Dictyostelium discoideum cDNA Contig-U08163-1

Assembled

Chromosomal Location of Contig-U08163-1

Sequence Contig-U08163-1

AAAAAATTAA ATAAATAATA TACATATAAA ATGTTTTCCT CAAGAGATAA
AGCAGAAGTT AAATTATATT TTGATTCAAA CAATGAAGAA AATCAAAAAA
TTTTAGATCA ATGCCCACAT TTATATCAAA AGTATGATAA AGATGTAACA
ATAAATGATA GAATTAATAA TATTGAAGAT TCAGAACCAA CAATTAAAAA
TGGTGTTACA TTTTATCCAC CATATTATTT ATATAATTCT CATTTTATGA
ATTATTATGG TTCTTATAAA ATTCCAAAAT TAAATTTAAA AACTAGACGT
GAAATTTTAG TTAATCCAAT TGATGGTGGT ACAATTTCAT TAGACTTTTT
TGAATTAGGA GAATTTAAAG AAGATACACC AACAATTGTA ATTAATCATG
GTTTAACAGG TGGATCACAT GAACGTTATG TTCAATATTT TGCTCAACGT
GCATATAAAG AGAAAGGATT TAGAAGTGTT GTATTCAATT ATAGAGGTTG
TGCTGGTAAT CCAATTTACA GCAGACCGTG CATATAGTGC AGTTCAATTG
GATGATATTA AATTTTGTTA CAGAATATTT AACAAAAACT GCATTACCAT
TGGTAAAGAA ATGGTTTTTA GTTGGTTTTA GTTTAGGTTC TGCCATTTTA
GTCAATTATA TGGCAGACGC TGGTAAAGAC TCACCTTACT TGGCTCACGT
TTCAATTTCA AATCCAATAA ATATGGTAGA ATGTACAAAG AATCTCTCTT
CAACCTATAT CAATAATTTA ATTTATAACA AAGGTTTAGC AAATAATTTA
AAACGTTTAT TCCGTAAATT CGATGGCCGT TTAGATAAAT ATGCAACCAA
AGAACAAATT ATGGCTGCCC AAACCATTGC AGATTTCGAT GATCTTATCA
CAAGTAAAAT GTTTGGCTTC GAAACTGCTC ATGATTATTA TTTAGCCGCT
AGTAGTTCAA AGAGTATTCG TAATTTAGTT AAACCAATCC TTTTCATCAA
TGCTATCGAT GATCCAATCG CTCCAACTTC TGGTTTCCCT TGGAAAGATT
TTAAATCAAA TCCAAATACA ATCTTATGTG TTAGTAGATG GGGTGGTCAT
TTAGGTTTTA TCTCTTATGA AGATCATATG TCTTGGTCTG ATAAAGCTGC
TGTTGAATAT CTTTCAACTT TTTTAGATGA TAATAATAAT AATAANATAA
NATAATAAAA CGAATAAATA AATAAAAAAA AAAAAACAAA ATAAAAAA

Translated Amino Acid Sequence Contig-U08163-1

kik*iiyi*nvflkr*srs*iif*fkq*rksknfrsmptfiskv**rcnnk**n**y*rf
rtnn*kwcyilstilfi*fsfyellwfl*nskikfkn*t*nfs*sn*wwynfirlf*irr
i*rrytnncn*swfnrwit*tlcsifcstci*reri*kcciql*rlcw*SNLQQTVHIVQ
FNWMILNFVTEYLTKTALPLVKKWFLVGFSLGSAILVNYMADAGKDSPYLAHVSISNPIN
MVECTKNLSSTYINNLIYNKGLANNLKRLFRKFDGRLDKYATKEQIMAAQTIADFDDLIT
SKMFGFETAHDYYLAASSSKSIRNLVKPILFINAIDDPIAPTSGFPWKDFKSNPNTILCV
SRWGGHLGFISYEDHMSWSDKAAVEYLSTFLDDNNNNXIX**ne*inkkkktk*k

Homology Contig-U08163-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U08163-1 (Contig-U08163-1Q) /CSM_Contig/Conti...  2337  0.0
Contig-U01435-1 (Contig-U01435-1Q) /CSM_Contig/Conti...    46  9e-05
Contig-U01842-1 (Contig-U01842-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U13820-1 (Contig-U13820-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U11459-1 (Contig-U11459-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U01379-1 (Contig-U01379-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U11529-1 (Contig-U11529-1Q) /CSM_Contig/Conti...    38  0.022
Contig-U11472-1 (Contig-U11472-1Q) /CSM_Contig/Conti...    38  0.022
Contig-U11082-1 (Contig-U11082-1Q) /CSM_Contig/Conti...    38  0.022
Contig-U09614-1 (Contig-U09614-1Q) /CSM_Contig/Conti...    32  1.4

Homology Contig-U08163-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ344309) Dictyostelium discoideum cDNA clone:dda18h01, 3' ...  1265   0.0    2
(BJ375009) Dictyostelium discoideum cDNA clone:ddc17h04, 3' ...  1207   0.0    2
(BJ361424) Dictyostelium discoideum cDNA clone:ddc17h04, 5' ...   959   0.0    3
(AJ277590) Dictyostelium discoideum iplA gene for inositol 1...   513   e-141  1
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047...    32   0.007  15
(AL844506) Plasmodium falciparum 3D7 chromosome 7.                 40   0.022  17
(CP000361) Arcobacter butzleri RM4018, complete genome.            36   0.024  22
(AE014185) Plasmodium falciparum 3D7 chromosome 10, complete...    36   0.037  16
(AY301620) Bombyx mandarina from China mitochondrial DNA, co...    50   0.055  3
(AE014187) Plasmodium falciparum 3D7 chromosome 14, complete...    38   0.065  13

Homology Contig-U08163-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54H38) RecName: Full=Abhydrolase domain-containing protein;   ...   429   0.0
(Q40863) RecName: Full=Embryogenesis-associated protein EMB8;   ...   130   4e-41
AK175903_1(AK175903|pid:none) Arabidopsis thaliana mRNA for puta...   129   1e-40
AY087566_1(AY087566|pid:none) Arabidopsis thaliana clone 36702 m...   130   3e-40
AL049862_7(AL049862|pid:none) Arabidopsis thaliana DNA chromosom...   129   3e-40
BC046710_1(BC046710|pid:none) Xenopus laevis abhydrolase domain ...   114   3e-33
CP000589_128(CP000589|pid:none) Ostreococcus lucimarinus CCE9901...   105   7e-33
CR382128_755(CR382128|pid:none) Yarrowia lipolytica strain CLIB1...   124   9e-33
(Q0VC00) RecName: Full=Abhydrolase domain-containing protein 3; ...   103   1e-31
CP001331_462(CP001331|pid:none) Micromonas sp. RCC299 chromosome...    99   1e-31