Homology Contig-U08367-1 vs DNA
Query= Contig-U08367-1 (Contig-U08367-1Q) /CSM_Contig/Contig-U08367-1Q.Seq.d
(659 letters)
Database: ddbj_B
105,743,758 sequences; 104,622,809,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU275241) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 1267 0.0 1
(AU275240) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 930 0.0 3
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 36 0.012 13
(CU915588) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.21 4
(CE606860) tigr-gss-dog-17000327561567 Dog Library Canis lup... 40 0.21 2
(ER586115) 1093015873628 Global-Ocean-Sampling_GS-36-01-01-2... 36 0.39 3
(AC178981) Strongylocentrotus purpuratus clone R3-3122G2, WO... 48 0.44 1
(DX521336) GH_MBb0026F02r GH_MBb Gossypium hirsutum genomic ... 48 0.44 1
(EC909710) gmnbbr_0008k21.pDNRm13r Gadus morhua brain librar... 38 0.45 2
(ES776147) gmnbhkic_0002a01.pDNRm13r Gadus morhua head kidne... 38 0.70 2
(ES777685) gmnbhkic_0012c18.pDNRm13r Gadus morhua head kidne... 38 0.71 2
(CU633946) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.79 4
(EJ441971) 1093015308195 Global-Ocean-Sampling_GS-28-01-01-1... 36 1.0 3
(CR388092) Zebrafish DNA sequence from clone DKEY-285J13 in ... 46 1.7 1
(BX293996) Zebrafish DNA sequence from clone DKEY-38J20 in l... 46 1.7 1
(AL807739) Zebrafish DNA sequence from clone CH211-220F6 in ... 46 1.7 1
(AP009594) Solanum lycopersicum DNA, chromosome 8, clone: C0... 46 1.7 1
(CU463269) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.7 1
(CT573244) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 1.7 1
(EK338257) 1095467050609 Global-Ocean-Sampling_GS-31-01-01-1... 46 1.7 1
(AM607463) Entamoeba invadens IP1 GSS, clone inv079d05.q1k. 46 1.7 1
(EJ306755) 1095390099430 Global-Ocean-Sampling_GS-27-01-01-1... 46 1.7 1
(EJ214141) 1092351029299 Global-Ocean-Sampling_GS-27-01-01-1... 46 1.7 1
(DE891842) Macropus eugenii DNA, BAC clone: MEB1-068N08_F, 5... 46 1.7 1
(BZ389236) EINAJ96TF EI_10_12_KB Entamoeba invadens genomic ... 46 1.7 1
(GD717336) 454GmaGlobSeed459985 Soybean Seeds Containing Glo... 46 1.7 1
(FG151752) AGN_RNC109xc22f1.ab1 AGN_RNC Nicotiana tabacum cD... 46 1.7 1
(CP000083) Colwellia psychrerythraea 34H, complete genome. 46 1.7 1
(CU468313) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 2.3 4
(FP245529) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 3.0 7
(EJ878185) 1093018381506 Global-Ocean-Sampling_GS-30-02-01-1... 34 3.9 2
(EK157528) 1095458012038 Global-Ocean-Sampling_GS-31-01-01-1... 40 3.9 2
(EJ826701) 1093017563878 Global-Ocean-Sampling_GS-30-02-01-1... 34 4.1 2
(CR450744) Zebrafish DNA sequence from clone CH211-242F18 in... 38 5.7 3
(DX532258) GH_MBb0046F05f GH_MBb Gossypium hirsutum genomic ... 42 6.0 2
(AC210470) Oryza glaberrima clone OG_BBa0042O02, complete se... 44 6.9 1
(CU928546) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 6.9 1
(AP010046) Lotus japonicus genomic DNA, clone: LjT30N18, TM0... 44 6.9 1
(AC181670) Strongylocentrotus purpuratus clone R3-10A3, WORK... 44 6.9 1
(AC180830) Strongylocentrotus purpuratus clone R3-3071G03, W... 44 6.9 1
(BH162326) ENTQS17TR Entamoeba histolytica Sheared DNA Entam... 44 6.9 1
(BH157552) ENTRY10TR Entamoeba histolytica Sheared DNA Entam... 44 6.9 1
(AZ688933) ENTMM81TF Entamoeba histolytica Sheared DNA Entam... 44 6.9 1
(AZ678339) ENTHR01TR Entamoeba histolytica Sheared DNA Entam... 44 6.9 1
(AZ669554) ENTGL05TF Entamoeba histolytica Sheared DNA Entam... 44 6.9 1
(ER301034) 1092343683005 Global-Ocean-Sampling_GS-34-01-01-1... 44 6.9 1
(ER291712) 1092343606892 Global-Ocean-Sampling_GS-34-01-01-1... 44 6.9 1
(EK534207) 1095516020888 Global-Ocean-Sampling_GS-32-01-01-1... 44 6.9 1
(EJ755580) 1092963074955 Global-Ocean-Sampling_GS-30-02-01-1... 44 6.9 1
(EJ743432) 1092962036815 Global-Ocean-Sampling_GS-30-02-01-1... 44 6.9 1
(EJ507731) 1095407013021 Global-Ocean-Sampling_GS-28-01-01-1... 44 6.9 1
(EJ279318) 1095366041766 Global-Ocean-Sampling_GS-27-01-01-1... 44 6.9 1
(CW773307) OG_BBa0090P22.f OG_BBa Oryza glaberrima genomic c... 44 6.9 1
(CU003614) Equus caballus GSS, BAC clone CH241-71B1, T7 end ... 44 6.9 1
(EW926814) G894P5170RP17.T0 Ixodes scapularis Pooled Non-inf... 44 6.9 1
(EW868337) G894P524RN16.T0 Ixodes scapularis Pooled Non-infe... 44 6.9 1
(EW820443) G894P569RI10.T0 Ixodes scapularis Pooled Non-infe... 44 6.9 1
(FP325123) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 7.2 3
(CU856502) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 7.5 3
(CU468853) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 7.8 3
(CT956065) Zebrafish DNA sequence from clone CH211-89F22 in ... 38 7.8 4
(FP245459) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 7.9 2
(BX469903) Zebrafish DNA sequence from clone CH211-46H12 in ... 38 8.6 4
(CU672258) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 8.7 5
(CU618321) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 9.0 4
(FP102876) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 9.2 2
(AC144758) Danio rerio, complete sequence. 38 9.3 2
(FP015873) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 9.4 3
>(AU275241) Dictyostelium discoideum gamete cDNA clone:FC-IC1771, 3'
end single read.
Length = 647
Score = 1267 bits (639), Expect = 0.0
Identities = 644/646 (99%)
Strand = Plus / Plus
Query: 14 atagatgtaaattcggatgaagcttaaaccaaattctcaatcaagctatgaacatttgtg 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atagatgtaaattcggatgaagcttaaaccaaattctcaatcaagctatgaacatttgtg 60
Query: 74 aatccaaatatgaaagcaacgtttttactcattgctgatattgcctatagtttgggttca 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatccaaatatgaaagcaacgtttttactcattgctgatattgcctatagtttgggttca 120
Query: 134 gtttgtttcgttgaaccaaatcgtaaattagaggttgctgaagcttactttgcaagatca 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtttgtttcgttgaaccaaatcgtaaattagaggttgctgaagcttactttgcaagatca 180
Query: 194 ttagaattaactgaatcaaaagttggtgatatggatgttgcttatgctcgtattttaact 253
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttagnattaactgaatcaaaagttggtgatatggatgttgcttatgctcgtattttaact 240
Query: 254 cgtttaggttcattgaatattgaaaaggatacctatgccgatgcagaggcattctttaaa 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgtttaggttcattgaatattgaaaaggatacctatgccgatgcagaggcattctttaaa 300
Query: 314 gctgcccttaaaatctatgaagctagattgggtattgatcattctagagtttctcaaatt 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctgcccttaaaatctatgaagctagattgggtattgatcattctagagtttctcaaatt 360
Query: 374 cttagacatatgatttccctctatgaggttcaagaaaactataaaatggctgaacaatgt 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttagacatatgatttccctctatgaggttcaagaaaactataaaatggctgaacaatgt 420
Query: 434 tgtatcagagctttggcaatcacaaagaaaatctatggtaactctcataatcttgtatcg 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgtatcagagctttggcaatcacaaagaaaatctatggtaactctcataatcttgtatcg 480
Query: 494 gccactcaaatccgtcaagctttattatataattcaatgaatagaaaacaaaattgtctc 553
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 481 gccactcaaatccgtcaagctttattatataattcaatgaatagaaaacaagattgtctc 540
Query: 554 aatctattgaatgaagttaaagttacaagagagaaagaatttggtcctgatcataaacaa 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatctattgaatgaagttaaagttacaagagagaaagaatttggtcctgatcataaacaa 600
Query: 614 gttaaacatattattgatttaattaaagaaattgataaaccaatcg 659
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gttaaacatattattgatttaattaaagaaattgataaaccaatcg 646
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 105743758
Number of Hits to DB: 830,410,580
Number of extensions: 48238995
Number of successful extensions: 3932757
Number of sequences better than 10.0: 68
Length of query: 659
Length of database: 104,622,809,269
Length adjustment: 24
Effective length of query: 635
Effective length of database: 102,084,959,077
Effective search space: 64823949013895
Effective search space used: 64823949013895
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home