Homology Contig-U06627-1 vs DNA
Query= Contig-U06627-1 (Contig-U06627-1Q) /CSM_Contig/Contig-U06627-1Q.Seq.d
(746 letters)
Database: ddbj_B
105,743,758 sequences; 104,622,809,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU266819) Dictyostelium discoideum vegetative cDNA clone:VS... 846 0.0 1
(AU263016) Dictyostelium discoideum vegetative cDNA clone:VS... 809 0.0 1
(AU265049) Dictyostelium discoideum vegetative cDNA clone:VS... 200 6e-47 1
(AU265050) Dictyostelium discoideum vegetative cDNA clone:VS... 184 3e-42 1
(DR109069) USDA-FP_166332 5th-instar Anoplophora glabripenni... 48 8e-07 3
(EX627269) 255442313 Pea aphid whole body normalized full le... 56 0.002 1
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 36 0.014 9
(AC115659) Rattus norvegicus clone CH230-361G14, WORKING DRA... 42 0.021 2
(ES599166) BPE00000461 Buddenbrockia plumatellae SMART cDNA ... 44 0.073 2
(AC178867) Strongylocentrotus purpuratus clone R3-26P12, WOR... 48 0.10 3
(AC019116) Homo sapiens BAC clone RP11-506M2 from 2, complet... 50 0.13 1
(AC069452) Homo sapiens chromosome 2 clone RP11-47K18 map 2,... 50 0.13 1
(ED039455) AUAC-aat90f12.b1 Ascaris suum whole genome shotgu... 50 0.13 1
(BG225654) kp70d01.y1 TBN95TM-SSFH Strongyloides stercoralis... 50 0.13 1
(CR388137) Zebrafish DNA sequence from clone DKEY-17M13 in l... 38 0.25 6
(AC110818) Mus musculus BAC clone RP23-198H8 from 16, comple... 38 0.28 2
(ED995457) MUGQ_CH252P177J22Sp6_CN245_087 CHORI-252 Vervet M... 38 0.30 2
(CU633420) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.50 1
(CU466937) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.50 1
(AC201586) Strongylocentrotus purpuratus clone R3-4016D23, W... 48 0.50 1
(AC178415) Strongylocentrotus purpuratus clone R3-3113A21, W... 48 0.50 1
(AC176761) Strongylocentrotus purpuratus clone R3-3097N7, WO... 48 0.50 1
(AC174031) Bos taurus clone CH240-90H12, WORKING DRAFT SEQUE... 48 0.50 1
(AC173355) Strongylocentrotus purpuratus clone R3-1024A12, W... 48 0.50 1
(BZ831671) CH240_287G2.TJ CHORI-240 Bos taurus genomic clone... 48 0.50 1
(ES221013) MpGV_ag2_E22 Myzus persicae, line G006, PLRV infe... 48 0.50 1
(EE571195) D11_D11fv2n22_pDNRf_530923 Myzus persicae, line F... 48 0.50 1
(EE570108) B01_B01fm3i2_pDNRf_532665 Myzus persicae, line F0... 48 0.50 1
(EE264112) E10_E10gf4g19_pDNRf_505760 Myzus persicae, line G... 48 0.50 1
(EE262402) C12_C12fm1b23_pDNRf_520613 Myzus persicae, line F... 48 0.50 1
(EC389802) E01_E01h2k1_pDNRf_473398 Myzus persicae, tobacco ... 48 0.50 1
(DV745523) ID0AAG2DA11CM1 ID0AAG Acyrthosiphon pisum cDNA cl... 48 0.50 1
(DV742820) ID0AFF8AG08CM1 ID0AFF Acyrthosiphon pisum cDNA cl... 48 0.50 1
(DV095692) 327-384-57_O10_M13-FP Nematostella vectensis norm... 48 0.50 1
(CV831405) ID0ACC18AH12RM1 ID0ACC Acyrthosiphon pisum cDNA c... 48 0.50 1
(CN582239) USDA-FP_125301 Acyrthosiphon pisum, Pea Aphid Acy... 48 0.50 1
(CN582091) USDA-FP_125153 Acyrthosiphon pisum, Pea Aphid Acy... 48 0.50 1
(CK241621) rx31g07.y1 Meloidogyne paranaensis egg SL1 pGEM M... 48 0.50 1
(BP536815) Acyrthosiphon pisum cDNA clone:BCA019054, 5 prime... 48 0.50 1
(BP535892) Acyrthosiphon pisum cDNA clone:BCA005058, 5 prime... 48 0.50 1
(BP535595) Acyrthosiphon pisum cDNA clone:BCA001072, 5 prime... 48 0.50 1
(BP153836) Sus scrofa mRNA, clone:OVRM10092H02, 5' end, expr... 48 0.50 1
(FF330112) 280443264 Pea aphid whole body normalized full le... 48 0.50 1
(FF329878) 280441807 Pea aphid whole body normalized full le... 48 0.50 1
(FF327014) 280431512 Pea aphid whole body normalized full le... 48 0.50 1
(FF325612) 280427431 Pea aphid whole body normalized full le... 48 0.50 1
(FF318782) 280398018 Pea aphid whole body normalized full le... 48 0.50 1
(FF317023) 280391351 Pea aphid whole body normalized full le... 48 0.50 1
(FF314910) 279397893 Pea aphid whole body normalized full le... 48 0.50 1
(FF314194) 279391988 Pea aphid whole body normalized full le... 48 0.50 1
(FF309518) 279375469 Pea aphid whole body normalized full le... 48 0.50 1
(FF308636) 279372144 Pea aphid whole body normalized full le... 48 0.50 1
(FF300259) 279336453 Pea aphid whole body normalized full le... 48 0.50 1
(FF299854) 279331173 Pea aphid whole body normalized full le... 48 0.50 1
(FF298835) 279325547 Pea aphid whole body normalized full le... 48 0.50 1
(FF298824) 279325433 Pea aphid whole body normalized full le... 48 0.50 1
(FF292799) 279288523 Pea aphid whole body normalized full le... 48 0.50 1
(FD464194) LARW424TF Haematobia irritans 1st Instar Larvae H... 48 0.50 1
(FC244798) CAGH3345.fwd CAGH Nematostella vectensis Nemve La... 48 0.50 1
(FC244797) CAGH3345.rev CAGH Nematostella vectensis Nemve La... 48 0.50 1
(EX645929) 256683154 Pea aphid whole body normalized full le... 48 0.50 1
(EX637301) 256615078 Pea aphid whole body normalized full le... 48 0.50 1
(EX630884) 255478077 Pea aphid whole body normalized full le... 48 0.50 1
(EX625762) 255432349 Pea aphid whole body normalized full le... 48 0.50 1
(EX624826) 255429374 Pea aphid whole body normalized full le... 48 0.50 1
(EX624282) 255427464 Pea aphid whole body normalized full le... 48 0.50 1
(EX621661) 255417532 Pea aphid whole body normalized full le... 48 0.50 1
(EX618828) 255407105 Pea aphid whole body normalized full le... 48 0.50 1
(EX617460) 255397873 Pea aphid whole body normalized full le... 48 0.50 1
(EX615847) 255394891 Pea aphid whole body normalized full le... 48 0.50 1
(EX613517) 255383090 Pea aphid whole body normalized full le... 48 0.50 1
(EX613007) 255383109 Pea aphid whole body normalized full le... 48 0.50 1
(EX611435) 255375225 Pea aphid whole body normalized full le... 48 0.50 1
(CP000102) Methanosphaera stadtmanae DSM 3091, complete genome. 34 0.51 17
(FD663813) TransId-115555 HhtracL2BTEIII Hypothenemus hampei... 44 0.94 2
(EK094843) 1092962028374 Global-Ocean-Sampling_GS-31-01-01-1... 36 1.2 2
(ER363224) 1093018906258 Global-Ocean-Sampling_GS-34-01-01-1... 36 1.3 2
(EH011266) USDA-FP_184282 Lysiphlebus testaceipes adult whol... 34 1.3 3
(AC127684) Mus musculus BAC clone RP24-171J12 from chromosom... 36 1.3 4
(AZ686406) ENTLC78TR Entamoeba histolytica Sheared DNA Entam... 42 1.4 2
(EH005578) AsEST084 Anisakis simplex 3rd stage larva cDNA li... 44 1.4 2
(ER467417) 1092963930519 Global-Ocean-Sampling_GS-35-01-01-1... 36 1.4 2
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 34 1.4 9
(FP003593) Zebrafish DNA sequence from clone CH73-156E19 in ... 36 1.4 6
(DV780777) Hw_Fat_56_050802_G01 Bos taurus CF-24-HW fat cDNA... 36 1.6 2
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 32 1.7 12
(CR936263) Zebrafish DNA sequence from clone DKEYP-36F6 in l... 46 2.0 1
(BX649300) Zebrafish DNA sequence from clone CH211-195I16 in... 46 2.0 1
(AC147178) Medicago truncatula clone mth2-142i4, complete se... 46 2.0 1
(CS465100) Sequence 47 from Patent WO2006127310. 46 2.0 1
(AC156956) Bos taurus clone CH240-71A13, WORKING DRAFT SEQUE... 46 2.0 1
(AC106673) Rattus norvegicus clone CH230-108J3, WORKING DRAF... 46 2.0 1
(AC097388) Rattus norvegicus clone CH230-8O5, WORKING DRAFT ... 46 2.0 1
(CU972469) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.0 1
(CR762394) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 2.0 1
(AC234406) Solanum lycopersicum chromosome 7 clone C07SLe006... 46 2.0 1
(AC225458) Medicago truncatula clone mth2-161l3, WORKING DRA... 46 2.0 1
(AC212610) Solanum lycopersicum chromosome 7 clone C07HBa003... 46 2.0 1
(EJ504307) 1095403674833 Global-Ocean-Sampling_GS-28-01-01-1... 46 2.0 1
(EJ168693) 1092344075398 Global-Ocean-Sampling_GS-27-01-01-1... 46 2.0 1
(DX120181) OG_ABa0146K18.f OG_ABa Oryza granulata genomic cl... 46 2.0 1
(CB421198) 594205 MARC 6BOV Bos taurus cDNA 5', mRNA sequence. 46 2.0 1
(EX625029) 255431874 Pea aphid whole body normalized full le... 46 2.0 1
(EW770081) ST020021B10H01 Normalized and subtracted western ... 46 2.0 1
(Z33369) M.capricolum DNA for CONTIG MCABG. 46 2.0 1
(M91593) Mycoplasma mycoides SRPM54 gene, complete cds. 46 2.0 1
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 46 2.0 1
(EK553304) 1095516136753 Global-Ocean-Sampling_GS-32-01-01-1... 34 2.1 3
(AL713959) Zebrafish DNA sequence from clone XX-158F24 in li... 44 2.2 2
(AC235641) Solanum tuberosum strain Diploid genotype RH89-03... 38 2.2 4
(CT795691) Paramecium tetraurelia 5-PRIME EST from clone LK0... 40 2.3 2
(EX550883) AIAC-aab11c07.b1 Ancylostoma_caninum_EST_Male_pSM... 40 2.4 2
(AC219759) Bos taurus clone CH240-323H19, WORKING DRAFT SEQU... 36 3.3 5
(EX553225) AIAE-aaa37f05.b1 Ancylostoma_caninum_EST_Female_p... 40 3.4 2
(AC099538) Homo sapiens chromosome 3 clone RP11-90I9, comple... 32 3.4 10
(EX553721) AIAE-aaa37f05.g1 Ancylostoma_caninum_EST_Female_p... 40 3.7 2
(EB487732) 1099341208313 12-DrosW-norm-1P5Kb Drosophila will... 40 3.9 2
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 30 4.0 11
(EB485637) 1099289030693 12-DrosW-norm-1P5Kb Drosophila will... 40 4.1 2
(EJ163140) 1092344056221 Global-Ocean-Sampling_GS-27-01-01-1... 34 4.1 2
(CK952373) 4091909 BARC 10BOV Bos taurus cDNA clone 10BOV29_... 34 4.2 2
(CW396790) fsbb001f085g08f0 Sorghum methylation filtered lib... 40 4.2 2
(EJ180834) 1092344122351 Global-Ocean-Sampling_GS-27-01-01-1... 34 4.2 2
(EB485874) 1099289031461 12-DrosW-norm-1P5Kb Drosophila will... 40 4.5 2
(FF328281) 280436680 Pea aphid whole body normalized full le... 42 4.5 2
(AC183990) Pan troglodytes BAC clone CH251-134O11 from chrom... 40 5.0 6
(DY892397) CeleSEQ10614 Cunninghamella elegans pBluescript (... 32 5.1 2
(EK256859) 1095462014791 Global-Ocean-Sampling_GS-31-01-01-1... 32 5.1 2
(CU651567) M.truncatula DNA sequence from clone MTE1-64C6 on... 34 5.2 5
(FK819822) yplc_13_A11 Yellow perch control liver library Pe... 36 5.2 2
(AC235354) Glycine max strain Williams 82 clone GM_WBb0094M1... 36 5.3 6
(AP010183) Lotus japonicus genomic DNA, chromosome 5, clone:... 44 5.9 3
(AX345368) Sequence 439 from Patent WO0200928. 36 6.6 3
(CK836211) 4061275 BARC 8BOV Bos taurus cDNA clone 8BOV_16H1... 34 7.1 2
(EE778603) 020314OMGB1003004HT OMGB1 Ovis aries cDNA, mRNA s... 34 7.1 2
(EE777909) 020502OMGB11005047HT OMGB1 Ovis aries cDNA, mRNA ... 34 7.1 2
(EK523401) 1095515633490 Global-Ocean-Sampling_GS-32-01-01-1... 32 7.3 3
(AC140815) Homo sapiens chromosome 16 clone RP11-633D14, WOR... 32 7.6 7
(CN654054) UMC-bcl_0A02-001-b10 Day 16 Corpus luteum from a ... 34 7.7 2
(GF085343) pRRL2:Newb:20080411:95587 USMARC Pig Breed SNP Di... 44 7.8 1
(CT030658) Mouse DNA sequence from clone RP23-238H20 on chro... 44 7.8 1
(AC079748) Homo sapiens BAC clone RP11-6C14 from 4, complete... 44 7.8 1
(AC151937) Dasypus novemcinctus clone VMRC5-169K3, WORKING D... 44 7.8 1
(AC151643) Dasypus novemcinctus clone VMRC5-220N15, WORKING ... 44 7.8 1
(AC102962) Rattus norvegicus clone CH230-170B17, *** SEQUENC... 44 7.8 1
(CU469228) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 7.8 1
(AC048333) Homo sapiens chromosome 3 clone RP11-359D11, WORK... 44 7.8 1
(AC232838) Choloepus hoffmanni clone CH281-467M13, WORKING D... 44 7.8 1
(AC219351) Bos taurus clone CH240-338C20, WORKING DRAFT SEQU... 44 7.8 1
(AC214691) Echinops telfairi clone CH238-353F22, WORKING DRA... 44 7.8 1
(AC175212) Echinops telfairi clone CH238-334C12, WORKING DRA... 44 7.8 1
(AC171419) Bos taurus clone CH240-300K10, WORKING DRAFT SEQU... 44 7.8 1
(FH180037) CHO_OF3415xj10f1.ab1 CHO_OF3 Nicotiana tabacum ge... 44 7.8 1
(EK150724) 1095456049903 Global-Ocean-Sampling_GS-31-01-01-1... 44 7.8 1
(EI943542) akm3ag32f Km3-3010m-Ionian Sea marine metagenome ... 44 7.8 1
(DH271433) Oryzias latipes Fosmid clone:GOLWFno603_e07, forw... 44 7.8 1
(DH237983) Oryzias latipes Fosmid clone:GOLWFno509_j06, forw... 44 7.8 1
(CC500452) CH240_338C20.TARBAC13P2 CHORI-240 Bos taurus geno... 44 7.8 1
(DY777491) Sf1F06658-5-1 Spodoptera frugiperda Fat Body cDNA... 44 7.8 1
(DY777412) Sf1F06562-3-1 Spodoptera frugiperda Fat Body cDNA... 44 7.8 1
(DY777307) Sf1F06365-3-1 Spodoptera frugiperda Fat Body cDNA... 44 7.8 1
(DY776342) Sf1F04695-3-1 Spodoptera frugiperda Fat Body cDNA... 44 7.8 1
(BY437457) Mus musculus 17 days embryo stomach cDNA, RIKEN f... 44 7.8 1
(GO203382) CAGB19522.fwd CAGB Alvinella pompejana Normalized... 44 7.8 1
(GO197197) CAGB16559.fwd CAGB Alvinella pompejana Normalized... 44 7.8 1
(GO132577) CAGA25257.rev CAGA Alvinella pompejana Normalized... 44 7.8 1
(EW769196) ST020018B20F01 Normalized and subtracted western ... 44 7.8 1
(EW762396) ST040011B20F09 Normalized and subtracted western ... 44 7.8 1
(CP000685) Flavobacterium johnsoniae UW101, complete genome. 44 7.8 1
(CK779537) UMC-bend_0A02-013-c01 Day 8 Uterus bend Bos tauru... 34 7.9 2
(DY069013) 000408BAGA003836HT BAGA Bos taurus cDNA 5', mRNA ... 34 7.9 2
(EV666005) LB03419.CR_G14 GC_BGC-34 Bos taurus cDNA clone IM... 34 8.0 2
(AU097800) Bos taurus cDNA clone:Cln92, 3' end, expressed in... 34 8.0 2
(CO877182) BovGen_05507 normal cattle brain Bos taurus cDNA ... 34 8.0 2
(CO874302) BovGen_02627 normal cattle brain Bos taurus cDNA ... 34 8.0 2
(CK983077) UMC-bend_0B01-004-g04 Day 5 Uterus bend Bos tauru... 34 8.0 2
(CK816821) UMC-bend_0B01-013-c02 Day 8 Uterus bend Bos tauru... 34 8.1 2
(EV734365) LB03419.C21_G14 GC_BGC-34 Bos taurus cDNA clone I... 34 8.4 2
(DY516824) sh3P0035N12_F.ab1 adult sheep fracture callus 10d... 34 8.5 2
(AC212671) Pongo abelii BAC clone CH276-197J20 from chromoso... 38 8.5 7
(AL413949) T7 end of clone AW0AA028A01 of library AW0AA from... 34 8.6 3
(BU955513) AGENCOURT_10612714 NIH_MGC_126 Homo sapiens cDNA ... 34 8.6 2
(BG223922) 1M0022F06a Bovine Mixed Skeletal Muscle cDNA Libr... 34 9.0 2
(CP001440) Borrelia valaisiana VS116 plasmid VS116_lp28-3, c... 32 9.1 6
(AC201478) Strongylocentrotus purpuratus clone R3-3055D10, W... 36 9.2 3
(DN822836) UMC-bemiv_0B02-027-g11 In vitro derived blastocys... 34 9.3 2
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 34 9.4 17
(AC016677) Homo sapiens chromosome 11 clone RP11-54J7, WORKI... 38 9.9 6
(AJ688123) Bos taurus EST, clone KN261-047_I22. 34 10.0 2
(CU633924) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 10.0 5
>(AU266819) Dictyostelium discoideum vegetative cDNA clone:VSG793,
5' end single read.
Length = 427
Score = 846 bits (427), Expect = 0.0
Identities = 427/427 (100%)
Strand = Plus / Plus
Query: 1 tttaatttaaacacattcatattaaatgttaagaaaaatggaaacagttattaaagcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttaatttaaacacattcatattaaatgttaagaaaaatggaaacagttattaaagcact 60
Query: 61 tgctgaaaataaaatctctgatgttatttcttttacaccaaagaaattattaacagttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgctgaaaataaaatctctgatgttatttcttttacaccaaagaaattattaacagttaa 120
Query: 121 atacaatggtaaagaattaaatattaatgatacattaacaccaacaattgtccaaaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atacaatggtaaagaattaaatattaatgatacattaacaccaacaattgtccaaaataa 180
Query: 181 accacatgtatcatgggatgccaaaaatgatgaattatatactttaatttttgatgaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accacatgtatcatgggatgccaaaaatgatgaattatatactttaatttttgatgaccc 240
Query: 241 agatgcaccaaccagatctgatccaaaattcggtcaatggaaacattggttagtaaccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agatgcaccaaccagatctgatccaaaattcggtcaatggaaacattggttagtaaccaa 300
Query: 301 cattaaaggtaatgatatttcaactggtcaagaattagctaaatacattggatcaggtcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cattaaaggtaatgatatttcaactggtcaagaattagctaaatacattggatcaggtcc 360
Query: 361 accaccaaaaactggtttacacagatacattttcatcttatgtaaacaaccaggtactga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 accaccaaaaactggtttacacagatacattttcatcttatgtaaacaaccaggtactga 420
Query: 421 aaatatt 427
|||||||
Sbjct: 421 aaatatt 427
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 105743758
Number of Hits to DB: 1,021,226,757
Number of extensions: 64282932
Number of successful extensions: 5409679
Number of sequences better than 10.0: 191
Length of query: 746
Length of database: 104,622,809,269
Length adjustment: 24
Effective length of query: 722
Effective length of database: 102,084,959,077
Effective search space: 73705340453594
Effective search space used: 73705340453594
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home