Dictyostelium discoideum cDNA Contig-U06402-1

Assembled

Chromosomal Location of Contig-U06402-1

Sequence Contig-U06402-1

AGAGAATTAA AAAAAAACAT ACACAAATAA TTAAAAAAAA TGACAGTTTA
TTTAACAAGA CATGGTTTAA GAGAGGATTG GATTAATAAA TTATGGAGAT
CTACAGCATT AAGACCATCA GATCCACCTT TATCGGCACG TGGATTTCAT
ATAGCTAAAG AGTTGGGTAT TTTCAGTAAA ACTTTAGGAT TAAAACATAT
TATATCATCA CCAATGGAGA GATGTATTCA AACAAGTACA GCAATAGCTG
ATGAATTAGA TTTGCCAATT AAAATTGATT ATGGTGTTAT TGAATGGGTT
GGTTCTGATC CAAGACCTGA TGATATTTTA AATCCACTTT CAAATGAGGA
ATTAAAATTA AAATATCCAA GAATTGATTT AGATTATAAA TCAACAACAA
ATAATATACC AACAAAAGAA TCAATTGAAG AATTACATGA AAGAACAAAG
ATATCAGTTG ATCAAATCAT TGGAAAAGTT TAAAGATGAT GGACCAATCA
TTATCGTTTC TCATGCCGCT ACAATGATTG CTTTAGGTAG AGGTATTTTA
AATGATAATA ATGCACCATT AAGATCTGGT GTTTGTAGTT TATCCAAATT
TAATTTTAAT ACTACAGAAA ATAAATGGGA ACTTGAATAT ACTGGTAAAT
CTGATTTCAT GGAAGATGGA GAACAATCTC ATTGGACTTT TAAACGTCCA
GTAATTGAAA AATCTTAATA ATAATAATTA TAAAATAAAA ATTGTAGTAA
TAAAAAAAAA AAAAAAAAAA ATAAATAATA TTATTATTTA TTTTTTAAAA
AAAAAAAAAA AAAAAAAAA

Translated Amino Acid Sequence Contig-U06402-1

relkknihk*LKKMTVYLTRHGLREDWINKLWRSTALRPSDPPLSARGFHIAKELGIFSK
TLGLKHIISSPMERCIQTSTAIADELDLPIKIDYGVIEWVGSDPRPDDILNPLSNEELKL
KYPRIDLDYKSTTNNIPTKESIEELHERTKISVDQIIGKV*r*wtnhyrfscryndcfr*
ryfk***ctikiwcl*fiqi*f*yyrk*mgt*iyw*i*fhgrwrtisldf*tssn*kili
iiiik*kl***kkkkkk*iillfif*kkkkkkk

Homology Contig-U06402-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U06402-1 (Contig-U06402-1Q) /CSM_Contig/Conti...  1310  0.0
Contig-U09491-1 (Contig-U09491-1Q) /CSM_Contig/Conti...    44  2e-04
Contig-U14081-1 (Contig-U14081-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U05833-1 (Contig-U05833-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U14805-1 (Contig-U14805-1Q) /CSM_Contig/Conti...    38  0.015
Contig-U12805-1 (Contig-U12805-1Q) /CSM_Contig/Conti...    38  0.015
Contig-U11758-1 (Contig-U11758-1Q) /CSM_Contig/Conti...    38  0.015
Contig-U10616-1 (Contig-U10616-1Q) /CSM_Contig/Conti...    38  0.015
Contig-U04077-1 (Contig-U04077-1Q) /CSM_Contig/Conti...    38  0.015
Contig-U14791-1 (Contig-U14791-1Q) /CSM_Contig/Conti...    36  0.058

Homology Contig-U06402-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU263573) Dictyostelium discoideum vegetative cDNA clone:VS...   856   0.0    4
(AU268864) Dictyostelium discoideum vegetative cDNA clone:VS...   781   0.0    2
(AU262243) Dictyostelium discoideum vegetative cDNA clone:VS...   609   0.0    3
(AU263053) Dictyostelium discoideum vegetative cDNA clone:VS...   638   0.0    2
(AU263572) Dictyostelium discoideum vegetative cDNA clone:VS...   856   0.0    3
(AU268863) Dictyostelium discoideum vegetative cDNA clone:VS...   908   0.0    2
(CP000439) Francisella tularensis subsp. novicida U112, comp...    50   0.14   1
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595...    32   0.30   8
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    36   0.38   9
(EK323791) 1095462438055 Global-Ocean-Sampling_GS-31-01-01-1...    36   0.40   2

Homology Contig-U06402-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


CR382132_938(CR382132|pid:none) Yarrowia lipolytica strain CLIB1...    86   2e-29
FM992694_149(FM992694|pid:none) Candida dubliniensis CD36 chromo...    63   1e-20
AP006852_153(AP006852|pid:none) Candida albicans genomic DNA, ch...    60   9e-20
AX023756_1(AX023756|pid:none) Sequence 13 from Patent EP0999284.       60   9e-20
CP000497_570(CP000497|pid:none) Pichia stipitis CBS 6054 chromos...    63   1e-19
CU928174_411(CU928174|pid:none) Zygosaccharomyces rouxii strain ...    74   1e-18
(P53929) RecName: Full=Uncharacterized protein YNL108C;  &CS5595...    60   2e-17
FN392322_389(FN392322|pid:none) Pichia pastoris GS115 chromosome...    60   3e-17
CR380955_116(CR380955|pid:none) Candida glabrata strain CBS138 c...    68   3e-17
AE016819_10(AE016819|pid:none) Ashbya gossypii (= Eremothecium g...    55   3e-16