<Clone: Contig-U08330-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U08330-1

Dictyostelium discoideum cDNA Project Home

Assembled

Chromosomal Location of Contig-U08330-1

< more Chromosomal info >

Chromosome Number 2
Length 8467578
Start Poin 6,190,706
End Point 6,191,715
Strand PLUS

Sequence Contig-U08330-1

GACAATTTAG CGAAAATCAA CAAATACATT TCAAAATAAT AAAAATAAAA
AAAATGAGTG GATACGTTGG AAACCTTTCA CCAGAACAAG AACATCAATT
AGGTATTATT AAATCTAAAA TTGCAGAAAT TAATGATCCA GTTGTAGAAA
AAGAAATTCA ACAATTAGAT GATTCTATGA CCTTAAGATT TTTAAGAGCT
AGAAAATGGA ATCTAAAAGA TTCATTTGAT ATGCTCTATG AAGCATTAAA
ATTCCGAGCA ACATTTCAAG ATGTTGGAGT TGAAGGTATA ACAGAATCAA
TGGTTGTTAA TGAATTAAAG AGTGGTAAGA GTTATTTCCA TGGTGTTGAT
AAAGGTGGTA GACCAGTTTG TATTGTTAAA ACCAGTAGAC ATGATAGTTA
CAACAGAGAT TTGAATGAAT CGATGAGATA TTGTGTCTAC GTAATGGAAA
ATGGTAAATC AATGTTAAAG GACGGTATTG AAACTTGTAC ACTTATTTTC
GATATGTCTG ATTTTAGTTC AAAAAATATG GATTATCCAT TGGTTAAATT
TATGGTTGAA TTATTTCAAA AGTTTTATCC AGAATCATTA CAAAAATGTT
TAATTTTAAA TGCACCTTGG ATCTTTATGG GAATTTGGCA TATCATCAAA
CATTGGTTAG ATCCAAATAC CGCTTCAAAA GTTTCTTTTG TCAAAACTAA
ACAATTGGTT GATTATATTC CAAAAGATCA ATTAGAAAGT TCTTATGGTG
GAACAAGTAC ATTTAAATAT ACTTATGAGG GAAAAGAAGT AAAGTAAAAA
AAAAAAAAAA AAAAAAAAAA AAAAATATTT ACTTTTAAAA TATATAAATT
GTAATAACAA CAAGAACAAC AACAATAACA ATAACAATAA TAATTTCAAA
ACCAAAAAAA AACTTTATCC TTCAATTACC GAAATCTCCA CTTTTAATTA
TTTTTTTTTT TGTTTAAAAA AAATAAATAA ATAAATAAAT GTATATATAA
TTTCTTAAA

Translated Amino Acid Sequence Contig-U08330-1

<All Frames> 
QFSENQQIHFKIIKIKKMSGYVGNLSPEQEHQLGIIKSKIAEINDPVVEKEIQQLDDSMT
LRFLRARKWNLKDSFDMLYEALKFRATFQDVGVEGITESMVVNELKSGKSYFHGVDKGGR
PVCIVKTSRHDSYNRDLNESMRYCVYVMENGKSMLKDGIETCTLIFDMSDFSSKNMDYPL
VKFMVELFQKFYPESLQKCLILNAPWIFMGIWHIIKHWLDPNTASKVSFVKTKQLVDYIP
KDQLESSYGGTSTFKYTYEGKEVK*kkkkkkkkkiftfkiykl**qqeqqq*q*q**fqn
qkktlsfnyrnlhf*lffflfkknk*inkciynfl


Homology Contig-U08330-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U08330-1 (Contig-U08330-1Q) /CSM_Contig/Conti...  1469  0.0
Contig-U14683-1 (Contig-U14683-1Q) /CSM_Contig/Conti...    68  2e-11
Contig-U09174-1 (Contig-U09174-1Q) /CSM_Contig/Conti...    68  2e-11
Contig-U11815-1 (Contig-U11815-1Q) /CSM_Contig/Conti...    62  1e-09
Contig-U14435-1 (Contig-U14435-1Q) /CSM_Contig/Conti...    56  8e-08
Contig-U12846-1 (Contig-U12846-1Q) /CSM_Contig/Conti...    56  8e-08
Contig-U10968-1 (Contig-U10968-1Q) /CSM_Contig/Conti...    56  8e-08
Contig-U13900-1 (Contig-U13900-1Q) /CSM_Contig/Conti...    54  3e-07
Contig-U12176-1 (Contig-U12176-1Q) /CSM_Contig/Conti...    54  3e-07
Contig-U11436-1 (Contig-U11436-1Q) /CSM_Contig/Conti...    54  3e-07


Homology Contig-U08330-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(AU263899) Dictyostelium discoideum vegetative cDNA clone:VS...  1340   0.0    2
(AC117082) Dictyostelium discoideum chromosome 2 map complem...  1201   0.0    1
(AU263898) Dictyostelium discoideum vegetative cDNA clone:VS...   961   0.0    2
(AU037187) Dictyostelium discoideum slug cDNA, clone SSB584.      944   0.0    1
(C84903) Dictyostelium discoideum slug cDNA, clone SSE832.        571   e-158  1
(AU271663) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   535   e-147  1
(AU271525) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   535   e-147  1
(AU271524) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   535   e-147  1
(C90823) Dictyostelium discoideum slug cDNA, clone SSJ189.        402   e-122  2
(AU072546) Dictyostelium discoideum slug cDNA, clone SSE832.      369   e-110  2


Homology Contig-U08330-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


AM270115_50(AM270115|pid:none) Aspergillus niger contig An06c009...   170   8e-41
(Q10138) RecName: Full=CRAL-TRIO domain-containing protein C3H8....   166   9e-40
CR382129_654(CR382129|pid:none) Yarrowia lipolytica strain CLIB1...   154   5e-36
AM920431_638(AM920431|pid:none) Penicillium chrysogenum Wisconsi...   152   2e-35
CR382129_199(CR382129|pid:none) Yarrowia lipolytica strain CLIB1...   149   1e-34
CR382125_231(CR382125|pid:none) Kluyveromyces lactis strain NRRL...   148   3e-34
AM269993_6(AM269993|pid:none) Aspergillus niger contig An01c0470...   144   6e-33
CU928168_586(CU928168|pid:none) Kluyveromyces thermotolerans str...   140   5e-32
CR382133_199(CR382133|pid:none) Debaryomyces hansenii strain CBS...   135   2e-30
CU633865_82(CU633865|pid:none) Podospora anserina genomic DNA ch...   132   2e-29


<Clone: Contig-U08330-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

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