Dictyostelium discoideum cDNA Contig-U05709-1

Assembled

Chromosomal Location of Contig-U05709-1

Sequence Contig-U05709-1

AAAAAAAAAA AAAAAAAAAA AACAATAATC AAATGAATAA TAATAATAAT
AATAATAATA TTTTAGAAAA TGATATCGAT ATGATAGATG TAGATATTAA
TAATTTTAAC GATGATATTA ACCTACTGCA GCAAACTAAT ATTTACACAA
ATGATATACT TTTTATAAAC CATTTAAATG AATGGATATA CAATGTATCT
ATAATAAAAG ATACATTAAA TCAAATTAAT ACTAAAAATA CAAGACTACA
TTTAATTTTA ATAAATACTG ATTTATCAAG TATTGAATCA ATTAGTAACA
TATTATCAAA ATATTATAGT ATACTTAGTA ATTATNCAAT AAATCAATAT
TTTAAATTAA ATATAGATTG TATAATAATA TTACCAGAAT TATATTATAA
CTACAATGAT GGTGATGATC AAAATTTTCA AAATGAAAAT AATAATAATA
ATAACGAGAT AGAATTATTT TTAAATTCAA TAGAATTAAT ATTTAATAGT
TTTAATAACA CTTTAAATAA AATTTATATA CCAAATGATA TAAATAATAA
AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAA

Translated Amino Acid Sequence Contig-U05709-1

KKKKKKNNNQMNNNNNNNNILENDIDMIDVDINNFNDDINLLQQTNIYTNDILFINHLNE
WIYNVSIIKDTLNQINTKNTRLHLILINTDLSSIESISNILSKYYSILSNYXINQYFKLN
IDCIIILPELYYNYNDGDDQNFQNENNNNNNEIELFLNSIELIFNSFNNTLNKIYIPNDI
NNKKKKKKKKKKKKKKK

Homology Contig-U05709-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U05709-1 (Contig-U05709-1Q) /CSM_Contig/Conti...   741  0.0
Contig-U10383-1 (Contig-U10383-1Q) /CSM_Contig/Conti...    36  0.041
Contig-U08192-1 (Contig-U08192-1Q) /CSM_Contig/Conti...    36  0.041
Contig-U12425-1 (Contig-U12425-1Q) /CSM_Contig/Conti...    34  0.16
Contig-U12334-1 (Contig-U12334-1Q) /CSM_Contig/Conti...    34  0.16
Contig-U12148-1 (Contig-U12148-1Q) /CSM_Contig/Conti...    34  0.16
Contig-U11084-1 (Contig-U11084-1Q) /CSM_Contig/Conti...    34  0.16
Contig-U11045-1 (Contig-U11045-1Q) /CSM_Contig/Conti...    34  0.16
Contig-U09395-1 (Contig-U09395-1Q) /CSM_Contig/Conti...    34  0.16
Contig-U08778-1 (Contig-U08778-1Q) /CSM_Contig/Conti...    34  0.16

Homology Contig-U05709-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(C94299) Dictyostelium discoideum slug cDNA, clone SSK759.        329   1e-95  2
(AU074453) Dictyostelium discoideum slug cDNA, clone SSK759.      260   6e-65  1
(AP009020) Bombyx mori genomic DNA, chromosome 19, BAC clone...    44   0.097  2
(DE339822) Bombyx mori genomic DNA, BAC clone:BET_032_D04.         42   0.12   2
(DE299314) Bombyx mori genomic DNA, BAC clone:BES_051_G07.         42   0.16   2
(DE371537) Bombyx mori genomic DNA, BAC clone:BET_633_F21.         42   0.19   2
(AC161844) Bos taurus clone CH240-101B7, WORKING DRAFT SEQUE...    34   0.23   2
(AC179099) Strongylocentrotus purpuratus clone R3-4011C1, WO...    34   0.23   2
(AC175642) Loxodonta africana clone VMRC15-221K23, WORKING D...    34   0.23   2
(AC201595) Strongylocentrotus purpuratus clone R3-42O1, WORK...    34   0.24   2

Homology Contig-U05709-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AY812065_1(AY812065|pid:none) Schistosoma japonicum SJCHGC09327 ...    33   5.8
CP001279_1604(CP001279|pid:none) Nautilia profundicola AmH, comp...    32   9.9