Dictyostelium discoideum cDNA Contig-U06627-1

Assembled

Chromosomal Location of Contig-U06627-1

Sequence Contig-U06627-1

TTTAATTTAA ACACATTCAT ATTAAATGTT AAGAAAAATG GAAACAGTTA
TTAAAGCACT TGCTGAAAAT AAAATCTCTG ATGTTATTTC TTTTACACCA
AAGAAATTAT TAACAGTTAA ATACAATGGT AAAGAATTAA ATATTAATGA
TACATTAACA CCAACAATTG TCCAAAATAA ACCACATGTA TCATGGGATG
CCAAAAATGA TGAATTATAT ACTTTAATTT TTGATGACCC AGATGCACCA
ACCAGATCTG ATCCAAAATT CGGTCAATGG AAACATTGGT TAGTAACCAA
CATTAAAGGT AATGATATTT CAACTGGTCA AGAATTAGCT AAATACATTG
GATCAGGTCC ACCACCAAAA ACTGGTTTAC ACAGATACAT TTTCATCTTA
TGTAAACAAC CAGGTACTGA AAATATTGAA TTCAAAGGAG AACATATTTT
ACCACTTTCA GCTGAATTAA GAAATAATTG GAATGCTGAA ACTTTCATTA
AAAAATGGAA TTTAGAACCA GAAGCTATCA ACTTTTATCA AGCTGAATAT
GATGATTATG TTCCACAACT CTATGCCAAA TTAGGTGAAA CTCAAGATAA
ACCAGTTGAA ATTAAATAAA CAATTATTCA ATATTCAACA TTAACAAATA
AGTAAATAAA GAAATTACCA AAAAATTTCC TTATTTGAAA ATAATAAATA
AATTAATAAA TAGATAATAA TAAATAATAA TTAAAAAAAA AAAAAA

Translated Amino Acid Sequence Contig-U06627-1

li*thsy*MLRKMETVIKALAENKISDVISFTPKKLLTVKYNGKELNINDTLTPTIVQNK
PHVSWDAKNDELYTLIFDDPDAPTRSDPKFGQWKHWLVTNIKGNDISTGQELAKYIGSGP
PPKTGLHRYIFILCKQPGTENIEFKGEHILPLSAELRNNWNAETFIKKWNLEPEAINFYQ
AEYDDYVPQLYAKLGETQDKPVEIK*tiiqystltnk*ikklpknfli*k**in**idnn
k**lkkkk

Homology Contig-U06627-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U06627-1 (Contig-U06627-1Q) /CSM_Contig/Conti...  1279  0.0
Contig-U06694-1 (Contig-U06694-1Q) /CSM_Contig/Conti...   200  2e-51
Contig-U07016-1 (Contig-U07016-1Q) /CSM_Contig/Conti...    38  0.013
Contig-U14187-1 (Contig-U14187-1Q) /CSM_Contig/Conti...    36  0.052
Contig-U13236-1 (Contig-U13236-1Q) /CSM_Contig/Conti...    36  0.052
Contig-U11064-1 (Contig-U11064-1Q) /CSM_Contig/Conti...    36  0.052
Contig-U10976-1 (Contig-U10976-1Q) /CSM_Contig/Conti...    36  0.052
Contig-U10422-1 (Contig-U10422-1Q) /CSM_Contig/Conti...    36  0.052
Contig-U03836-1 (Contig-U03836-1Q) /CSM_Contig/Conti...    36  0.052
Contig-U00230-1 (Contig-U00230-1Q) /CSM_Contig/Conti...    36  0.052

Homology Contig-U06627-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU266819) Dictyostelium discoideum vegetative cDNA clone:VS...   846   0.0    1
(AU263016) Dictyostelium discoideum vegetative cDNA clone:VS...   809   0.0    1
(AU265049) Dictyostelium discoideum vegetative cDNA clone:VS...   200   6e-47  1
(AU265050) Dictyostelium discoideum vegetative cDNA clone:VS...   184   3e-42  1
(DR109069) USDA-FP_166332 5th-instar Anoplophora glabripenni...    48   8e-07  3
(EX627269) 255442313 Pea aphid whole body normalized full le...    56   0.002  1
(AC116960) Dictyostelium discoideum chromosome 2 map complem...    36   0.014  9
(AC115659) Rattus norvegicus clone CH230-361G14, WORKING DRA...    42   0.021  2
(ES599166) BPE00000461 Buddenbrockia plumatellae SMART cDNA ...    44   0.073  2
(AC178867) Strongylocentrotus purpuratus clone R3-26P12, WOR...    48   0.10   3

Homology Contig-U06627-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


DQ443265_1(DQ443265|pid:none) Bombyx mori phosphatidylethanolami...   181   2e-44
DQ443264_1(DQ443264|pid:none) Bombyx mori phosphatidylethanolami...   179   8e-44
AY264806_1(AY264806|pid:none) Branchiostoma belcheri tsingtaunes...   168   2e-40
(O16264) RecName: Full=Phosphatidylethanolamine-binding protein ...   166   7e-40
AF016423_4(AF016423|pid:none) Caenorhabditis elegans cosmid F40A...   166   7e-40
AY608669_1(AY608669|pid:none) Branchiostoma belcheri tsingtaunes...   165   1e-39
AE014297_442(AE014297|pid:none) Drosophila melanogaster chromoso...   160   4e-38
DQ440356_1(DQ440356|pid:none) Aedes aegypti clone AET-458 phosph...   159   1e-37
AY187040_1(AY187040|pid:none) Anopheles gambiae putative antenna...   158   1e-37
AE014134_2320(AE014134|pid:none) Drosophila melanogaster chromos...   155   1e-36