18 1
(CX496384) JGI_XZG38147.fwd NIH_XGC_tropGas7 Xenopus (Silura... 50 0.18 1
(CX488628) JGI_XZG30762.fwd NIH_XGC_tropGas7 Xenopus (Silura... 50 0.18 1
(CX475806) JGI_XZG50168.fwd NIH_XGC_tropGas7 Xenopus (Silura... 50 0.18 1
(CX408921) JGI_XZT31914.fwd NIH_XGC_tropTad5 Xenopus (Silura... 50 0.18 1
(AL958175) Xenopus tropicalis EST, clone TGas138c20 5'. 50 0.18 1
(AL870852) Xenopus tropicalis EST, clone TEgg130d22 5'. 50 0.18 1
(AL862147) Xenopus tropicalis EST, clone TEgg130e22 5'. 50 0.18 1
(ES676368) CCAX2879.b1 NICHD_XGC_tropEye1 Xenopus (Silurana)... 50 0.18 1
(ER578509) 1093015823700 Global-Ocean-Sampling_GS-36-01-01-2... 44 0.18 2
(AC178750) Strongylocentrotus purpuratus clone R3-16D1, WORK... 36 0.21 9
(AE001362) Plasmodium falciparum 3D7 chromosome 2, complete ... 42 0.22 19
(AC178135) Strongylocentrotus purpuratus clone R3-3078G13, W... 36 0.24 5
(BD061520) Genome DNA of symbiotic bacteria of aphid. 34 0.31 17
(AR409405) Sequence 1 from patent US 6632935. 34 0.31 17
(BA000003) Buchnera aphidicola str. APS (Acyrthosiphon pisum... 34 0.31 17
(CP001158) Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisu... 34 0.32 17
(CP001161) Buchnera aphidicola str. 5A (Acyrthosiphon pisum)... 34 0.32 17
(CE563974) tigr-gss-dog-17000312700916 Dog Library Canis lup... 36 0.51 2
(AC177746) Strongylocentrotus purpuratus clone R3-1008E12, W... 36 0.57 7
(AF125956) Caenorhabditis elegans cosmid DC2, complete seque... 48 0.70 1
(AC181186) Strongylocentrotus purpuratus clone R3-14A24, WOR... 48 0.70 1
(AC172402) Strongylocentrotus purpuratus clone R3-14C23, WOR... 48 0.70 1
(AC172397) Strongylocentrotus purpuratus clone R3-14A23, WOR... 48 0.70 1
(AC006844) Caenorhabditis elegans clone Y108G3Y, *** SEQUENC... 48 0.70 1
(AC233339) Monodelphis domestica clone VMRC18-110I2, WORKING... 40 0.79 6
(AL844508) Plasmodium falciparum 3D7 chromosome 9. 36 1.2 18
(CP000361) Arcobacter butzleri RM4018, complete genome. 38 1.4 17
(EY324011) CAWX9704.fwd CAWX Helobdella robusta Primary Earl... 36 1.6 2
(D90426) Mycoplasma capricolum dnaN, rpmH, dnaA genes for Dn... 42 1.8 2
(BJ350069) Dictyostelium discoideum cDNA clone:dda38h17, 3' ... 36 2.2 2
(EJ148236) 1092343733978 Global-Ocean-Sampling_GS-27-01-01-1... 40 2.3 2
(DH478750) Monosiga ovata DNA, fosmid clone: MOF-030F17, gen... 36 2.3 2
(ET930587) CHO_OF245xh02r1.ab1 CHO_OF Nicotiana tabacum geno... 38 2.4 2
(BV673878) S215P60210RH11.T0 Clara Pan troglodytes troglodyt... 46 2.8 1
(FN358724) Schistosoma mansoni genome sequence supercontig S... 46 2.8 1
(FN357382) Schistosoma mansoni genome sequence supercontig S... 46 2.8 1
(AC162663) Bos taurus clone CH240-121B9, WORKING DRAFT SEQUE... 46 2.8 1
(AC220031) Bos taurus clone CH240-315L18, WORKING DRAFT SEQU... 46 2.8 1
(EK185142) 1095458141163 Global-Ocean-Sampling_GS-31-01-01-1... 46 2.8 1
(EK170489) 1095458071582 Global-Ocean-Sampling_GS-31-01-01-1... 46 2.8 1
(EJ915407) 1093018558243 Global-Ocean-Sampling_GS-30-02-01-1... 46 2.8 1
(EJ463470) 1095383002050 Global-Ocean-Sampling_GS-28-01-01-1... 46 2.8 1
(DH290804) Oryzias latipes Fosmid clone:GOLWFno635_d24, reve... 46 2.8 1
(DH122965) Oryzias latipes Fosmid clone:GOLWFno388_d09, reve... 46 2.8 1
(CU758753) A BAC library has been constructed from PN40024 g... 46 2.8 1
(CT867006) Equus caballus GSS, BAC clone CH241-16L16, T7 end... 46 2.8 1
(BJ425030) Dictyostelium discoideum cDNA clone:ddv54k09, 5' ... 46 2.8 1
(AF057019) Dictyostelium discoideum interaptin (abpD) gene, ... 32 2.8 5
(AC181315) Strongylocentrotus purpuratus clone R3-4017M11, W... 38 2.8 5
(CP000683) Rickettsia massiliae MTU5, complete genome. 36 3.0 20
(AC176510) Strongylocentrotus purpuratus clone R3-3072O6, WO... 40 3.1 6
(AC184314) Strongylocentrotus purpuratus clone R3-3012A5, WO... 36 3.1 5
(AP006852) Candida albicans genomic DNA, chromosome 7, compl... 34 3.3 14
(AC177041) Strongylocentrotus purpuratus clone R3-38N14, WOR... 40 3.3 5
(AC201663) Strongylocentrotus purpuratus clone R3-3081B8, WO... 38 3.6 4
(AJ936604) Theileria annulata EST, clone ta0077G03_b. 38 3.6 2
(AJ934857) Theileria annulata EST, clone ta0032D02_2_b. 38 3.6 2
(AC171735) Solanum lycopersicum chromosome 11 clone C11HBa01... 34 3.7 5
(FE960874) Aaem08516 Antheraea assama 96 hours embryo cDNA l... 32 3.8 3
(FE963845) Aaem11487 Antheraea assama 96 hours embryo cDNA l... 32 3.8 3
(DQ378280) Drosophila virilis strain Tucson 15010-1001.10 fo... 38 3.8 4
(AC177110) Strongylocentrotus purpuratus clone R3-4014C19, W... 34 3.9 7
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)... 36 3.9 13
(AC181940) Strongylocentrotus purpuratus clone R3-1009D16, W... 36 4.0 5
(FE961619) Aaem09261 Antheraea assama 96 hours embryo cDNA l... 32 4.1 3
(FE952726) Aaem00368 Antheraea assama 96 hours embryo cDNA l... 32 4.1 3
(AC168390) Strongylocentrotus purpuratus clone R3-4002P16, W... 34 4.2 7
(ER504447) 1093015416127 Global-Ocean-Sampling_GS-35-01-01-1... 32 4.6 3
(EK548311) 1095516104091 Global-Ocean-Sampling_GS-32-01-01-1... 34 4.7 3
(AC177502) Strongylocentrotus purpuratus clone R3-9D18, WORK... 38 4.8 4
(AC175945) Strongylocentrotus purpuratus clone R3-17C11, WOR... 36 4.9 5
(DQ088855) Uncultured bacterium eBACmed18B02 predicted fumar... 32 5.0 5
(AC180132) Strongylocentrotus purpuratus clone R3-4007C2, WO... 38 5.1 5
(AF153362) Dictyostelium discoideum adenylyl cyclase (acrA) ... 34 5.1 3
(AC221072) Bos taurus clone CH240-407J21, WORKING DRAFT SEQU... 34 5.2 2
(AC223570) Bos taurus clone CH240-465D13, WORKING DRAFT SEQU... 34 5.2 2
(AP003330) Oryza sativa Japonica Group genomic DNA, chromoso... 32 5.2 2
(AP003022) Oryza sativa Japonica Group genomic DNA, chromoso... 32 5.3 2
(CP000727) Clostridium botulinum A str. Hall, complete genome. 38 5.4 18
(AC210360) Solanum lycopersicum chromosome 7 clone C07HBa018... 32 5.5 2
(AC174118) Strongylocentrotus purpuratus clone R3-36N2, WORK... 38 5.6 3
(CP000048) Borrelia hermsii DAH, complete genome. 34 5.7 17
(AC133125) Homo sapiens chromosome 3 clone CTD-2563A18, *** ... 40 5.7 4
(FE952975) Aaem00617 Antheraea assama 96 hours embryo cDNA l... 32 5.8 3
(AJ935305) Theileria annulata EST, clone ta0079A06_2_b. 38 6.1 2
(AJ935226) Theileria annulata EST, clone ta0052F01_b. 38 6.2 2
(AJ933666) Theileria annulata EST, clone ta0077G03_2_b. 38 6.2 2
(AF099915) Caenorhabditis elegans cosmid E02H9, complete seq... 38 6.3 3
(AC201576) Strongylocentrotus purpuratus clone R3-4010F11, W... 34 6.3 6
(AC013799) Homo sapiens, clone RP11-20J1, complete sequence. 38 6.8 7
(AC012053) Homo sapiens chromosome 15 clone RP11-64A16 map 1... 42 6.9 3
(AC115019) Mus musculus chromosome 5, clone RP24-224J7, comp... 42 7.0 3
(AC201577) Strongylocentrotus purpuratus clone R3-4010P15, W... 34 7.1 6
(FP245704) Ectocarpus siliculosus mRNA 5-prime sequence from... 38 7.1 2
(AC175034) Mus musculus BAC clone RP23-204E23 from chromosom... 36 7.2 5
(CP000726) Clostridium botulinum A str. ATCC 19397, complete... 38 7.2 18
(FE952386) Aaem00028 Antheraea assama 96 hours embryo cDNA l... 32 7.2 3
(FP325323) Brassica rapa subsp. pekinensis clone KBrH081C05,... 40 7.2 5
(AC184882) Strongylocentrotus purpuratus clone R3-1015A21, W... 36 7.2 6
(AC084855) Homo sapiens chromosome 15, clone CTD-3076O17, co... 42 7.4 3
(DX933686) MUGQ_CH252P088F02Sp6_CP106_011 CHORI-252 Vervet M... 36 7.4 2
(EI750985) CHORI520R121H20TR BAC library from the breast cel... 38 7.5 2
(EJ524841) 1092955176436 Global-Ocean-Sampling_GS-29-01-01-1... 40 7.7 2
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g... 38 7.7 18
(BJ326988) Dictyostelium discoideum cDNA clone:dda18b24, 5' ... 34 7.8 3
(EY352490) CAWZ18849.rev CAWZ Helobdella robusta Primary Lat... 34 7.8 2
(AC149720) Bos taurus NOVECTOR CH240-248M14 (Children's Hosp... 34 8.0 9
(EY374688) CAXA15214.fwd CAXA Helobdella robusta Subtracted ... 34 8.1 2
(GH009822) G1220P140RC19.T0 Neurospora crassa cDNA - 1 hour ... 38 8.1 2
(BZ079899) lkg22e03.b1 B.oleracea002 Brassica oleracea genom... 42 8.1 2
(AC179220) Strongylocentrotus purpuratus clone R3-41E1, WORK... 38 8.2 6
(EY326878) CAWY11882.rev CAWY Helobdella robusta Subtracted ... 36 8.3 2
(FE956951) Aaem04593 Antheraea assama 96 hours embryo cDNA l... 32 8.3 3
(BH711102) BOMOT88TF BO_2_3_KB Brassica oleracea genomic clo... 42 8.3 2
(AC180326) Strongylocentrotus purpuratus clone R3-3008P13, W... 36 8.5 6
(AC180271) Strongylocentrotus purpuratus clone R3-3123M09, W... 42 8.5 4
(AC015837) Homo sapiens clone RP11-23I17, WORKING DRAFT SEQU... 34 8.5 5
(ED433792) AUAC-aba42b01.g1 Ascaris suum whole genome shotgu... 42 8.7 2
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 32 8.7 22
(EY392513) CAXA9849.rev CAXA Helobdella robusta Subtracted L... 36 8.7 2
(EA694061) Sequence 72940 from patent US 7365185. 40 8.7 4
(EY381462) CAXA3478.rev CAXA Helobdella robusta Subtracted L... 36 8.8 2
(AC011914) Arabidopsis thaliana chromosome 1 BAC F14K14 geno... 38 9.0 6
(EY310083) CAWX21951.fwd CAWX Helobdella robusta Primary Ear... 34 9.0 2
(AM285313) Spiroplasma citri GII3-3X chromosome, contig Cont... 34 9.1 4
(AC181070) Strongylocentrotus purpuratus clone R3-3050D14, W... 36 9.1 4
(EY324348) CAWX9886.fwd CAWX Helobdella robusta Primary Earl... 34 9.1 2
(AC170779) Bos taurus clone CH240-248E11, WORKING DRAFT SEQU... 34 9.2 9
(EJ112306) 1092343159665 Global-Ocean-Sampling_GS-27-01-01-1... 40 9.3 2
(CC586704) CH240_384I7.T7 CHORI-240 Bos taurus genomic clone... 36 9.5 2
(AL606652) Oryza sativa genomic DNA, chromosome 4, BAC clone... 40 9.8 5
>(AU062116) Dictyostelium discoideum slug cDNA, clone SLH662.
Length = 608
Score = 682 bits (344), Expect(3) = 0.0
Identities = 344/344 (100%)
Strand = Plus / Plus
Query: 46 gaattaataaaaactgaaataccatggacaattttagatcaaccattaaattcattttca 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 gaattaataaaaactgaaataccatggacaattttagatcaaccattaaattcattttca 105
Query: 106 acttatggtgatgcaattttatgtatacttcaaaagtttaatttctttggtattggtaga 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 acttatggtgatgcaattttatgtatacttcaaaagtttaatttctttggtattggtaga 165
Query: 166 tcaacattagatgttttgttagagtattatcaagaatcttataccaataatatttattta 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 tcaacattagatgttttgttagagtattatcaagaatcttataccaataatatttattta 225
Query: 226 gataaaaaggaatacattgataaatgtttatcaatactttataatattgatgaatctata 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gataaaaaggaatacattgataaatgtttatcaatactttataatattgatgaatctata 285
Query: 286 gcaaaaagaataaaaacaagatcaccaactttttcaccaattaaaaatttatcactaaat 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gcaaaaagaataaaaacaagatcaccaactttttcaccaattaaaaatttatcactaaat 345
Query: 346 agtgatggtagcgtcatttcttcaaatgatgataatagtaacag 389
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 agtgatggtagcgtcatttcttcaaatgatgataatagtaacag 389
Score = 224 bits (113), Expect(3) = 0.0
Identities = 113/113 (100%)
Strand = Plus / Plus
Query: 494 gtggtaaacgtgataatgaaaagaaattaaaggatgcaaagaaacgtcaagctgaaatta 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gtggtaaacgtgataatgaaaagaaattaaaggatgcaaagaaacgtcaagctgaaatta 553
Query: 554 tggcaaaatttgcaaaacaacaaactcaattccttcaaaatgtagatgattta 606
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tggcaaaatttgcaaaacaacaaactcaattccttcaaaatgtagatgattta 606
Score = 56.0 bits (28), Expect(3) = 0.0
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 attaaattaaaatcatcatcgtcatcat 28
||||||||||||||||||||||||||||
Sbjct: 1 attaaattaaaatcatcatcgtcatcat 28
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 1,247,199,651
Number of extensions: 81457046
Number of successful extensions: 7529422
Number of sequences better than 10.0: 152
Length of query: 1017
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 993
Effective length of database: 104,103,628,548
Effective search space: 103374903148164
Effective search space used: 103374903148164
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home