Dictyostelium discoideum cDNA Contig-U09221-1

Assembled

Chromosomal Location of Contig-U09221-1

Sequence Contig-U09221-1

AAAAATTAAA AAAACGAAAA CAATAATAAT AAAAATAATA AATAAATGTT
AAGAACAACA TTTAGAAAAG GATTTAATTT AAAATGTTTT TCCAAAGATT
GGAATCAAAC AAGACAATAT TCAAATTATA CGAAAATGAC AATTTTTGAT
ACAAATGTAA AAACTATTCA AAAAAATAAT ACAGTTACAA ATGTTGATGA
CCCAAAACAT TATGATTATT TAATGAATGA AGTTGCTGAT AGATTAGCTG
ATAGAATTTT AGATATTAAA GATATAAAAT GTGGTAATGT TTTAGATTTT
GGTAGTAGAA ATGGAGCATT ATTTAAATAT ATACAAGAAA AAGGTGCAAA
AATTGATAAA TATTATATGG TTGAATCATC AAAAGAATTA TTATATAGAG
ATGATAATAA TGTCTCTCAA GAGAATGAAG ATGATAATAA TAATAATAAA
GTTAAACCTA CAAAAATATT AGTTAATAGT TTAGAAGATA AAATTGAAGG
TATTGAAGAT CAAAGTTTAG ATTTAATTAT AAGTAATTTA TCATTACATT
GGGTAAATGA TTTACCAGGA GTTTTTGGAG GATTAAAGAG ATTATTAAAA
CCAAATGGTG TGTTTTTGGC TCGTTATTTG GTGAGGATAC ATT-------
---CAAAGAT TAGTGATATT GGTAACATTT TATCAAAGAA TAGATACACA
TTACCAACAG TGGACACTGA AAAGATTACA ATAAATTATG ATAATATGTT
TGTATTAATG AGAGATTTAC AAAATATGGG TGAAAATAAT GCAATCTTAA
AAAGAAGAAA CTATACAAGT AAAGATACAT TCTTAGCTGC ATCTGCAATC
TATAAACATT TATATGGTAA TGAAGATAAT AATTCAATTC CTGCAACTTT
TCAAATCATT TATTTAATCG GTTGGGCACC ACATGAATCA CAACAAAAAC
CATTACAACG TGGTTCTGCA AAAAACATTT TAGTGAAATT TCTGGTACAA
GTTCATTTGG TTATAAATTT GATAATGATT CTTCAATACC TTCAATTTTA
ACAAATGAAA ATAATAGTGT TACATTATCA CAACAACAAC AACAACAAGG
AATTGAACCA CAACAATCAA ATGATGATTC AATTAATGAA CCATTCCCAA
AAACTGATGA TTTTGTAATT AAAAGATTAG ATTATCATGG TAATTTCCAT
TTTGAAAAAC AGCAACAACA ACAACAACAA CAAGATCAAA ATAAAGAATC
ATCTGATGAA ATTAACAAAA ATAAAGATGA CAAATAAATT TTTTAAAATA
C

Translated Amino Acid Sequence Contig-U09221-1

kn*knennnnknnk*MLRTTFRKGFNLKCFSKDWNQTRQYSNYTKMTIFDTNVKTIQKNN
TVTNVDDPKHYDYLMNEVADRLADRILDIKDIKCGNVLDFGSRNGALFKYIQEKGAKIDK
YYMVESSKELLYRDDNNVSQENEDDNNNNKVKPTKILVNSLEDKIEGIEDQSLDLIISNL
SLHWVNDLPGVFGGLKRLLKPNGVFLARYLVRIH---

---KISDIGNILSKNRYTLPTVDTEKITINYDNMFVLMRDLQNMGENNAILKRRNYTSKD
TFLAASAIYKHLYGNEDNNSIPATFQIIYLIGWAPHESQQKPLQRGSAKNILVKFLVQVH
LVINLIMILQYLQF*qmkiivlhyhnnnnnkelnhnnqmmiqlmnhsqklmil*lkd*ii
mvisilknsnnnnnnkikiknhlmkltkikmtnkffki

Homology Contig-U09221-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U09221-1 (Contig-U09221-1Q) /CSM_Contig/Conti...  1945  0.0
Contig-U11532-1 (Contig-U11532-1Q) /CSM_Contig/Conti...    52  2e-06
Contig-U08887-1 (Contig-U08887-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U07010-1 (Contig-U07010-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U12434-1 (Contig-U12434-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U12387-1 (Contig-U12387-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U11681-1 (Contig-U11681-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U11328-1 (Contig-U11328-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U10517-1 (Contig-U10517-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U08163-1 (Contig-U08163-1Q) /CSM_Contig/Conti...    42  0.001

Homology Contig-U09221-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU062056) Dictyostelium discoideum slug cDNA, clone SLH404.      926   0.0    2
(BJ346978) Dictyostelium discoideum cDNA clone:dda25a22, 3' ...   638   0.0    5
(AU039996) Dictyostelium discoideum slug cDNA, clone SLH404.      844   0.0    2
(BJ329633) Dictyostelium discoideum cDNA clone:dda25a22, 5' ...   632   0.0    2
(GR586181) CCAB1327.b1 CCAB Dictyostelium purpureum 0 hr sta...   107   2e-68  7
(GR586182) CCAB1327.g1 CCAB Dictyostelium purpureum 0 hr sta...    98   2e-50  5
(CP001668) Mycoplasma mycoides subsp. capri str. GM12 transg...    34   4e-06  18
(CP001621) Mycoplasma mycoides subsp. capri str. GM12 transg...    34   4e-06  18
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl...    38   5e-05  18
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    40   7e-05  19

Homology Contig-U09221-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54JW0) RecName: Full=Probable methyltransferase DDB_G0287769, ...   352   0.0
(A3KP37) RecName: Full=Probable methyltransferase C20orf7 homolo...   122   5e-42
CU138540_3(CU138540|pid:none) Zebrafish DNA sequence from clone ...   122   6e-42
(Q5TEU4) RecName: Full=Probable methyltransferase C20orf7, mitoc...   113   3e-39
AM920433_59(AM920433|pid:none) Penicillium chrysogenum Wisconsin...    96   9e-37
AL390091_5(AL390091|pid:none) Neurospora crassa DNA linkage grou...   100   3e-36
CP000498_609(CP000498|pid:none) Pichia stipitis CBS 6054 chromos...    96   6e-36
FN392321_324(FN392321|pid:none) Pichia pastoris GS115 chromosome...   109   6e-36
AM270014_8(AM270014|pid:none) Aspergillus niger contig An02c0190...   102   1e-35
CR382129_81(CR382129|pid:none) Yarrowia lipolytica strain CLIB12...   102   4e-33