<Clone: Contig-U05436-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Contig-U05436-1
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Assembled
Chromosomal Location of Contig-U05436-1
<
more Chromosomal info
>
| Chromosome Number |
2 |
| Length |
8467578 |
| Start Poin |
4,779,737 |
| End Point |
4,780,257 |
| Strand |
PLUS |
Sequence Contig-U05436-1
GAAATAATAA AAGAAAAAAT GTTTTTTTAT AAAATAATTT ATTTTATTGG
TTTTCCATAT ATTGTATTAA GATTAATAGT ATCAATAATT TTACCAATTG
CATCACTTTA TTTCATTTAT TGTAATTTCA TTGCACCAAA GTTACGTGAA
AAACCAGAAT CATCATATAA AAATAAAGTT GTAATTATTA CTGGTGCAAG
TTCAGGTATT GGTGCTGAAC TTGCTAAAAA ATATGCAAGA TTAGGTTGTA
AAGTTACAAT TGTAGCAAGA AGATTAGAAC AATTAGAAAA AGTAAAGTCA
AGTATTTTAA AGGACTATTC AAGAGTTAAT GATGATGATA TTTTAGTAAT
TAAAGGTGAT TTAACTTTAA TTGATGATTG CAAAAATATG GTTGAAAAAG
TTATTGAAAA ATGGTCAAAA ATTGATATTN GGGTTTGGAA TGCAGGATCA
GGATCATTGA TTGAATTTAG TAAACTTCAA GGTGATATTT CAATTTATAG
GGATAATATG GAATTAAATT
Translated Amino Acid Sequence Contig-U05436-1
<All Frames>
EIIKEKMFFYKIIYFIGFPYIVLRLIVSIILPIASLYFIYCNFIAPKLREKPESSYKNKV
VIITGASSGIGAELAKKYARLGCKVTIVARRLEQLEKVKSSILKDYSRVNDDDILVIKGD
LTLIDDCKNMVEKVIEKWSKIDIXVWNAGSGSLIEFSKLQGDISIYRDNMELN
Homology Contig-U05436-1 vs CSM-Contig
<more CONTIG info>
Sequences producing significant alignments: (bits) Value
Contig-U05436-1 (Contig-U05436-1Q) /CSM_Contig/Conti... 983 0.0
Contig-U03770-1 (Contig-U03770-1Q) /CSM_Contig/Conti... 38 0.009
Contig-U14558-1 (Contig-U14558-1Q) /CSM_Contig/Conti... 36 0.036
Contig-U13851-1 (Contig-U13851-1Q) /CSM_Contig/Conti... 36 0.036
Contig-U12685-1 (Contig-U12685-1Q) /CSM_Contig/Conti... 36 0.036
Contig-U12182-1 (Contig-U12182-1Q) /CSM_Contig/Conti... 36 0.036
Contig-U12034-1 (Contig-U12034-1Q) /CSM_Contig/Conti... 36 0.036
Contig-U00906-1 (Contig-U00906-1Q) /CSM_Contig/Conti... 36 0.036
Contig-U14465-1 (Contig-U14465-1Q) /CSM_Contig/Conti... 34 0.14
Contig-U14096-1 (Contig-U14096-1Q) /CSM_Contig/Conti... 34 0.14
Homology Contig-U05436-1 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 442 0.0 4
(AU073787) Dictyostelium discoideum slug cDNA, clone SSI368. 420 e-119 2
(AE014188) Plasmodium falciparum 3D7 chromosome 12, complete... 38 1e-06 12
(BA000032) Vibrio parahaemolyticus RIMD 2210633 DNA, chromos... 60 9e-05 1
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 34 0.005 9
(FF368963) TN-HCN-384-04-libF-F3-beads_L09 Trichoplusia ni w... 54 0.006 1
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 54 0.006 1
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 36 0.021 11
(EJ982032) 1093022161769 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.022 1
(EJ954850) 1093018967355 Global-Ocean-Sampling_GS-30-02-01-1... 52 0.022 1
Homology Contig-U05436-1 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
(Q8T197) RecName: Full=Dehydrogenase/reductase SDR family protei... 324 7e-88
HB438402_1(HB438402|pid:none) Sequence 1220 from Patent WO200907... 83 5e-15
BT041816_1(BT041816|pid:none) Zea mays full-length cDNA clone ZM... 83 5e-15
AB025619_15(AB025619|pid:none) Arabidopsis thaliana genomic DNA,... 82 1e-14
AP009153_3589(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 81 1e-14
AL096860_10(AL096860|pid:none) Arabidopsis thaliana DNA chromoso... 80 4e-14
HB438753_1(HB438753|pid:none) Sequence 1571 from Patent WO200907... 78 1e-13
CP000312_2480(CP000312|pid:none) Clostridium perfringens SM101, ... 76 4e-13
CP001251_384(CP001251|pid:none) Dictyoglomus turgidum DSM 6724, ... 76 4e-13
EU966000_1(EU966000|pid:none) Zea mays clone 290689 unknown mRNA. 76 6e-13
<Clone: Contig-U05436-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
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