<Clone: Contig-U09104-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U09104-1

Dictyostelium discoideum cDNA Project Home

Assembled

Chromosomal Location of Contig-U09104-1

< more Chromosomal info >

Chromosome Number 4
Length 5430582
Start Poin 1,865,227
End Point 1,864,115
Strand MINUS

Sequence Contig-U09104-1

ATTTTTATTT TTTAAAAAAT TATGATAAAA TTATTTAATA ATAATAATAA
TTTAATTAGA TTTCAACAAA TATTAAAAAG AAATTATTCA AATAAAAAAG
TGAAAAATGT AGAGGATATC AATATTGATA GTAGTAATGA TAATAATACA
TTAGTTCAAC AATATGTAAA TAAAGAATAT GAAAGTTATA AAATTCATAA
ACCAGTTTTT ATTAAAGAAG TTTTAGAGAT ACTAAATCCA CAACCAAATA
AAGTTTATAT AGATGCAACA TTTGGTATGG GTGGACATTC AAGAGGTATT
TTAGAAACTT GTAAAGATTG TTATGTGATT GCATTTGATA GAGATCCAAA
AGTTTTTGAA ATGACAAAAC CATTAAGATC AGAATTTAAA GATCGTTTAA
TCACTATAAA TAGTACATTT AGTTCAATGA GATCTGCGCT AAAAGAAAAA
AACCTAGATC ATCTTAAAAT ATCTGGTATC CTTTATGA-- --------CT
CTTTTAAAAA AGAATTAGAA GGACCATTAG ATATGAGAAT GAATCAAAAT
AGTTCACAAA TTACTGCATA TGATATAATT AATACATTTT CAGAGAAAGA
TTTAAGAGAT ATTTTCTTTT ATTATGGTGA AGAGAAACAT ACTAAAAATA
TAGCAAATGA AATTTTAAGA AAGAGAAAGA TTGAACCAAT AAAGAATACA
AGTGATTTAG TAAAGATTGT AGAATCATCA ATACCTTATC CAATGGCATT
AAAAACCATA TCAAGAGTAT TCAGATCATT GAGAATGTTT GTAAATGATG
AATTGAATGA AATTAAAATT GGTTTAACTC AAGGTGAACA ATTATTAGAA
CCAAATTCAC CACTATTAGC AATTTCATTT CATTCAATTG AAGATAGAAT
TGTTAAACAA TATTTAAATA AATATACAAC AATTGAAGAA CCAACTTTTA
AATTCTCTCC AACCTATAAA TCACCTATTT TCCCAAGTAA AGAAGAGCTC
GAATGGAATC CAAGATCAAA ATCTGCTATC TTAAGAACTG CAATTAGAAC
TTCAAATAAA CCAATTTCCT CAAATTATAA TATTATTTAA AAAAAAATTA
AAAAAAATTA AAAAACAAAA

Translated Amino Acid Sequence Contig-U09104-1

<All Frames> 
ifif*KIMIKLFNNNNNLIRFQQILKRNYSNKKVKNVEDINIDSSNDNNTLVQQYVNKEY
ESYKIHKPVFIKEVLEILNPQPNKVYIDATFGMGGHSRGILETCKDCYVIAFDRDPKVFE
MTKPLRSEFKDRLITINSTFSSMRSALKEKNLDHLKISGILY---

---SFKKELEGPLDMRMNQNSSQITAYDIINTFSEKDLRDIFFYYGEEKHTKNIANEILR
KRKIEPIKNTSDLVKIVESSIPYPMALKTISRVFRSLRMFVNDELNEIKIGLTQGEQLLE
PNSPLLAISFHSIEDRIVKQYLNKYTTIEEPTFKFSPTYKSPIFPSKEELEWNPRSKSAI
LRTAIRTSNKPISSNYNII*kkikkn*ktk


Homology Contig-U09104-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U09104-1 (Contig-U09104-1Q) /CSM_Contig/Conti...  1842  0.0
Contig-U08365-1 (Contig-U08365-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U06941-1 (Contig-U06941-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U14090-1 (Contig-U14090-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U05351-1 (Contig-U05351-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U14726-1 (Contig-U14726-1Q) /CSM_Contig/Conti...    38  0.020
Contig-U12421-1 (Contig-U12421-1Q) /CSM_Contig/Conti...    38  0.020
Contig-U12011-1 (Contig-U12011-1Q) /CSM_Contig/Conti...    38  0.020
Contig-U11203-1 (Contig-U11203-1Q) /CSM_Contig/Conti...    38  0.020
Contig-U10913-1 (Contig-U10913-1Q) /CSM_Contig/Conti...    38  0.020


Homology Contig-U09104-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(BJ401058) Dictyostelium discoideum cDNA clone:dds22b04, 3' ...  1170   0.0    1
(BJ390320) Dictyostelium discoideum cDNA clone:dds22b04, 5' ...   668   0.0    2
(EK246368) 1095460259393 Global-Ocean-Sampling_GS-31-01-01-1...    48   3e-09  4
(EJ486645) 1095403504167 Global-Ocean-Sampling_GS-28-01-01-1...    48   4e-07  3
(AY967107) Synthetic construct isolate FTT0695 unknown prote...    52   2e-06  2
(EJ072205) 1095458093316 Global-Ocean-Sampling_GS-26-01-01-1...    32   2e-05  6
(EK293174) 1095462337296 Global-Ocean-Sampling_GS-31-01-01-1...    38   7e-05  4
(EJ156521) 1092344031774 Global-Ocean-Sampling_GS-27-01-01-1...    48   3e-04  2
(AE017263) Mesoplasma florum L1 complete genome.                   32   3e-04  19
(EJ740152) 1092962011832 Global-Ocean-Sampling_GS-30-02-01-1...    30   5e-04  5


Homology Contig-U09104-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


(Q2GK29) RecName: Full=S-adenosyl-L-methionine-dependent methylt...   125   5e-47
CP001130_850(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, co...   135   3e-44
(P65427) RecName: Full=S-adenosyl-L-methionine-dependent methylt...   116   5e-41
CP000911_1418(CP000911|pid:none) Brucella suis ATCC 23445 chromo...   116   5e-41
U94707_2(U94707|pid:none) Enterococcus faecalis strain A24836 ce...   138   5e-41
CP001146_1092(CP001146|pid:none) Dictyoglomus thermophilum H-6-1...   117   7e-41
(Q929X6) RecName: Full=S-adenosyl-L-methionine-dependent methylt...   126   2e-40
CP000758_1720(CP000758|pid:none) Ochrobactrum anthropi ATCC 4918...   120   3e-40
AE016830_910(AE016830|pid:none) Enterococcus faecalis V583, comp...   138   3e-40
(Q71XX2) RecName: Full=S-adenosyl-L-methionine-dependent methylt...   128   3e-40


<Clone: Contig-U09104-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Project Home