Dictyostelium discoideum cDNA Contig-U08411-1

Assembled

Chromosomal Location of Contig-U08411-1

Sequence Contig-U08411-1

AAATTAATTA ATCAAAATAA AATAAAAATA TAAAAATAAA AAAAATAAAA
ATATAATAAA AATTAAAATT TTATTATGGA TCAATATGAA ATATTAGGTG
CATTAGGAAA AGGGTCATTT GGTGTTGTTT CAAAGATCAA AAGAAAAGAA
GATGGAAGAG TTTTAGTTTG GAAAGAAATT TGTTATGAAA ATATGCAAGA
AAAAGAGAAA CAATTATTAG TGAATGAAGT TAATATCCTT CAAAAATTAA
AACATCAAAA TATTGTTAGA TATTATGACA GAATCATTGA TAAACCATCT
TCAAGATTAT ATATTATCAT GGAACATTGT TCTGGTGGTG ATTTATCACA
ACTTATTAAA AAATGTAGAA ATGAAAGAAC ATATATGGAT GAAGAAGTAA
TTTGGAGAAC ATTACTTCAA ATTTTATCAG CACTTCAAGA AATTCATAAT
AGAAAAGATG GTGTAATTTT ACATAGAGAT ATTAAACCAG GTAATTTATT
TTTAGATGAA AATAAAAATA TTAAATTGGG TGATTTTGGT TTAGCTAAAA
TTTTAAATGA ATCACTTTAT GCTCATACTT TTGTTGGTAC TCCATATTAT
ATGAGTCCTG AACAAATTCA TGGACTTAAA TATAATGAAA GATCAGATGT
TTGGTCAGTT GGTTGTTTAA TTTATGAAAT GGCAACATTA TCCCCCCCAT
TTGAAGCAAC AAATCAAGCT CAATTAACAA GTAAAATTCA AGTTGGTAGA
TATAACCCAA TTCCATCACA ATATTCTGAA CATCTTTCAA AAGTTATCTC
TTTAATGATT AATGTTGATC CAAAATCAAG ACCAAATGTA AATGAATTAT
TAGGATATTC TTTTATTTCA TTTAAAGTTA AAGAAAGAAA ATTAAATATC
TATTATCAAG GTTTAAAACA AATGGATGAA GATTTAAAGA TTAAAGAAAA
GAAATTATCA GATATTGAAA GAGATCTCCA AGTTAAAGAA CAACATTTAC
TCTTGAGAGA ACAACAAATT AATCAAAGAG AGAAACTTTT ATTAGATAAA
GAAAACTTTG AAACTCAAAG TAGAATCAAT ATCATGAATC AACAATTACA
ACAACAACAA CAAAATCAAT TACAACATCA AATTAGTAAT CTTTCTCTCA
ATTGTAATAA CAGTGTTAAT AGTTGTAGTA GTAGTAGTAA TAATAATACT
ACTAATAGTA TAAATACTCA ACAACAAATT CATATTCAAC ATAACACACA
ACAACAACAG CAACAACAAC AAACATTCCA ACCATATCAA ATTAAAAGAA
CTTTTACTAC CCCACTCCCA AATTTTAAGT AATTTAGGAA ATCAAAACTA
CCCTTTATGC TAAACAACAA AAAATAAAAA AAAAAAAAAA AAAAAA

Translated Amino Acid Sequence Contig-U08411-1

klinqnkiki*k*kk*kynkn*NFIMDQYEILGALGKGSFGVVSKIKRKEDGRVLVWKEI
CYENMQEKEKQLLVNEVNILQKLKHQNIVRYYDRIIDKPSSRLYIIMEHCSGGDLSQLIK
KCRNERTYMDEEVIWRTLLQILSALQEIHNRKDGVILHRDIKPGNLFLDENKNIKLGDFG
LAKILNESLYAHTFVGTPYYMSPEQIHGLKYNERSDVWSVGCLIYEMATLSPPFEATNQA
QLTSKIQVGRYNPIPSQYSEHLSKVISLMINVDPKSRPNVNELLGYSFISFKVKERKLNI
YYQGLKQMDEDLKIKEKKLSDIERDLQVKEQHLLLREQQINQREKLLLDKENFETQSRIN
IMNQQLQQQQQNQLQHQISNLSLNCNNSVNSCSSSSNNNTTNSINTQQQIHIQHNTQQQQ
QQQQTFQPYQIKRTFTTPLPNFK*frksklpfmlnnkk*kkkkkk

Homology Contig-U08411-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U08411-1 (Contig-U08411-1Q) /CSM_Contig/Conti...  1976  0.0
Contig-U04168-1 (Contig-U04168-1Q) /CSM_Contig/Conti...    60  7e-09
Contig-U11258-1 (Contig-U11258-1Q) /CSM_Contig/Conti...    58  3e-08
Contig-U02015-1 (Contig-U02015-1Q) /CSM_Contig/Conti...    54  4e-07
Contig-U12625-1 (Contig-U12625-1Q) /CSM_Contig/Conti...    50  7e-06
Contig-U12134-1 (Contig-U12134-1Q) /CSM_Contig/Conti...    50  7e-06
Contig-U11889-1 (Contig-U11889-1Q) /CSM_Contig/Conti...    50  7e-06
Contig-U09161-1 (Contig-U09161-1Q) /CSM_Contig/Conti...    50  7e-06
Contig-U14238-1 (Contig-U14238-1Q) /CSM_Contig/Conti...    48  3e-05
Contig-U12564-1 (Contig-U12564-1Q) /CSM_Contig/Conti...    48  3e-05

Homology Contig-U08411-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ388914) Dictyostelium discoideum cDNA clone:dds16c23, 5' ...   942   0.0    1
(BJ388794) Dictyostelium discoideum cDNA clone:dds16c12, 5' ...   902   0.0    1
(AU061346) Dictyostelium discoideum slug cDNA, clone SLD805.      628   e-175  1
(BJ402316) Dictyostelium discoideum cDNA clone:dds16c12, 3' ...   287   e-145  4
(AU269293) Dictyostelium discoideum vegetative cDNA clone:VS...   281   4e-71  1
(AM054590) Isotricha prostoma EST, clone Iso_D07.                  80   3e-10  1
(FE233588) CAPG2363.fwd CAPG Naegleria gruberi amoeba stage ...    50   1e-07  2
(CT816002) Paramecium tetraurelia 5-PRIME EST from clone LK0...    46   2e-07  3
(AM601253) Entamoeba invadens IP1 GSS, clone inv005e09.q1k.        52   1e-04  2
(AM619996) Entamoeba invadens IP1 GSS, clone inv124f04.p1k.        52   1e-04  2

Homology Contig-U08411-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


CR760717_1(CR760717|pid:none) Xenopus tropicalis finished cDNA, ...   332   2e-89
AB019556_1(AB019556|pid:none) Xenopus laevis mRNA for Nek2A, com...   331   4e-89
AB019557_1(AB019557|pid:none) Xenopus laevis mRNA for Nek2B, com...   331   4e-89
AY045701_1(AY045701|pid:none) Homo sapiens NEK2B protein kinase ...   330   6e-89
AK223353_1(AK223353|pid:none) Homo sapiens mRNA for NIMA (never ...   330   7e-89
AB168629_1(AB168629|pid:none) Macaca fascicularis testis cDNA cl...   330   7e-89
AJ719299_1(AJ719299|pid:none) Gallus gallus mRNA for hypothetica...   328   4e-88
AK147072_1(AK147072|pid:none) Mus musculus 17 days embryo heart ...   325   2e-87
BC011316_1(BC011316|pid:none) Mus musculus NIMA (never in mitosi...   325   3e-87
BC112555_1(BC112555|pid:none) Bos taurus NIMA (never in mitosis ...   323   9e-87