<Clone: Contig-U05231-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Contig-U05231-1
Dictyostelium discoideum cDNA Project Home
Assembled
Chromosomal Location of Contig-U05231-1
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more Chromosomal info
>
| Chromosome Number |
3 |
| Length |
6358359 |
| Start Poin |
5,577,362 |
| End Point |
5,578,085 |
| Strand |
PLUS |
Sequence Contig-U05231-1
AAAAGTTTAA AAAAAAATAA AAAATAAAAA AAGACCAAAG TTATAAATAT
ATTTAAAAAT AAAAATAAAA ACTTTATAAA AATATCTAAA GAAATAAAAA
AAAATAAAAT AAAATGACAT TCTTGAGTAA AAAACCTCAA ATATTTAAAA
ATATTGAAAA AGATATAAAT AAAATAAAAT TTAAAAAATC AAATAAAATA
AAATCAGATT GTAATAATAG TAATAATAAA AATGGTTTGA TAGAGTGTAT
ATCAACTTTA GAAGATGATA ATCCATGGGA TGTTTATACC AAAATAATGA
AAGAAGAAGG ATTTTTAAAA AGTTGTATAT TAGATTTAAA TGATGGTGAA
GTTAATAGTA GTAGTGGTGC ATCACCATTA AATGTTGCAT ACCAAGAATA
CCAAGAAATT AAAAATATTT TGGAAGGTAA TAATTCAATT TATATAAATT
GTGACTCAAC TAGATTCCAA ATTCAANTGA CATAATGATT ACTGGTATAA
GTTCAAATTC ATTATCATTC ATATTACGAA GAACTGCAAA TAAATGTATT
ATTGGAAATT TTCCAACCTT CAACAATTCT AGTCGACCAT GCTCATTGTA
AAGTCTCTGA TATTTATAAT AAAATTACAA ATTTTGATAA AAATGAAAGA
ATTACAAATT TAATTTTTTC ATTCTCCGAA GATAGTATAA AAAATATTGT
AAATTAAAAA AAAAAA
Translated Amino Acid Sequence Contig-U05231-1
<All Frames>
kfkkk*kikkdqsykyi*k*k*klykni*rnkkk*NKMTFLSKKPQIFKNIEKDINKIKF
KKSNKIKSDCNNSNNKNGLIECISTLEDDNPWDVYTKIMKEEGFLKSCILDLNDGEVNSS
SGASPLNVAYQEYQEIKNILEGNNSIYINCDSTRFQIQXT**llv*vqihyhsyyeelqi
nvlleifqpstilvdhahckvsdiynkitnfdkneritnlifsfsedsiknivn*kkk
Homology Contig-U05231-1 vs CSM-Contig
<more CONTIG info>
Sequences producing significant alignments: (bits) Value
Contig-U05231-1 (Contig-U05231-1Q) /CSM_Contig/Conti... 930 0.0
Contig-U06231-1 (Contig-U06231-1Q) /CSM_Contig/Conti... 42 8e-04
Contig-U06002-1 (Contig-U06002-1Q) /CSM_Contig/Conti... 38 0.013
Contig-U13002-1 (Contig-U13002-1Q) /CSM_Contig/Conti... 36 0.050
Contig-U09658-1 (Contig-U09658-1Q) /CSM_Contig/Conti... 36 0.050
Contig-U09530-1 (Contig-U09530-1Q) /CSM_Contig/Conti... 36 0.050
Contig-U09480-1 (Contig-U09480-1Q) /CSM_Contig/Conti... 36 0.050
Contig-U02225-1 (Contig-U02225-1Q) /CSM_Contig/Conti... 36 0.050
Contig-U11682-1 (Contig-U11682-1Q) /CSM_Contig/Conti... 34 0.20
Contig-U10780-1 (Contig-U10780-1Q) /CSM_Contig/Conti... 34 0.20
Homology Contig-U05231-1 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(C94111) Dictyostelium discoideum slug cDNA, clone SSG420. 167 2e-77 3
(AU261378) Dictyostelium discoideum vegetative cDNA clone:VS... 42 5e-04 2
(AC157209) Bos taurus clone CH240-46L12, WORKING DRAFT SEQUE... 54 0.008 1
(AC156191) Bos taurus clone CH240-48I4, WORKING DRAFT SEQUEN... 54 0.008 1
(AF228564) Mansonella ozzardi clone Mo9-3 18S ribosomal RNA ... 46 0.41 2
(AC121070) Sus scrofa clone RP44-299L10, WORKING DRAFT SEQUE... 48 0.48 1
(CU638827) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.48 1
(CP000885) Clostridium phytofermentans ISDg, complete genome. 48 0.48 1
(BH134395) ENTNE45TR Entamoeba histolytica Sheared DNA Entam... 38 0.51 3
(EJ201977) 1092344308854 Global-Ocean-Sampling_GS-27-01-01-1... 40 1.2 2
Homology Contig-U05231-1 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
AC116100_17(AC116100|pid:none) Dictyostelium discoideum chromoso... 45 0.002
CR382134_505(CR382134|pid:none) Debaryomyces hansenii strain CBS... 35 1.8
CR626927_3608(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 33 6.8
AP006841_3929(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 33 6.8
AL844505_40(AL844505|pid:none) Plasmodium falciparum 3D7 chromos... 33 8.8
AE016795_1892(AE016795|pid:none) Vibrio vulnificus CMCP6 chromos... 33 8.8
<Clone: Contig-U05231-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
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