Homology Contig-U05238-1 vs Protein
Query= Contig-U05238-1 (Contig-U05238-1Q) /CSM_Contig/Contig-U05238-1Q.Seq.d
(834 letters)
Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL844505_218(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 44 0.007
CP001056_1498(CP001056|pid:none) Clostridium botulinum B str. Ek... 40 0.095
AL844504_299(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.095
CP001078_1408(CP001078|pid:none) Clostridium botulinum E3 str. A... 40 0.095
CP000721_1300(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 40 0.12
CP000962_1666(CP000962|pid:none) Clostridium botulinum A3 str. L... 40 0.12
CP001581_1704(CP001581|pid:none) Clostridium botulinum A2 str. K... 40 0.12
CP001108_67(CP001108|pid:none) Prosthecochloris aestuarii DSM 27... 39 0.16
AL034559_42(AL034559|pid:none) Plasmodium falciparum MAL3P7, com... 39 0.16
AL929354_63(AL929354|pid:none) Plasmodium falciparum strain 3D7,... 39 0.21
CP000413_1299(CP000413|pid:none) Lactobacillus gasseri ATCC 3332... 39 0.28
AL844505_292(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 38 0.36
CR382401_38(CR382401|pid:none) Plasmodium falciparum chromosome ... 38 0.36
CP000462_2934(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 38 0.47
CP000853_1547(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 37 0.61
B71133(B71133) hypothetical protein PH0830 - Pyrococcus horikosh... 37 0.80
DQ088876_1(DQ088876|pid:none) Uncultured bacterium clone MEDeBAC... 37 0.80
AM412317_1975(AM412317|pid:none) Clostridium botulinum A str. AT... 37 0.80
CP000962_2042(CP000962|pid:none) Clostridium botulinum A3 str. L... 37 1.0
FM204884_194(FM204884|pid:none) Streptococcus equi subsp. zooepi... 37 1.0
FM178380_696(FM178380|pid:none) Aliivibrio salmonicida LFI1238 c... 37 1.0
AC116984_148(AC116984|pid:none) Dictyostelium discoideum chromos... 36 1.4
U89914_10(U89914|pid:none) Bacillus pseudofirmus hypothetical K+... 36 1.4
AE017226_1698(AE017226|pid:none) Treponema denticola ATCC 35405,... 36 1.8
AE005672_1553(AE005672|pid:none) Streptococcus pneumoniae TIGR4,... 35 2.3
CP000918_1592(CP000918|pid:none) Streptococcus pneumoniae 70585,... 35 2.3
AE007317_1486(AE007317|pid:none) Streptococcus pneumoniae R6, co... 35 2.3
CP000728_1941(CP000728|pid:none) Clostridium botulinum F str. La... 35 2.3
CP000936_1596(CP000936|pid:none) Streptococcus pneumoniae Hungar... 35 2.3
CP001098_1206(CP001098|pid:none) Halothermothrix orenii H 168, c... 35 2.3
CP000921_1462(CP000921|pid:none) Streptococcus pneumoniae Taiwan... 35 2.3
AE004092_855(AE004092|pid:none) Streptococcus pyogenes M1 GAS, c... 35 2.3
CP000482_1430(CP000482|pid:none) Pelobacter propionicus DSM 2379... 35 3.1
AE014187_324(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 35 3.1
CP000053_41(CP000053|pid:none) Rickettsia felis URRWXCal2, compl... 35 3.1
CP000021_460(CP000021|pid:none) Vibrio fischeri ES114 chromosome... 35 3.1
CP000724_2547(CP000724|pid:none) Alkaliphilus metalliredigens QY... 35 3.1
CP000939_1923(CP000939|pid:none) Clostridium botulinum B1 str. O... 35 3.1
CP000675_1235(CP000675|pid:none) Legionella pneumophila str. Cor... 35 3.1
AP010935_193(AP010935|pid:none) Streptococcus dysgalactiae subsp... 35 3.1
AE000666_864(AE000666|pid:none) Methanothermobacter thermautotro... 35 3.1
AL844504_298(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 35 4.0
CP000725_1187(CP000725|pid:none) Streptococcus gordonii str. Cha... 35 4.0
CP000725_1769(CP000725|pid:none) Streptococcus gordonii str. Cha... 35 4.0
CP000049_199(CP000049|pid:none) Borrelia turicatae 91E135, compl... 35 4.0
AP010935_832(AP010935|pid:none) Streptococcus dysgalactiae subsp... 34 5.2
AM180355_353(AM180355|pid:none) Clostridium difficile 630 comple... 34 5.2
CP000383_20(CP000383|pid:none) Cytophaga hutchinsonii ATCC 33406... 34 5.2
AY722941_2(AY722941|pid:none) Borrelia garinii PBi variable plas... 34 5.2
CP001614_1070(CP001614|pid:none) Teredinibacter turnerae T7901, ... 34 5.2
BX538351_11(BX538351|pid:none) Cryptosporidium parvum chromosome... 34 6.8
AL844509_211(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 34 6.8
AE009948_1291(AE009948|pid:none) Streptococcus agalactiae 2603V/... 34 6.8
CP000813_3443(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 34 6.8
CP000425_378(CP000425|pid:none) Lactococcus lactis subsp. cremor... 34 6.8
AF528097_47(AF528097|pid:none) Clostridium tetani E88 plasmid pE... 34 6.8
CP000422_1146(CP000422|pid:none) Pediococcus pentosaceus ATCC 25... 34 6.8
AM406671_378(AM406671|pid:none) Lactococcus lactis subsp. cremor... 34 6.8
AL844503_164(AL844503|pid:none) Plasmodium falciparum 3D7 chromo... 33 8.9
AE017354_1092(AE017354|pid:none) Legionella pneumophila subsp. p... 33 8.9
AE005176_362(AE005176|pid:none) Lactococcus lactis subsp. lactis... 33 8.9
AE016830_2492(AE016830|pid:none) Enterococcus faecalis V583, com... 33 8.9
AE001437_632(AE001437|pid:none) Clostridium acetobutylicum ATCC ... 33 8.9
CP000725_480(CP000725|pid:none) Streptococcus gordonii str. Chal... 33 8.9
DQ489736_1170(DQ489736|pid:none) Leuconostoc citreum KM20, compl... 33 8.9
AJ810804_1(AJ810804|pid:none) Lactobacillus sanfranciscensis gdh... 33 8.9
CP001175_594(CP001175|pid:none) Listeria monocytogenes HCC23, co... 33 8.9
CP001581_2062(CP001581|pid:none) Clostridium botulinum A2 str. K... 33 8.9
FN357345_16(FN357345|pid:none) Schistosoma mansoni genome sequen... 33 8.9
AE008691_606(AE008691|pid:none) Thermoanaerobacter tengcongensis... 33 8.9
>AL844505_218(AL844505|pid:none) Plasmodium falciparum 3D7
chromosome 6. &CR382400_52(CR382400|pid:none)
Length = 834
Score = 43.9 bits (102), Expect = 0.007
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 3/167 (1%)
Frame = +2
Query: 176 YSKNYSKPIYSN---IIEKNGNNESIIYYYDYTELIRKELQIELNKFLIYLEKSIPNQYL 346
Y K K + N +++K G ++ + Y ++I KE+ +++NKF Y K + Y
Sbjct: 29 YKKKLEKDLVQNTVKMVDKQGMK--MLPPFLYNDIISKEI-VKINKFAEYKYKEVI--YN 83
Query: 347 YKPIYSRVKTIESMKRKEISYIAGKIVHWFQIFDQCGISMIINPNYKTSFIIEKLKELEL 526
K IY +K IE K+KEI+ N N + EK
Sbjct: 84 LKNIYYTLKQIERDKKKEIN----------------------NNNNNNNICTEK------ 115
Query: 527 NGYFKIIEIERKSDLYGYRAYHVDIEFGEEIKIEIQIRSVYEDIFNI 667
Y + IE+K D+ G H+D + KI +++ ++ + NI
Sbjct: 116 -DYINMECIEKKLDIIGNDIIHIDFYIHKNCKIIMKLGFFFDKVMNI 161
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 998,505,589
Number of extensions: 16951732
Number of successful extensions: 44578
Number of sequences better than 10.0: 70
Number of HSP's gapped: 44515
Number of HSP's successfully gapped: 70
Length of query: 278
Length of database: 1,061,185,681
Length adjustment: 127
Effective length of query: 151
Effective length of database: 646,092,785
Effective search space: 97560010535
Effective search space used: 97560010535
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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