Dictyostelium discoideum cDNA Contig-U08366-1

Assembled

Chromosomal Location of Contig-U08366-1

Sequence Contig-U08366-1

ACTCTCACAT CAAAAAATAA TAAAAATAAA AAACAAATAA ATAAATAAAT
AATGGCATTA AAATATTTTA ATTATGATGT TATACATTTA GTATTATCAT
TCCTATATTT CCTTGTATCT ATATTTTGTG TATTTAGTTT TATAAAAAGA
CCTAAAAAAC AACAAAATAC ACAGCAATTC ATTTTTTATC CTCTACTCTT
TTTAGGGGTT ATAGTTAGAT CAGTATTTAT GTTTTTACAA CCATTTGTTA
GAGAAAAGTC AATAGTTATA CCAAACCAAG CTAATGTATT ATTGAATACA
TTACCATCAT TTACATTTTT TTCAACATAT TTAATAGTAT TATTTATATG
GGTAGAGATT TATATGATCT CATATGGTTC AATGATGAGA TCAATAAAGA
GTTTACCAAT CATTTTCAAT ATATCCACAT GTATTATGTA TATTGTATTG
ATAATTTTGT ATATATTGGA TTTTACATTG TATAAATTGG ACTACAGTAC
AGTCTCAACC TTTACAACAT TACCAGAGAT AATCATTGGT TATTATGATG
TTGGTTGCTT TATTTTAGCA AGTTTTTTAT TTTTATTTTT TGGTATTAGT
TTAGTAGTAA AATTTAGACA TCAACAAAAG AATTTTGCTG AAGATAAAAG
AAAAGTAATC TTACGAAGAA TCACTTTTTT AACTGGTTTA ATTTGTTGTT
GTTTCCTTTT ACGTGCTGCT ATAACTTGTT TTGCTCTTAT TGATTTACAT
TTAATTTCTG GGTATTGGTG GTGGTTTGAT GGAGCTTATT TTACAGTTTT
AGAGATTG

Translated Amino Acid Sequence Contig-U08366-1

tltsknnknkkqink*IMALKYFNYDVIHLVLSFLYFLVSIFCVFSFIKRPKKQQNTQQF
IFYPLLFLGVIVRSVFMFLQPFVREKSIVIPNQANVLLNTLPSFTFFSTYLIVLFIWVEI
YMISYGSMMRSIKSLPIIFNISTCIMYIVLIILYILDFTLYKLDYSTVSTFTTLPEIIIG
YYDVGCFILASFLFLFFGISLVVKFRHQQKNFAEDKRKVILRRITFLTGLICCCFLLRAA
ITCFALIDLHLISGYWWWFDGAYFTVLEI

Homology Contig-U08366-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U08366-1 (Contig-U08366-1Q) /CSM_Contig/Conti...   987  0.0
Contig-U13453-1 (Contig-U13453-1Q) /CSM_Contig/Conti...    36  0.057
Contig-U11045-1 (Contig-U11045-1Q) /CSM_Contig/Conti...    36  0.057
Contig-U10926-1 (Contig-U10926-1Q) /CSM_Contig/Conti...    36  0.057
Contig-U14813-1 (Contig-U14813-1Q) /CSM_Contig/Conti...    34  0.22
Contig-U14414-1 (Contig-U14414-1Q) /CSM_Contig/Conti...    34  0.22
Contig-U13241-1 (Contig-U13241-1Q) /CSM_Contig/Conti...    34  0.22
Contig-U13062-1 (Contig-U13062-1Q) /CSM_Contig/Conti...    34  0.22
Contig-U12341-1 (Contig-U12341-1Q) /CSM_Contig/Conti...    34  0.22
Contig-U12039-1 (Contig-U12039-1Q) /CSM_Contig/Conti...    34  0.22

Homology Contig-U08366-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ390940) Dictyostelium discoideum cDNA clone:dds14g12, 5' ...   496   0.0    4
(AU271870) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   424   e-149  2
(AU271871) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   430   e-147  2
(FN357473) Schistosoma mansoni genome sequence supercontig S...    36   0.087  2
(FN375732) Schistosoma mansoni genome sequence supercontig S...    36   0.099  2
(AY438025) Buchnera aphidicola (Cinara cedri) strain BCce pl...    38   0.18   2
(EJ224234) 1092351339060 Global-Ocean-Sampling_GS-27-01-01-1...    36   0.44   2
(EU254640) Plasmodium sp. P164 caseinolytic protease C (clpc...    48   0.54   1
(AC161696) Bos taurus clone CH240-108N11, WORKING DRAFT SEQU...    48   0.54   1
(AC165119) Bos taurus clone CH240-164K17, WORKING DRAFT SEQU...    34   1.1    2

Homology Contig-U08366-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AB036427_1(AB036427|pid:none) Arabidopsis thaliana mRNA for TOM3...    58   3e-07
AB057678_1(AB057678|pid:none) Arabidopsis thaliana mRNA for THH1...    56   2e-06
EU408477_1(EU408477|pid:none) Arachis hypogaea tobamovirus multi...    55   3e-06
BT052100_1(BT052100|pid:none) Medicago truncatula clone MTYF9_FA...    54   6e-06
AB193041_1(AB193041|pid:none) Solanum lycopersicum LeTH1 mRNA fo...    52   3e-05
BT038476_1(BT038476|pid:none) Zea mays full-length cDNA clone ZM...    50   1e-04
EF678108_1(EF678108|pid:none) Picea sitchensis clone WS02822_K20...    49   3e-04
BT041243_1(BT041243|pid:none) Zea mays full-length cDNA clone ZM...    48   3e-04
DQ445124_1(DQ445124|pid:none) Striga asiatica isolate St481 toba...    48   4e-04
EF569046_2(EF569046|pid:none) Campylobacter jejuni strain F2E3 p...    45   0.003