Dictyostelium discoideum cDNA Contig-U06738-1

Assembled

Chromosomal Location of Contig-U06738-1

Sequence Contig-U06738-1

CAATTTAAAA AAAAATACTA ATTTTCAATC AAATATTATT TCATTGTGTG
TTTTATTTTT TAAAGGTTAG TAATAATTAT TATTATATAA ATACAAGTTT
ATTATATATC TATTTCTTTA TCGTGAATAT TCATACAAGC ACACACTCAC
ACTTTTATAA TATTGTGGTA CAATATTGCA TTATTATATT TATTATTTTG
ATACAACACC ACACTAAATA TACTACAAAA ATTTTTTTTT GGGAAGGAAT
TAAAAAAAAA

Translated Amino Acid Sequence Contig-U06738-1

i*KKILIFNQILFHCVFYFLKVSNNYYYINTSLLYIYFFIVNIHTSTHSHFYNIVVQYCI
IIFIILIQHHTKYTTKIFFWEGIKKK

Homology Contig-U06738-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U06738-1 (Contig-U06738-1Q) /CSM_Contig/Conti...   242  2e-64
Contig-U06795-1 (Contig-U06795-1Q) /CSM_Contig/Conti...    40  0.001
Contig-U01854-1 (Contig-U01854-1Q) /CSM_Contig/Conti...    38  0.004
Contig-U14443-1 (Contig-U14443-1Q) /CSM_Contig/Conti...    36  0.018
Contig-U11921-1 (Contig-U11921-1Q) /CSM_Contig/Conti...    36  0.018
Contig-U10618-1 (Contig-U10618-1Q) /CSM_Contig/Conti...    36  0.018
Contig-U06753-1 (Contig-U06753-1Q) /CSM_Contig/Conti...    36  0.018
Contig-U06328-1 (Contig-U06328-1Q) /CSM_Contig/Conti...    36  0.018
Contig-U13576-1 (Contig-U13576-1Q) /CSM_Contig/Conti...    34  0.070
Contig-U10506-1 (Contig-U10506-1Q) /CSM_Contig/Conti...    30  1.1

Homology Contig-U06738-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU265628) Dictyostelium discoideum vegetative cDNA clone:VS...   198   6e-61  2
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117...   198   2e-58  2
(AU265629) Dictyostelium discoideum vegetative cDNA clone:VS...    70   4e-08  1
(AZ522935) 213PbE01 Pb MBN #21 Plasmodium berghei genomic 3'...    42   0.034  2
(FF320086) 280405843 Pea aphid whole body normalized full le...    38   0.13   2
(AC187519) Pan troglodytes BAC clone CH251-634N6 from chromo...    48   0.16   1
(AC146126) Pan troglodytes BAC clone RP43-23E20 from chromos...    48   0.16   1
(AC073125) Homo sapiens BAC clone RP11-636L15 from 7, comple...    48   0.16   1
(AC136302) Homo sapiens chromosome 15 clone CTD-2556C14 map ...    48   0.16   1
(FP236812) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    48   0.16   1

Homology Contig-U06738-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AL844509_567(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    37   0.28
CP000939_359(CP000939|pid:none) Clostridium botulinum B1 str. Ok...    33   4.0
DQ927304_24(DQ927304|pid:none) Tetrahymena paravorax strain RP m...    33   4.0
AE014187_405(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    32   6.9
(Q54LB7) RecName: Full=Putative uncharacterized transmembrane pr...    32   6.9
AP009180_93(AP009180|pid:none) Candidatus Carsonella ruddii PV D...    32   9.0