Dictyostelium discoideum cDNA Contig-U08367-1

Assembled

Chromosomal Location of Contig-U08367-1

Sequence Contig-U08367-1

ACTCTTGCCA CTAATAGATG TAAATTCGGA TGAAGCTTAA ACCAAATTCT
CAATCAAGCT ATGAACATTT GTGAATCCAA ATATGAAAGC AACGTTTTTA
CTCATTGCTG ATATTGCCTA TAGTTTGGGT TCAGTTTGTT TCGTTGAACC
AAATCGTAAA TTAGAGGTTG CTGAAGCTTA CTTTGCAAGA TCATTAGAAT
TAACTGAATC AAAAGTTGGT GATATGGATG TTGCTTATGC TCGTATTTTA
ACTCGTTTAG GTTCATTGAA TATTGAAAAG GATACCTATG CCGATGCAGA
GGCATTCTTT AAAGCTGCCC TTAAAATCTA TGAAGCTAGA TTGGGTATTG
ATCATTCTAG AGTTTCTCAA ATTCTTAGAC ATATGATTTC CCTCTATGAG
GTTCAAGAAA ACTATAAAAT GGCTGAACAA TGTTGTATCA GAGCTTTGGC
AATCACAAAG AAAATCTATG GTAACTCTCA TAATCTTGTA TCGGCCACTC
AAATCCGTCA AGCTTTATTA TATAATTCAA TGAATAGAAA ACAAAATTGT
CTCAATCTAT TGAATGAAGT TAAAGTTACA AGAGAGAAAG AATTTGGTCC
TGATCATAAA CAAGTTAAAC ATATTATTGA TTTAATTAAA GAAATTGATA
AACCAATCG

Translated Amino Acid Sequence Contig-U08367-1

llplidvnsdea*tkfsikl*TFVNPNMKATFLLIADIAYSLGSVCFVEPNRKLEVAEAY
FARSLELTESKVGDMDVAYARILTRLGSLNIEKDTYADAEAFFKAALKIYEARLGIDHSR
VSQILRHMISLYEVQENYKMAEQCCIRALAITKKIYGNSHNLVSATQIRQALLYNSMNRK
QNCLNLLNEVKVTREKEFGPDHKQVKHIIDLIKEIDKPI

Homology Contig-U08367-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U08367-1 (Contig-U08367-1Q) /CSM_Contig/Conti...  1306  0.0
Contig-U11686-1 (Contig-U11686-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U09865-1 (Contig-U09865-1Q) /CSM_Contig/Conti...    38  0.012
Contig-U01095-1 (Contig-U01095-1Q) /CSM_Contig/Conti...    38  0.012
Contig-U11787-1 (Contig-U11787-1Q) /CSM_Contig/Conti...    36  0.046
Contig-U11393-1 (Contig-U11393-1Q) /CSM_Contig/Conti...    36  0.046
Contig-U14022-1 (Contig-U14022-1Q) /CSM_Contig/Conti...    34  0.18
Contig-U13817-1 (Contig-U13817-1Q) /CSM_Contig/Conti...    34  0.18
Contig-U10996-1 (Contig-U10996-1Q) /CSM_Contig/Conti...    34  0.18
Contig-U10683-1 (Contig-U10683-1Q) /CSM_Contig/Conti...    34  0.18

Homology Contig-U08367-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU275241) Dictyostelium discoideum gamete cDNA clone:FC-IC1...  1267   0.0    1
(AU275240) Dictyostelium discoideum gamete cDNA clone:FC-IC1...   930   0.0    3
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ...    36   0.012  13
(CU915588) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   0.21   4
(CE606860) tigr-gss-dog-17000327561567 Dog Library Canis lup...    40   0.21   2
(ER586115) 1093015873628 Global-Ocean-Sampling_GS-36-01-01-2...    36   0.39   3
(AC178981) Strongylocentrotus purpuratus clone R3-3122G2, WO...    48   0.44   1
(DX521336) GH_MBb0026F02r GH_MBb Gossypium hirsutum genomic ...    48   0.44   1
(EC909710) gmnbbr_0008k21.pDNRm13r Gadus morhua brain librar...    38   0.45   2
(ES776147) gmnbhkic_0002a01.pDNRm13r Gadus morhua head kidne...    38   0.70   2

Homology Contig-U08367-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP000845_21(CP000845|pid:none) Acaryochloris marina MBIC11017 pl...    86   1e-15
CP000127_143(CP000127|pid:none) Nitrosococcus oceani ATCC 19707,...    84   5e-15
CP001110_413(CP001110|pid:none) Pelodictyon phaeoclathratiforme ...    82   2e-14
CP000319_3078(CP000319|pid:none) Nitrobacter hamburgensis X14, c...    81   2e-14
AM778958_334(AM778958|pid:none) Microcystis aeruginosa PCC 7806 ...    79   9e-14
CP001110_1206(CP001110|pid:none) Pelodictyon phaeoclathratiforme...    79   1e-13
BA000045_1889(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ...    79   1e-13
CP000845_60(CP000845|pid:none) Acaryochloris marina MBIC11017 pl...    78   2e-13
CP001322_1067(CP001322|pid:none) Desulfatibacillum alkenivorans ...    78   3e-13
U78597_1(U78597|pid:none) Plectonema boryanum kinesin light chai...    75   2e-12