<Clone: Contig-U06826-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U06826-1

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Assembled

Chromosomal Location of Contig-U06826-1

< more Chromosomal info >

Chromosome Number 2
Length 8467578
Start Poin 5,330,381
End Point 5,331,016
Strand PLUS

Sequence Contig-U06826-1

CAAATAGCAA CATGATTAAA AATTTAATTA TCTTTGTTTT TATTTTTAAT
TTATATATTA ATTCAGTTTA TTCAGAAATA GATATAAAAT GGAACTATTG
TCAAACTGAA AATTGTTCAG AAGATCCATC ACGTGAAACT TGCCTAAGTA
AATTATTTGA AGGTGGATCA AAATATTCAT ATATAAATAT ACCAGATTAT
CCAACCAATG TAACTGTATT AAATAAATTA TATTCATTTA CATATTATGA
AAATGAAAAA TTACTTCAAG TTAGTGGTGG ATATAATACA ACCAAACCAT
ATTCAACCAA TTATACATTT CCATTCATTG CAGAAACAAC TAACCTCTAT
GAGGATGAAA CTTGTGTAAT CATTGATCAA ACAGAATGTT ATTTAGCTGT
TGTTTGTGAT ATCAATGATA GTGATAGAAA TAAACGCTTG GCAATTGCTT
TAGGTGTAAT TTTACCAATT TTAGCTTTAT TAGTTGGGGG TTTTTGCTTT
CATTATCTAT AAAAGATATA AAAATAAAAA AGATGGTTAT TTACCAGCAA
GTACAATAGA AATTAATTAG TTTAAACAGG AAAAAAAAAA TAAAAAAATA
AAAAATNTAT TGAAAAAAAA AAANGGAAAA AAAAA

Translated Amino Acid Sequence Contig-U06826-1

<All Frames> 
NSNMIKNLIIFVFIFNLYINSVYSEIDIKWNYCQTENCSEDPSRETCLSKLFEGGSKYSY
INIPDYPTNVTVLNKLYSFTYYENEKLLQVSGGYNTTKPYSTNYTFPFIAETTNLYEDET
CVIIDQTECYLAVVCDINDSDRNKRLAIALGVILPILALLVGGFCFHYL*ki*k*krwlf
tskynrn*lv*tgkkk*knkkxiekkkxkkk


Homology Contig-U06826-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U06826-1 (Contig-U06826-1Q) /CSM_Contig/Conti...   954  0.0
Contig-U11200-1 (Contig-U11200-1Q) /CSM_Contig/Conti...    36  0.044
Contig-U06101-1 (Contig-U06101-1Q) /CSM_Contig/Conti...    36  0.044
Contig-U04596-1 (Contig-U04596-1Q) /CSM_Contig/Conti...    36  0.044
Contig-U01712-1 (Contig-U01712-1Q) /CSM_Contig/Conti...    36  0.044
Contig-U13971-1 (Contig-U13971-1Q) /CSM_Contig/Conti...    34  0.18
Contig-U13789-1 (Contig-U13789-1Q) /CSM_Contig/Conti...    34  0.18
Contig-U12213-1 (Contig-U12213-1Q) /CSM_Contig/Conti...    34  0.18
Contig-U12088-1 (Contig-U12088-1Q) /CSM_Contig/Conti...    34  0.18
Contig-U12082-1 (Contig-U12082-1Q) /CSM_Contig/Conti...    34  0.18


Homology Contig-U06826-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(AU269404) Dictyostelium discoideum vegetative cDNA clone:VS...   886   0.0    2
(AU266842) Dictyostelium discoideum vegetative cDNA clone:VS...   266   e-103  3
(AX926713) Sequence 3 from Patent WO03084989.                      40   0.048  6
(AC235904) Glycine max strain Williams 82 clone GM_WBc0179J0...    44   0.072  4
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    36   0.078  8
(AX392733) Sequence 23 from Patent WO0212526.                      36   0.27   7
(AR707080) Sequence 23 from patent US 6933145.                     36   0.27   7
(AL844508) Plasmodium falciparum 3D7 chromosome 9.                 34   0.29   11
(CE683601) tigr-gss-dog-17000314484406 Dog Library Canis lup...    38   0.32   2
(AL954718) Zebrafish DNA sequence from clone CH211-273E20 in...    48   0.42   1


Homology Contig-U06826-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


(P57429) RecName: Full=Ribonuclease E;          Short=RNase E;  ...    39   0.16
BC172832_1(BC172832|pid:none) Synthetic construct Mus musculus c...    37   0.62
CP000724_3755(CP000724|pid:none) Alkaliphilus metalliredigens QY...    35   1.8
CP000446_3101(CP000446|pid:none) Shewanella sp. MR-4, complete g...    34   4.0
EF494740_6(EF494740|pid:none) Blastocystis sp. NandII mitochondr...    33   6.8
CP001348_328(CP001348|pid:none) Clostridium cellulolyticum H10, ...    33   8.9


<Clone: Contig-U06826-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

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