Dictyostelium discoideum cDNA Contig-U05703-1

Assembled

Chromosomal Location of Contig-U05703-1

Sequence Contig-U05703-1

CGAAAAAATA AATAAAAAAA ATAAATTATT TAATATTATT TCAAAAAAAA
AAAATAAAAA AAAAAAATAA AAAAATAATG GATTATTTAA ATGAAATTAA
TAATAATAAT GAAATTTTCT CATATAAAAA ATTAATTAAT GGTCATAAAT
ATAATATNTA ATTTTTATTA ATTCATAAAT TGAAATTAAA AAAAGATTTT
CAATTAAAAA CTTTGGATGA TATTGCATTT CTACAAAAAA GTTTGTTGAA
GAATTACCAT ATAATAATTT TGACCTTTGT CATGGTATTG ATGAATGGGG
ATTAGATTAT ATTGTTAAAA GATTACTAAT TGATGGTGAG GGTGGTATTT
GTACAACATT AAATATTGGT ATGTTTCTTT ATGAATTTGG AATTCCAGTT
AGATTGATTA AAGCATATAA ACAATCACAA TTTAATATAG TTCCACATTT
TTCATGCCAC ATTTCAAATT TAATTCAATG GCCATTAAAT AGTAAATGGT
ATATGGTTGA AGTTGGAATT GGTTTCTTTG GTTCATTAAA TCCAATTGAA
TTGGGTAATG AAATTGGTGT TTTATCAAAT GCTGGCAATC ACTCCTACTA
TCGTTGTATT GAGAATTCAG ATGATTCATC ATACATTTAT CAAGAGAAAG
AAAAAACCTG GCATGGATAG TTATTTAAAT TTATTTCAAT TCAGTTCAAG
TGAAATTACT CATGGTGAAA TTTTAGATTG TCACCAACGT TACCTTGAAA
TTACAGAGAA AAAATTATTT TCATTTTTAA AATTTGAAAA AGGTTATTAC
TATTTTCACC ATGATTGTTT AAAAATTGGT TTCCTAGATG GAAAAGAAAA
TACTATTACA ATTACTGATC AATATCAATT AAAAAAATTA TTATTAAATT
ATTTTAAAAT TAATTTAAAT GAAAATATAA AAAAACAAAT ATAAATTAAA
AAAAAAAAAT TAAAAAATAA AAAATAAAAT AAAAAAATAA TATTATTAAC
C

Translated Amino Acid Sequence Contig-U05703-1

ekinkknklfniiskkknkkkk*knnglfk*n*****nfli*kin*ws*i*yxifins*i
eikkrfsiknfg*YCISTKKFVEELPYNNFDLCHGIDEWGLDYIVKRLLIDGEGGICTTL
NIGMFLYEFGIPVRLIKAYKQSQFNIVPHFSCHISNLIQWPLNSKWYMVEVGIGFFGSLN
PIELGNEIGVLSNAGNHSYYRCIENSDDSSYIYQEKEKTWHG*lfkfisiqfk*nysw*n
frlsptlp*nyrekiififki*krlllfsp*lfknwfprwkrkyyyny*sisikkiiikl
f*n*fk*kykktnin*kkkikk*kik*knniin

Homology Contig-U05703-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U05703-1 (Contig-U05703-1Q) /CSM_Contig/Conti...  1352  0.0
Contig-U14382-1 (Contig-U14382-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U13620-1 (Contig-U13620-1Q) /CSM_Contig/Conti...    36  0.071
Contig-U13158-1 (Contig-U13158-1Q) /CSM_Contig/Conti...    36  0.071
Contig-U12914-1 (Contig-U12914-1Q) /CSM_Contig/Conti...    36  0.071
Contig-U11896-1 (Contig-U11896-1Q) /CSM_Contig/Conti...    36  0.071
Contig-U11659-1 (Contig-U11659-1Q) /CSM_Contig/Conti...    36  0.071
Contig-U11245-1 (Contig-U11245-1Q) /CSM_Contig/Conti...    36  0.071
Contig-U11123-1 (Contig-U11123-1Q) /CSM_Contig/Conti...    36  0.071

Homology Contig-U05703-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AC115581) Dictyostelium discoideum chromosome 2 map complem...   559   0.0    6
(C94026) Dictyostelium discoideum slug cDNA, clone SSK718.        559   0.0    4
(AU074440) Dictyostelium discoideum slug cDNA, clone SSK718.       92   5e-14  1
(CR405705) Zebrafish DNA sequence from clone DKEY-64E13 in l...    46   0.020  6
(CZ899750) fgma003d003e02t0 Soybean methylation filtered lib...    50   0.17   1
(CZ899730) fgma003d003b11t0 Soybean methylation filtered lib...    50   0.17   1
(CC063704) fgma003d003e02t0 fgma filtered library (LibID: 14...    50   0.17   1
(CC063685) fgma003d003b11t0 fgma filtered library (LibID: 14...    50   0.17   1
(AM857147) Crassostrea gigas EST, 5' end sequence, clone cDN...    50   0.17   1
(AM854672) Crassostrea gigas EST, 5' end sequence, clone cDN...    50   0.17   1

Homology Contig-U05703-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC115581_15(AC115581|pid:none) Dictyostelium discoideum chromoso...   297   3e-96
CP001176_3337(CP001176|pid:none) Bacillus cereus B4264, complete...    41   0.056
CP001186_3402(CP001186|pid:none) Bacillus cereus G9842, complete...    41   0.073
CP001407_3403(CP001407|pid:none) Bacillus cereus 03BB102, comple...    41   0.073
AE017194_3471(AE017194|pid:none) Bacillus cereus ATCC 10987, com...    41   0.073
AE017225_3258(AE017225|pid:none) Bacillus anthracis str. Sterne,...    40   0.096
CP000001_3173(CP000001|pid:none) Bacillus cereus E33L, complete ...    40   0.13
CP001283_3419(CP001283|pid:none) Bacillus cereus AH820, complete...    40   0.13
AE016877_3308(AE016877|pid:none) Bacillus cereus ATCC 14579, com...    40   0.16
CP000227_3192(CP000227|pid:none) Bacillus cereus Q1, complete ge...    40   0.16