Homology Contig-U06402-1 vs Protein
Query= Contig-U06402-1 (Contig-U06402-1Q) /CSM_Contig/Contig-U06402-1Q.Seq.d
(819 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR382132_938(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 86 2e-29
FM992694_149(FM992694|pid:none) Candida dubliniensis CD36 chromo... 63 1e-20
AP006852_153(AP006852|pid:none) Candida albicans genomic DNA, ch... 60 9e-20
AX023756_1(AX023756|pid:none) Sequence 13 from Patent EP0999284. 60 9e-20
CP000497_570(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 63 1e-19
CU928174_411(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 74 1e-18
(P53929) RecName: Full=Uncharacterized protein YNL108C; &CS5595... 60 2e-17
FN392322_389(FN392322|pid:none) Pichia pastoris GS115 chromosome... 60 3e-17
CR380955_116(CR380955|pid:none) Candida glabrata strain CBS138 c... 68 3e-17
AE016819_10(AE016819|pid:none) Ashbya gossypii (= Eremothecium g... 55 3e-16
CP001287_259(CP001287|pid:none) Cyanothece sp. PCC 8801, complet... 87 5e-16
(Q12415) RecName: Full=Transcription factor tau 55 kDa subunit; ... 58 5e-16
AY692910_1(AY692910|pid:none) Saccharomyces cerevisiae clone FLH... 58 5e-16
CP000393_1831(CP000393|pid:none) Trichodesmium erythraeum IMS101... 86 1e-15
CR380948_194(CR380948|pid:none) Candida glabrata strain CBS138 c... 55 4e-14
FJ477836_15(FJ477836|pid:none) Oscillatoria sp. PCC 6506 anatoxi... 81 5e-14
CP000117_932(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 79 2e-13
AE2177(AE2177) hypothetical protein alr2972 [imported] - Nostoc ... 76 1e-12
CP000828_682(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 74 4e-12
CR382133_224(CR382133|pid:none) Debaryomyces hansenii strain CBS... 66 1e-09
AE017353_235(AE017353|pid:none) Cryptococcus neoformans var. neo... 49 3e-09
CU633900_295(CU633900|pid:none) Podospora anserina genomic DNA c... 50 2e-07
CP000159_1910(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 58 4e-07
AF040659_7(AF040659|pid:none) Caenorhabditis elegans cosmid ZK48... 55 2e-06
CR382127_248(CR382127|pid:none) Yarrowia lipolytica strain CLIB1... 55 4e-06
AK049106_1(AK049106|pid:none) Mus musculus ES cells cDNA, RIKEN ... 54 6e-06
AP009493_5214(AP009493|pid:none) Streptomyces griseus subsp. gri... 53 1e-05
CP000481_1165(CP000481|pid:none) Acidothermus cellulolyticus 11B... 53 1e-05
CP001229_570(CP001229|pid:none) Sulfurihydrogenibium azorense Az... 51 4e-05
CP001230_338(CP001230|pid:none) Persephonella marina EX-H1, comp... 51 4e-05
T32867(T32867)hypothetical protein ZK484.6 - Caenorhabditis eleg... 51 5e-05
AM920431_1473(AM920431|pid:none) Penicillium chrysogenum Wiscons... 47 6e-05
BC069511_1(BC069511|pid:none) Homo sapiens ubiquitin associated ... 49 2e-04
AL138646_9(AL138646|pid:none) Arabidopsis thaliana DNA chromosom... 49 2e-04
AE014297_3570(AE014297|pid:none) Drosophila melanogaster chromos... 49 3e-04
AF521702_1(AF521702|pid:none) Homo sapiens T-cell ubiquitin liga... 49 3e-04
(P57075) RecName: Full=Ubiquitin-associated and SH3 domain-conta... 49 3e-04
(Q9VCE9) RecName: Full=Protein UBASH3A homolog; &AE014297_3571(... 49 3e-04
BC069357_1(BC069357|pid:none) Homo sapiens ubiquitin associated ... 49 3e-04
AE014297_3572(AE014297|pid:none) Drosophila melanogaster chromos... 49 3e-04
CP000001_1825(CP000001|pid:none) Bacillus cereus E33L, complete ... 48 4e-04
AL138646_10(AL138646|pid:none) Arabidopsis thaliana DNA chromoso... 47 7e-04
AE017355_1831(AE017355|pid:none) Bacillus thuringiensis serovar ... 47 7e-04
CP001080_1453(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP... 47 7e-04
CT005248_69(CT005248|pid:none) Leishmania major strain Friedlin,... 47 7e-04
(A4W6B3) RecName: Full=Probable phosphoglycerate mutase gpmB; ... 47 0.001
CP000903_1857(CP000903|pid:none) Bacillus weihenstephanensis KBA... 46 0.001
(A6TI09) RecName: Full=Probable phosphoglycerate mutase gpmB; ... 46 0.001
AM502227_61(AM502227|pid:none) Leishmania infantum chromosome 9. 46 0.001
AP006725_725(AP006725|pid:none) Klebsiella pneumoniae NTUH-K2044... 46 0.001
CP001177_1975(CP001177|pid:none) Bacillus cereus AH187, complete... 46 0.001
CP000485_1704(CP000485|pid:none) Bacillus thuringiensis str. Al ... 46 0.002
(A9MR94) RecName: Full=Probable phosphoglycerate mutase gpmB; ... 46 0.002
CP001186_1894(CP001186|pid:none) Bacillus cereus G9842, complete... 45 0.002
CP001080_108(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1... 45 0.002
AE015927_2371(AE015927|pid:none) Clostridium tetani E88, complet... 45 0.002
CP000481_899(CP000481|pid:none) Acidothermus cellulolyticus 11B ... 45 0.002
(Q8Z0T4) RecName: Full=Probable phosphoglycerate mutase gpmB; ... 45 0.003
(A1AJW4) RecName: Full=Probable phosphoglycerate mutase gpmB; ... 44 0.005
AM269991_26(AM269991|pid:none) Aspergillus niger contig An01c045... 37 0.005
AL138646_11(AL138646|pid:none) Arabidopsis thaliana DNA chromoso... 43 0.011
CP000909_1614(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 43 0.011
AB107356_1(AB107356|pid:none) Bombyx mori mRNA for ecdysteroid-p... 43 0.011
CP000088_1830(CP000088|pid:none) Thermobifida fusca YX, complete... 43 0.011
AM502231_42(AM502231|pid:none) Leishmania infantum chromosome 13. 43 0.014
(A4TQH5) RecName: Full=Probable phosphoglycerate mutase gpmB; ... 43 0.014
(B7LNT7) RecName: Full=Probable phosphoglycerate mutase gpmB; ... 43 0.014
CP001068_365(CP001068|pid:none) Ralstonia pickettii 12J chromoso... 42 0.018
AP006618_2944(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 42 0.018
AM437289_1(AM437289|pid:none) Vitis vinifera contig VV78X017796.... 42 0.024
CP001337_1642(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 42 0.024
AM180088_2597(AM180088|pid:none) Haloquadratum walsbyi DSM 16790... 42 0.024
CP000480_6132(CP000480|pid:none) Mycobacterium smegmatis str. MC... 42 0.024
CP000388_1129(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 42 0.024
(Q57G26) RecName: Full=Probable phosphoglycerate mutase gpmB; ... 42 0.024
CP000656_1189(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 42 0.032
CP001600_589(CP001600|pid:none) Edwardsiella ictaluri 93-146, co... 42 0.032
AM494946_58(AM494946|pid:none) Leishmania braziliensis chromosom... 41 0.041
AM494950_31(AM494950|pid:none) Leishmania braziliensis chromosom... 41 0.041
CP000771_361(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 41 0.041
AP009049_152(AP009049|pid:none) Clostridium kluyveri NBRC 12016 ... 40 0.070
CP001298_1416(CP001298|pid:none) Methylobacterium chloromethanic... 40 0.070
CP001022_2962(CP001022|pid:none) Exiguobacterium sibiricum 255-1... 40 0.070
CP000387_1916(CP000387|pid:none) Streptococcus sanguinis SK36, c... 40 0.070
CP000725_386(CP000725|pid:none) Streptococcus gordonii str. Chal... 40 0.092
CP000920_269(CP000920|pid:none) Streptococcus pneumoniae P1031, ... 40 0.12
AE007317_219(AE007317|pid:none) Streptococcus pneumoniae R6, com... 40 0.12
AC159455_18(AC159455|pid:none) Trypanosoma brucei chromosome 5 c... 40 0.12
CP001033_247(CP001033|pid:none) Streptococcus pneumoniae CGSP14,... 40 0.12
CP000410_206(CP000410|pid:none) Streptococcus pneumoniae D39, co... 40 0.12
CP000730_382(CP000730|pid:none) Staphylococcus aureus subsp. aur... 39 0.16
CP000919_234(CP000919|pid:none) Streptococcus pneumoniae JJA, co... 39 0.16
CR522870_2740(CR522870|pid:none) Desulfotalea psychrophila LSv54... 39 0.16
CP000721_2758(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 39 0.16
AM295250_1689(AM295250|pid:none) Staphylococcus carnosus subsp. ... 39 0.16
CP000975_315(CP000975|pid:none) Methylacidiphilum infernorum V4,... 39 0.20
CP000027_1375(CP000027|pid:none) Dehalococcoides ethenogenes 195... 39 0.20
CP000479_299(CP000479|pid:none) Mycobacterium avium 104, complet... 39 0.20
AE005176_1714(AE005176|pid:none) Lactococcus lactis subsp. lacti... 39 0.20
CP000612_1877(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 39 0.20
AE016958_269(AE016958|pid:none) Mycobacterium avium subsp. parat... 39 0.20
CP000679_1857(CP000679|pid:none) Caldicellulosiruptor saccharoly... 39 0.27
(Q5UQ52) RecName: Full=Uncharacterized phosphoglycerate mutase f... 38 0.35
AL935254_181(AL935254|pid:none) Lactobacillus plantarum strain W... 38 0.35
AP011115_3548(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 38 0.35
A70471(A70471) phosphoglycerate mutase 1 - Aquifex aeolicus &AE... 38 0.35
AP007151_381(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 38 0.35
CP000806_3434(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 38 0.45
CR936503_804(CR936503|pid:none) Lactobacillus sakei strain 23K c... 38 0.45
BA000033_351(BA000033|pid:none) Staphylococcus aureus subsp. aur... 38 0.45
BX248358_303(BX248358|pid:none) Corynebacterium diphtheriae grav... 37 0.59
CR543861_1267(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 37 0.59
CP000431_1172(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 37 0.59
AE017283_800(AE017283|pid:none) Propionibacterium acnes KPA17120... 37 0.59
CP000023_109(CP000023|pid:none) Streptococcus thermophilus LMG 1... 37 0.78
CP000943_2523(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 37 0.78
CP001331_385(CP001331|pid:none) Micromonas sp. RCC299 chromosome... 37 0.78
AE017333_1031(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 37 0.78
BA000030_5884(BA000030|pid:none) Streptomyces avermitilis MA-468... 37 1.0
DQ248872_1(DQ248872|pid:none) Corynebacterium glutamicum phospho... 37 1.0
EU972517_1(EU972517|pid:none) Zea mays clone 382606 hypothetical... 36 1.3
CP000667_4044(CP000667|pid:none) Salinispora tropica CNB-440, co... 36 1.3
CP000557_1309(CP000557|pid:none) Geobacillus thermodenitrificans... 36 1.3
CP001078_3056(CP001078|pid:none) Clostridium botulinum E3 str. A... 36 1.3
AP007174_391(AP007174|pid:none) Aspergillus oryzae RIB40 genomic... 36 1.3
BA000031_1307(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22... 36 1.3
CP000699_3532(CP000699|pid:none) Sphingomonas wittichii RW1, com... 36 1.3
(O14274) RecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; E... 36 1.3
FM204884_1600(FM204884|pid:none) Streptococcus equi subsp. zooep... 36 1.3
CP001056_3315(CP001056|pid:none) Clostridium botulinum B str. Ek... 36 1.3
AM406671_1854(AM406671|pid:none) Lactococcus lactis subsp. cremo... 36 1.3
AM270177_5(AM270177|pid:none) Aspergillus niger contig An08c0220... 36 1.7
CP001339_628(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, c... 36 1.7
AM920437_31(AM920437|pid:none) Penicillium chrysogenum Wisconsin... 36 1.7
AE015929_2364(AE015929|pid:none) Staphylococcus epidermidis ATCC... 36 1.7
CP000139_1814(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 36 1.7
CP000474_4026(CP000474|pid:none) Arthrobacter aurescens TC1, com... 35 2.3
CP000029_51(CP000029|pid:none) Staphylococcus epidermidis RP62A,... 35 2.3
CP000820_3934(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 35 2.3
CP000875_3384(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 35 2.3
CP000142_248(CP000142|pid:none) Pelobacter carbinolicus DSM 2380... 35 2.3
CP000875_41(CP000875|pid:none) Herpetosiphon aurantiacus ATCC 23... 35 2.3
BA000002_1615(BA000002|pid:none) Aeropyrum pernix K1 DNA, comple... 35 2.3
D72480(D72480)phosphohistidine phosphatase (EC 3.1.3.-) sixA-rel... 35 2.3
AM942444_233(AM942444|pid:none) Corynebacterium urealyticum DSM ... 35 2.3
CP000478_235(CP000478|pid:none) Syntrophobacter fumaroxidans MPO... 35 2.9
EU972765_1(EU972765|pid:none) Zea mays clone 387445 unknown mRNA. 35 2.9
CU468230_1750(CU468230|pid:none) Acinetobacter baumannii str. SD... 35 2.9
CU459141_1921(CU459141|pid:none) Acinetobacter baumannii str. AY... 35 2.9
AK143203_1(AK143203|pid:none) Mus musculus 0 day neonate eyeball... 35 2.9
CP000724_3499(CP000724|pid:none) Alkaliphilus metalliredigens QY... 35 2.9
CP000058_3524(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 35 2.9
CP000394_2335(CP000394|pid:none) Granulibacter bethesdensis CGDN... 35 2.9
CP000521_1777(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 35 2.9
AL807811_13(AL807811|pid:none) Mouse DNA sequence from clone RP2... 35 2.9
CP000388_1125(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 35 2.9
CP000033_775(CP000033|pid:none) Lactobacillus acidophilus NCFM, ... 32 3.2
AJ271801_1(AJ271801|pid:none) Mus musculus mRNA for aflatoxin B1... 35 3.9
AP007164_761(AP007164|pid:none) Aspergillus oryzae RIB40 genomic... 35 3.9
CP001108_2109(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 35 3.9
AJ938182_326(AJ938182|pid:none) Staphylococcus aureus RF122 comp... 35 3.9
AP007151_930(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 35 3.9
BC031857_1(BC031857|pid:none) Mus musculus aldo-keto reductase f... 35 3.9
CP000686_978(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 35 3.9
CP000075_3672(CP000075|pid:none) Pseudomonas syringae pv. syring... 34 5.0
AF389083_2(AF389083|pid:none) Streptococcus suis putative phosph... 34 5.0
(P52086) RecName: Full=Alpha-ribazole phosphatase; EC=3... 34 5.0
CU928160_599(CU928160|pid:none) Escherichia coli IAI1 chromosome... 34 5.0
CP001349_127(CP001349|pid:none) Methylobacterium nodulans ORS 20... 34 5.0
CP001348_612(CP001348|pid:none) Clostridium cellulolyticum H10, ... 34 5.0
AE017261_1423(AE017261|pid:none) Picrophilus torridus DSM 9790, ... 34 5.0
CP000407_291(CP000407|pid:none) Streptococcus suis 05ZYH33, comp... 34 5.0
AB037424_1(AB037424|pid:none) Rattus norvegicus aiar mRNA for an... 34 5.0
CP000511_852(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1,... 34 5.0
(Q8CG45) RecName: Full=Aflatoxin B1 aldehyde reductase member 2;... 34 5.0
CU928163_720(CU928163|pid:none) Escherichia coli UMN026 chromoso... 34 5.0
U82598_111(U82598|pid:none) Escherichia coli genomic sequence of... 34 5.0
CP000850_4355(CP000850|pid:none) Salinispora arenicola CNS-205, ... 34 5.0
(Q9NQ88) RecName: Full=Probable fructose-2,6-bisphosphatase TIGA... 34 6.6
CP000514_267(CP000514|pid:none) Marinobacter aquaeolei VT8, comp... 34 6.6
CU928164_608(CU928164|pid:none) Escherichia coli IAI39 chromosom... 34 6.6
AB023511_1(AB023511|pid:none) Drosophila melanogaster mRNA for 6... 34 6.6
CP001341_2067(CP001341|pid:none) Arthrobacter chlorophenolicus A... 34 6.6
CP001357_1328(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 34 6.6
AB023510_1(AB023510|pid:none) Drosophila melanogaster mRNA for 6... 34 6.6
AF525358_1(AF525358|pid:none) Mus musculus aldo-keto reductase (... 34 6.6
BT082084_1(BT082084|pid:none) Drosophila melanogaster MIP03150 f... 34 6.6
AE015924_1298(AE015924|pid:none) Porphyromonas gingivalis W83, c... 34 6.6
FM180568_538(FM180568|pid:none) Escherichia coli 0127:H6 E2348/6... 34 6.6
CP001145_1252(CP001145|pid:none) Coprothermobacter proteolyticus... 34 6.6
AX971854_1(AX971854|pid:none) Sequence 2657 from Patent EP1104808. 34 6.6
BA000022_2408(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 34 6.6
CP000682_771(CP000682|pid:none) Metallosphaera sedula DSM 5348, ... 33 8.6
CP001283_1706(CP001283|pid:none) Bacillus cereus AH820, complete... 33 8.6
CP001287_2684(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 33 8.6
AM849034_2674(AM849034|pid:none) Clavibacter michiganensis subsp... 33 8.6
AM406671_1545(AM406671|pid:none) Lactococcus lactis subsp. cremo... 33 8.6
CP000408_2033(CP000408|pid:none) Streptococcus suis 98HAH33, com... 33 8.6
AE005674_643(AE005674|pid:none) Shigella flexneri 2a str. 301, c... 33 8.6
CP000576_542(CP000576|pid:none) Prochlorococcus marinus str. MIT... 33 8.6
CU928162_616(CU928162|pid:none) Escherichia coli ED1a chromosome... 33 8.6
>CR382132_938(CR382132|pid:none) Yarrowia lipolytica strain CLIB122
chromosome F complete sequence.
Length = 421
Score = 85.5 bits (210), Expect(2) = 2e-29
Identities = 57/150 (38%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
Frame = +1
Query: 43 TVYLTRHGLREDWINK--LWRSTALRPSDPPLSARGFHIAKELGIFSKTLG--LKHIISS 210
T+Y+TRHG R +W+ + S SDP L+ +G AKELG + K + ++ I +S
Sbjct: 4 TIYITRHGFRANWLTDQPIPPSPTGIESDPALAEKGVVQAKELGEYLKDIKPPIQRIYAS 63
Query: 211 PMERCIQTSTAIADELDLPIKIDYGVIEWVGSDPRPDDILNPLSNEELKLKYPRIDLDYK 390
P RCI+T+T AD LDL I + G EW + P SN LK +PR+D +Y
Sbjct: 64 PFYRCIETATPTADHLDLAIYPEGGCGEWFKRERSSHP--KPASNAVLKGFFPRVDKNYN 121
Query: 391 STTNNIPTKESIEELHERTKISVDQIIGKV 480
S E ELHERTK ++ +I K+
Sbjct: 122 SLVVAGDDGEDEAELHERTKRFLNVLIEKL 151
Score = 67.4 bits (163), Expect(2) = 2e-29
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Frame = +2
Query: 470 LEKFKDDGP----IIIVSHAATMIALGRGILNDNNAPLRSGVCSLSKFNFNTTE---NKW 628
+EK + P I+IVSHAA IALGR ++ DN+ +R+GVCSL F + +W
Sbjct: 148 IEKLNKEEPEIETILIVSHAAPRIALGRALVGDNSLDIRTGVCSLDTFEVDKEGGLCGEW 207
Query: 629 ELEYTGKSDFMEDGEQSHWTFKRP 700
+L+ +G+ D++ +GE HW F P
Sbjct: 208 KLKSSGQVDYLSEGEVMHWGFDVP 231
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,112,676,507
Number of extensions: 21050240
Number of successful extensions: 52523
Number of sequences better than 10.0: 201
Number of HSP's gapped: 52435
Number of HSP's successfully gapped: 221
Length of query: 273
Length of database: 1,040,966,779
Length adjustment: 126
Effective length of query: 147
Effective length of database: 637,226,869
Effective search space: 93672349743
Effective search space used: 93672349743
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home